RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 Igkv6-13A0A0G2JGY3 119 aa10□□□□□ -0.81
Rnf4-207ENSMUST00000182709 7530416G11RikJ3QJX6 159 aa10□□□□□ -0.81
Rnf4-207ENSMUST00000182709 MalO09198 153 aa10□□□□□ -0.81
Rnf4-207ENSMUST00000182709 Defa7P50705 93 aa10□□□□□ -0.81
Rnf4-207ENSMUST00000182709 4930518I15RikQ3V2W7 57 aa10□□□□□ -0.81
Rnf4-207ENSMUST00000182709 1700011M02RikB1AX35 88 aa9.99□□□□□ -0.81
Rnf4-207ENSMUST00000182709 P01755 137 aa9.99□□□□□ -0.81
Rnf4-207ENSMUST00000182709 Ighv8-11A0A075B5X4 119 aa9.98□□□□□ -0.81
Rnf4-207ENSMUST00000182709 Defb29Q8BGW9 78 aa9.98□□□□□ -0.81
Rnf4-207ENSMUST00000182709 Odf3l2Q3TZ65 277 aa9.97□□□□□ -0.81
Rnf4-207ENSMUST00000182709 Dnal4Q9DCM4 105 aa9.97□□□□□ -0.81
Rnf4-207ENSMUST00000182709 Ighv13-2A0A0A6YWN3 119 aa9.97□□□□□ -0.81
Rnf4-207ENSMUST00000182709 Igkv3-9A0A140T8P4 119 aa9.97□□□□□ -0.81
Rnf4-207ENSMUST00000182709 Cops9Q3U898 57 aa9.97□□□□□ -0.81
Rnf4-207ENSMUST00000182709 Defa21Q8C1P2 93 aa9.97□□□□□ -0.81
Rnf4-207ENSMUST00000182709 Igkv8-34A0A0G2JDU0 121 aa9.96□□□□□ -0.81
Rnf4-207ENSMUST00000182709 Gm9508A0A1W2P7W0 230 aa9.96□□□□□ -0.81
Rnf4-207ENSMUST00000182709 4930524J08RikQ9CUJ5 163 aa9.96□□□□□ -0.81
Rnf4-207ENSMUST00000182709 9430069I07RikQ9CX21 111 aa9.96□□□□□ -0.81
Rnf4-207ENSMUST00000182709 2010109I03RikQ9CQ11 111 aa9.96□□□□□ -0.82
Rnf4-207ENSMUST00000182709 FasnP19096 2504 aaKnown RBP9.95□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Stab2Q8R4U0 2559 aa9.95□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Igkv3-1A0A075B5P1 119 aa9.95□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Trav9n-4A0A075B631 113 aa9.95□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Zfp951A0A087WRH0 451 aa9.94□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Hbb-b2P02089 147 aa9.94□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Dnah14A0A140LIJ4 4489 aa9.94□□□□□ -0.82
Rnf4-207ENSMUST00000182709 4930519P11RikQ9CUJ8 166 aa9.94□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Naa38Q9D2U5 125 aa9.94□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Gm10647E9Q8X0 124 aa9.93□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Gm10577Q3UDV9 132 aa9.93□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Gm43218A0A0G2JGT0 114 aa9.93□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Reg3bP35230 175 aa9.93□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Rpl18aP62717 176 aaKnown RBP9.93□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Hist1h4aP62806 103 aaKnown RBP9.93□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Ndufa12Q7TMF3 145 aaKnown RBP9.93□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Lage3Q9CR70 148 aa9.93□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Defa20Q45VN2 95 aa9.93□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Trav13-1A0A075B644 110 aa9.92□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Cystm1Q8K353 104 aa9.92□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Igkv1-117A0A140T8M0 119 aa9.91□□□□□ -0.82
Rnf4-207ENSMUST00000182709 6430550D23RikE9Q1X6 194 aa9.91□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Rpl28P41105 137 aaKnown RBP9.91□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Krtap11-1E9Q2E9 183 aa9.9□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Gm10549Q3URY4 149 aa9.9□□□□□ -0.82
Rnf4-207ENSMUST00000182709 FcgbpE9Q0B5 2583 aa9.9□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Dnah6E9Q0B6 4144 aa9.9□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Trav13-2A0A075B649 110 aa9.9□□□□□ -0.82
