RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Gm10065F6TJM2 114 aa11.86□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Lect2O88803 151 aa11.86□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Hbb-b2P02089 147 aa11.86□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Fam104aA2A6P4 185 aa11.85□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Ufsp1Q9CZP0 217 aa11.85□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Cited1P97769 203 aa11.84□□□□□ -0.51
Vti1b-201ENSMUST00000055262 ScxQ64124 207 aa11.84□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Gm10295Q8CCF3 114 aa11.84□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Gm35549A0A0N4SUS7 141 aa11.83□□□□□ -0.52
Vti1b-201ENSMUST00000055262 4930544G11RikQ9CR99 193 aa11.83□□□□□ -0.52
Vti1b-201ENSMUST00000055262 1600014C23RikQ9DAX4 101 aa11.83□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Gnb1lQ9EQ15 326 aa11.83□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Pkhd1E9PZ36 4059 aa11.83□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Gm28269A0A087WSG3 125 aa11.83□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Igkv8-16A0A0G2JDG9 121 aa11.83□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Gm44965A0A0N4SVR3 59 aa11.82□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Gm45753A0A1C7CYU8 86 aa11.82□□□□□ -0.52
Vti1b-201ENSMUST00000055262 A0A286YCN5 57 aa11.82□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Scgb1b19F6WYW0 93 aa11.82□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Pou2af1Q64693 256 aa11.82□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Ssbp1Q9CYR0 152 aaKnown RBP11.82□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Dpm2Q9Z324 84 aa11.82□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Gm29289A0A087WPY7 166 aa11.8□□□□□ -0.52
Vti1b-201ENSMUST00000055262 1700010B08RikQ9DAI7 102 aa11.8□□□□□ -0.52
Vti1b-201ENSMUST00000055262 A0A1Y7VJH8 109 aa11.78□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Gm26727M0QWT1 121 aa11.78□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Wfdc12Q9JHY3 85 aa11.78□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Krtap29-1A2A5X4 342 aa11.77□□□□□ -0.52
Vti1b-201ENSMUST00000055262 1700011M02RikB1AX35 88 aa11.77□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Triap1Q9D8Z2 76 aa11.77□□□□□ -0.52
Vti1b-201ENSMUST00000055262 Scgb1b15A0A087WP50 93 aa11.76□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Trav13-2A0A075B649 110 aa11.76□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Smim1P0C8K7 78 aa11.76□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Gm10518F6UQQ9 182 aa11.75□□□□□ -0.53
Vti1b-201ENSMUST00000055262 MifP34884 115 aaKnown RBP11.75□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Znf414Q9DCK4 299 aa11.75□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Defa23Q5G866 93 aa11.74□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Zcchc13Q9D548 170 aa11.74□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Pfn2Q9JJV2 140 aa11.74□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Timm17bQ9Z0V7 172 aa11.74□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Trav4d-3A0A075B625 110 aa11.72□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Wfdc6bF6ULY1 148 aa11.72□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Ntn5Q3UQ22 452 aa11.72□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Uqcc3Q8K2T4 89 aa11.72□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Reg3dQ9QUS9 175 aa11.72□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Gpr15lA0A0B4J1N3 78 aa11.71□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Inafm2A0A1L1STD6 152 aa11.71□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Ube2d4D3YUH6 135 aa11.71□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Tex54G3UW99 86 aa11.71□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Gm10577Q3UDV9 132 aa11.71□□□□□ -0.53
Vti1b-201ENSMUST00000055262 Vamp8O70404 101 aa11.7□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Cops9Q3U898 57 aa11.7□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Defb45Q3V490 66 aa11.7□□□□□ -0.54
Vti1b-201ENSMUST00000055262 C920008G01RikA0A0B4J1N1 112 aa11.69□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Defa27F2Z403 93 aa11.69□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Tcl1b3P56842 122 aa11.69□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Sostdc1Q9CQN4 206 aa11.69□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Obox2E9PXV9 151 aa11.68□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Prol1E9PYQ4 312 aa11.67□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Tal2Q62282 108 aa11.67□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Fam168bQ80XQ8 194 aa11.67□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Rpl24Q8BP67 157 aaKnown RBP11.67□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Plscr4P58196 326 aa11.66□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Fam19a1Q7TPG8 133 aa11.66□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Pglyrp4Q0VB07 374 aa11.65□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Dnah8Q91XQ0 4731 aa11.65□□□□□ -0.54
Vti1b-201ENSMUST00000055262 Glrp1E9Q9S8 174 aa11.64□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Try10Q792Z1 246 aaKnown RBP11.64□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Kmt2cQ8BRH4 4903 aa11.64□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Ighv2-2A0A075B5P8 116 aa11.63□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Ighv2-5A0A0A6YY69 116 aa11.63□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Gm11020F6ZGD5 61 aa11.63□□□□□ -0.55
Vti1b-201ENSMUST00000055262 P01821 116 aa11.63□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Fam19a5Q91WE9 132 aa11.63□□□□□ -0.55
Vti1b-201ENSMUST00000055262 ApobE9Q414 4505 aa11.62□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Cox7bP56393 80 aa11.62□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Cdk2ap2Q9CPY4 127 aa11.62□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Defb9Q8R2I6 67 aa11.61□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Lage3Q9CR70 148 aa11.6□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Birc6O88738 4882 aa11.6□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Ccl17F6R5P4 103 aa11.59□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Rpl28P41105 137 aaKnown RBP11.59□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Slamf6Q9ET39 351 aa11.59□□□□□ -0.55
Vti1b-201ENSMUST00000055262 Herc2Q4U2R1 4836 aa11.58□□□□□ -0.56
Vti1b-201ENSMUST00000055262 Igkv8-18A0A0B4J1J3 123 aa11.58□□□□□ -0.56
Vti1b-201ENSMUST00000055262 Igkv1-88A0A140T8N1 120 aa11.57□□□□□ -0.56
Vti1b-201ENSMUST00000055262 Lst1O08843 95 aa11.57□□□□□ -0.56
Vti1b-201ENSMUST00000055262 Defa20Q45VN2 95 aa11.57□□□□□ -0.56
Vti1b-201ENSMUST00000055262 4930415O20RikQ8CDT5 131 aa11.57□□□□□ -0.56
Vti1b-201ENSMUST00000055262 Csdc2Q91YQ3 154 aa11.57□□□□□ -0.56
Vti1b-201ENSMUST00000055262 Wdr38Q9D994 303 aa11.57□□□□□ -0.56
Vti1b-201ENSMUST00000055262 Gm6793B2RXM2 351 aa11.57□□□□□ -0.56
Vti1b-201ENSMUST00000055262 Defa3P28310 93 aa11.57□□□□□ -0.56
Vti1b-201ENSMUST00000055262 Gm10845Q3UNY9 185 aa11.57□□□□□ -0.56
Vti1b-201ENSMUST00000055262 S100a8P27005 89 aa11.56□□□□□ -0.56
Vti1b-201ENSMUST00000055262 Rpl18aP62717 176 aaKnown RBP11.56□□□□□ -0.56
Vti1b-201ENSMUST00000055262 Phf5aP83870 110 aaKnown RBP11.56□□□□□ -0.56
Vti1b-201ENSMUST00000055262 P84750 121 aa11.56□□□□□ -0.56
Vti1b-201ENSMUST00000055262 MalO09198 153 aa11.55□□□□□ -0.56
Vti1b-201ENSMUST00000055262 Gemin7Q9CWY4 129 aa11.55□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms