RNA–Protein interactions for RNA: ENSMUST00000001701.3

Hoxc11-201, Transcript of Homeobox protein Hox-C11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc11, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11-201ENSMUST00000001701 Gm10251J3QPM5 127 aa12.8□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 Igkv4-58A0A0G2JGI6 119 aa12.79□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 2310034G01RikA0A286YDL3 209 aa12.79□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 Acyp1P56376 99 aa12.78□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 Pou2af1Q64693 256 aa12.78□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 Cdk2ap2Q9CPY4 127 aa12.78□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 Spata45Q9CVW4 97 aa12.78□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 Smim29Q8R043 75 aa12.78□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 5730596B20RikQ8BQ08 205 aa12.77□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 LbhQ9CX60 105 aa12.77□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 Fam168bQ80XQ8 194 aa12.76□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 TgO08710 2766 aa12.75□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 Wfdc6bF6ULY1 148 aa12.74□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 Ighv10-1A0A0B4J1J6 119 aa12.73□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 E130218I03RikA0A0U1RNU5 63 aa12.73□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 Gm10837Q3UTT8 145 aa12.73□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 Cd164Q9R0L9 197 aa12.73□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 Igkv3-2A0A075B5P0 119 aa12.72□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 Dnah9B1AR51 4484 aa12.72□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 Nupr2Q497P3 102 aa12.72□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 BC048502Q80Y74 154 aa12.72□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 Q9DAA7 145 aa12.72□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 Cdip1Q9DB75 208 aa12.72□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 Sigmar1O55242 223 aa12.71□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 Xlr5cQ9JJR2 179 aa12.71□□□□□ -0.37
Hoxc11-201ENSMUST00000001701 P84750 121 aa12.7□□□□□ -0.38
Hoxc11-201ENSMUST00000001701 Msrb1Q9JLC3 116 aa12.7□□□□□ -0.38
Hoxc11-201ENSMUST00000001701 Defa4P28311 92 aa12.68□□□□□ -0.38
Hoxc11-201ENSMUST00000001701 Igkv2-109A0A075B5K6 120 aa12.67□□□□□ -0.38
Hoxc11-201ENSMUST00000001701 Obox2E9PXV9 151 aa12.67□□□□□ -0.38
Hoxc11-201ENSMUST00000001701 Prol1E9PYQ4 312 aa12.67□□□□□ -0.38
Hoxc11-201ENSMUST00000001701 2310050C09RikG5E8Z3 280 aa12.67□□□□□ -0.38
Hoxc11-201ENSMUST00000001701 Elof1P60003 83 aa12.67□□□□□ -0.38
Hoxc11-201ENSMUST00000001701 Ifitm6A0A1B0GS75 124 aa12.65□□□□□ -0.38
Hoxc11-201ENSMUST00000001701 Fam19a5Q91WE9 132 aa12.65□□□□□ -0.38
Hoxc11-201ENSMUST00000001701 Dmac1Q9CQ00 111 aa12.65□□□□□ -0.38
Hoxc11-201ENSMUST00000001701 Trav3-1Q5R1I8 114 aa12.64□□□□□ -0.39
Hoxc11-201ENSMUST00000001701 SycnQ8VCK7 134 aa12.64□□□□□ -0.39
Hoxc11-201ENSMUST00000001701 Plac8Q9JI48 112 aa12.64□□□□□ -0.39
Hoxc11-201ENSMUST00000001701 Gm7276Q3TYW4 209 aa12.64□□□□□ -0.39
Hoxc11-201ENSMUST00000001701 Defa23Q5G866 93 aa12.63□□□□□ -0.39
Hoxc11-201ENSMUST00000001701 Fam19a1Q7TPG8 133 aa12.63□□□□□ -0.39
Hoxc11-201ENSMUST00000001701 Ly6g6cQ9Z1Q4 126 aa12.63□□□□□ -0.39
Hoxc11-201ENSMUST00000001701 BatfO35284 125 aa12.62□□□□□ -0.39
Hoxc11-201ENSMUST00000001701 Gm7102J3QQ10 178 aa12.61□□□□□ -0.39
Hoxc11-201ENSMUST00000001701 Ntn5Q3UQ22 452 aa12.61□□□□□ -0.39
Hoxc11-201ENSMUST00000001701 Znf414Q9DCK4 299 aa12.59□□□□□ -0.39