Rnf4-207ENSMUST00000182709 Kmt2aP55200 3966 aa9.9□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Tmem243B2RVB9 118 aa9.9□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Spata3Q9D9T6 193 aa9.9□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Gm7102J3QQ10 178 aa9.89□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Acyp1P56376 99 aa9.89□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Zfand2aQ9JII7 171 aa9.89□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Snhg11Q4G0K9 87 aa9.88□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Megf8P60882 2789 aa9.88□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Gm16381A0A1Y7VKT9 73 aa9.88□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Tmem86bQ497J1 226 aa9.88□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Wfdc12Q9JHY3 85 aa9.88□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Serp2Q6TAW2 65 aa9.88□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Muc6Q80T03 2850 aa9.88□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Samd13D3YUG0 102 aa9.87□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Ighv8-13A0A075B5Y0 101 aa9.87□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Igkv8-24A0A140T8P5 121 aa9.86□□□□□ -0.83
Rnf4-207ENSMUST00000182709 A0A286YCN5 57 aa9.86□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Smim26Q3V460 107 aa9.86□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Rps28P62858 69 aaKnown RBP9.86□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Defb50Q6TU36 73 aa9.86□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Trav13n-2A0A0G2JF93 110 aa9.85□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Dnah7bL7N1Y0 4068 aa9.85□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Tenm2Q9WTS5 2764 aa9.85□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Klk9Q32M27 251 aa9.85□□□□□ -0.83
Rnf4-207ENSMUST00000182709 EnhoQ8K1D8 76 aa9.85□□□□□ -0.83
Rnf4-207ENSMUST00000182709 MifP34884 115 aaKnown RBP9.85□□□□□ -0.83
Rnf4-207ENSMUST00000182709 4930535I16RikQ9CUI2 172 aa9.85□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Tmem258P61166 79 aa9.84□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Tmem223Q9CQE2 199 aaKnown RBP9.84□□□□□ -0.83
Rnf4-207ENSMUST00000182709 Defa23Q5G866 93 aa9.82□□□□□ -0.84
Rnf4-207ENSMUST00000182709 Csmd3Q80T79 3707 aa9.82□□□□□ -0.84
Rnf4-207ENSMUST00000182709 Ntn5Q3UQ22 452 aa9.82□□□□□ -0.84
Rnf4-207ENSMUST00000182709 AplnQ9R0R4 77 aa9.82□□□□□ -0.84
Rnf4-207ENSMUST00000182709 1810062G17RikG3X8Y2 129 aa9.82□□□□□ -0.84
Rnf4-207ENSMUST00000182709 Igkv8-16A0A0G2JDG9 121 aa9.81□□□□□ -0.84
Rnf4-207ENSMUST00000182709 Mrpl52Q9D0Y8 121 aa9.81□□□□□ -0.84
Rnf4-207ENSMUST00000182709 Tmem254aP0DN89 123 aa9.8□□□□□ -0.84
Rnf4-207ENSMUST00000182709 Tmem254bP0DN90 123 aa9.8□□□□□ -0.84
Rnf4-207ENSMUST00000182709 Tmem254cP0DN91 123 aa9.8□□□□□ -0.84
Rnf4-207ENSMUST00000182709 Ifitm6A0A1B0GS75 124 aa9.8□□□□□ -0.84
Rnf4-207ENSMUST00000182709 Gm19935A0A1B0GSF9 52 aa9.8□□□□□ -0.84
Rnf4-207ENSMUST00000182709 Ighv2-9-1A0A075B697 116 aa9.79□□□□□ -0.84
Rnf4-207ENSMUST00000182709 Fam19a5Q91WE9 132 aa9.79□□□□□ -0.84
Rnf4-207ENSMUST00000182709 Ighv1-56A0A0A6YXG2 117 aa9.78□□□□□ -0.84
Rnf4-207ENSMUST00000182709 C530025M09RikF6RGA8 229 aa9.77□□□□□ -0.85
Rnf4-207ENSMUST00000182709 GhrhP16043 103 aa9.77□□□□□ -0.85
Rnf4-207ENSMUST00000182709 Gm10518F6UQQ9 182 aa9.77□□□□□ -0.85
Rnf4-207ENSMUST00000182709 E130208F15RikQ3UPV3 143 aa9.77□□□□□ -0.85
Rnf4-207ENSMUST00000182709 Fam19a1Q7TPG8 133 aa9.77□□□□□ -0.85
Rnf4-207ENSMUST00000182709 Gm16181B0V2H2 73 aa9.76□□□□□ -0.85
Rnf4-207ENSMUST00000182709 Ube2d4D3YUH6 135 aa9.76□□□□□ -0.85
Rnf4-207ENSMUST00000182709 Brk1Q91VR8 75 aa9.76□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 68.7 ms