Hoxc11-201ENSMUST00000001701 Defb37Q7TMD2 62 aa12.59□□□□□ -0.39
Hoxc11-201ENSMUST00000001701 Defa27F2Z403 93 aa12.58□□□□□ -0.4
Hoxc11-201ENSMUST00000001701 Zcchc13Q9D548 170 aa12.57□□□□□ -0.4
Hoxc11-201ENSMUST00000001701 Dnah7aE9Q0T8 4024 aa12.57□□□□□ -0.4
Hoxc11-201ENSMUST00000001701 Xcl1P47993 114 aa12.57□□□□□ -0.4
Hoxc11-201ENSMUST00000001701 Trav14d-3-dv8A0A075B619 120 aa12.55□□□□□ -0.4
Hoxc11-201ENSMUST00000001701 Gm11939A2A592 99 aa12.54□□□□□ -0.4
Hoxc11-201ENSMUST00000001701 Igkv8-26A0A075B5N5 123 aa12.54□□□□□ -0.4
Hoxc11-201ENSMUST00000001701 Ighv10-3A0A075B5T6 119 aa12.54□□□□□ -0.4
Hoxc11-201ENSMUST00000001701 PscaP57096 123 aa12.54□□□□□ -0.4
Hoxc11-201ENSMUST00000001701 1700012A03RikQ9DAF1 130 aa12.53□□□□□ -0.4
Hoxc11-201ENSMUST00000001701 9530003J23RikQ8BM26 151 aa12.52□□□□□ -0.4
Hoxc11-201ENSMUST00000001701 Igkv1-122A0A140T8M9 119 aa12.52□□□□□ -0.41
Hoxc11-201ENSMUST00000001701 U90926O08546 118 aa12.52□□□□□ -0.41
Hoxc11-201ENSMUST00000001701 Gm11011D3Z3L9 86 aa12.51□□□□□ -0.41
Hoxc11-201ENSMUST00000001701 Igkv8-27A0A0G2JF28 120 aa12.49□□□□□ -0.41
Hoxc11-201ENSMUST00000001701 Igkv8-30A0A140T8M3 121 aa12.49□□□□□ -0.41
Hoxc11-201ENSMUST00000001701 Fam104aA2A6P4 185 aa12.49□□□□□ -0.41
Hoxc11-201ENSMUST00000001701 Lamtor3O88653 124 aa12.48□□□□□ -0.41
Hoxc11-201ENSMUST00000001701 Lyrm7Q9DA03 104 aa12.47□□□□□ -0.41
Hoxc11-201ENSMUST00000001701 Pcp4P63054 62 aa12.46□□□□□ -0.41
Hoxc11-201ENSMUST00000001701 Ighv2-2A0A075B5P8 116 aa12.45□□□□□ -0.42
Hoxc11-201ENSMUST00000001701 Ighv2-5A0A0A6YY69 116 aa12.45□□□□□ -0.42
Hoxc11-201ENSMUST00000001701 P01821 116 aa12.45□□□□□ -0.42
Hoxc11-201ENSMUST00000001701 Phf5aP83870 110 aaKnown RBP12.45□□□□□ -0.42
Hoxc11-201ENSMUST00000001701 Tmem243B2RVB9 118 aa12.45□□□□□ -0.42
Hoxc11-201ENSMUST00000001701 Gm10065F6TJM2 114 aa12.45□□□□□ -0.42
Hoxc11-201ENSMUST00000001701 Dnah7cA0A087WR13 4024 aa12.44□□□□□ -0.42
Hoxc11-201ENSMUST00000001701 A930002H24RikQ8C8Y3 163 aa12.44□□□□□ -0.42
Hoxc11-201ENSMUST00000001701 Krtap10-4Q08EG8 221 aa12.43□□□□□ -0.42
Hoxc11-201ENSMUST00000001701 A0A286YE02 88 aa12.42□□□□□ -0.42
Hoxc11-201ENSMUST00000001701 Defb9Q8R2I6 67 aa12.41□□□□□ -0.42
Hoxc11-201ENSMUST00000001701 Defa7P50705 93 aa12.4□□□□□ -0.42
Hoxc11-201ENSMUST00000001701 A730071L15RikQ8C4X0 137 aa12.4□□□□□ -0.42
Hoxc11-201ENSMUST00000001701 Krtap29-1A2A5X4 342 aa12.39□□□□□ -0.43
Hoxc11-201ENSMUST00000001701 PkigO70139 76 aa12.39□□□□□ -0.43
Hoxc11-201ENSMUST00000001701 Vpreb2P13373 142 aa12.39□□□□□ -0.43
Hoxc11-201ENSMUST00000001701 Ube2bP63147 152 aa12.37□□□□□ -0.43
Hoxc11-201ENSMUST00000001701 Dnah5Q8VHE6 4621 aa12.36□□□□□ -0.43
Hoxc11-201ENSMUST00000001701 Gm17521F6QAC8 156 aa12.35□□□□□ -0.43
Hoxc11-201ENSMUST00000001701 OxtP35454 125 aa12.35□□□□□ -0.43
Hoxc11-201ENSMUST00000001701 A830005F24RikQ8BRT5 167 aa12.33□□□□□ -0.43
Hoxc11-201ENSMUST00000001701 Rbm3O89086 153 aaKnown RBP12.33□□□□□ -0.44
Hoxc11-201ENSMUST00000001701 Vpreb1P13372 142 aa12.33□□□□□ -0.44
Hoxc11-201ENSMUST00000001701 Wfdc10Q3V2J9 124 aa12.33□□□□□ -0.44
Hoxc11-201ENSMUST00000001701 Vpreb3D3Z6J4 130 aa12.32□□□□□ -0.44
Hoxc11-201ENSMUST00000001701 Vps13dB1ART2 4390 aa12.32□□□□□ -0.44
Hoxc11-201ENSMUST00000001701 Igkv8-28A0A0G2JE47 121 aa12.32□□□□□ -0.44
Hoxc11-201ENSMUST00000001701 Ormdl1Q921I0 153 aa12.32□□□□□ -0.44
Hoxc11-201ENSMUST00000001701 6030445D17RikE9Q8F9 148 aa12.31□□□□□ -0.44
Hoxc11-201ENSMUST00000001701 4930535I16RikQ9CUI2 172 aa12.31□□□□□ -0.44
Hoxc11-201ENSMUST00000001701 Gm10308Q9CVR5 141 aa12.29□□□□□ -0.44
Hoxc11-201ENSMUST00000001701 Gm10570F6VB42 170 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 87.7 ms