RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 AcacbE9Q4Z2 2448 aa10.57□□□□□ -0.72
Shroom3-202ENSMUST00000113054 Wdr38Q9D994 303 aa10.56□□□□□ -0.72
Shroom3-202ENSMUST00000113054 Pkd1l2Q7TN88 2461 aa10.55□□□□□ -0.72
Shroom3-202ENSMUST00000113054 1700011M02RikB1AX35 88 aa10.54□□□□□ -0.72
Shroom3-202ENSMUST00000113054 Q8K1L6 76 aa10.54□□□□□ -0.72
Shroom3-202ENSMUST00000113054 Chchd7Q8K2Q5 85 aa10.54□□□□□ -0.72
Shroom3-202ENSMUST00000113054 Gm9922Q8C3P1 144 aa10.54□□□□□ -0.72
Shroom3-202ENSMUST00000113054 NpwA0A1L1STR8 176 aa10.53□□□□□ -0.72
Shroom3-202ENSMUST00000113054 Atp5eP56382 52 aa10.53□□□□□ -0.72
Shroom3-202ENSMUST00000113054 Atox1O08997 68 aaKnown RBP10.53□□□□□ -0.72
Shroom3-202ENSMUST00000113054 Col4a4Q9QZR9 1682 aa10.53□□□□□ -0.72
Shroom3-202ENSMUST00000113054 CdsnQ7TPC1 561 aa10.52□□□□□ -0.73
Shroom3-202ENSMUST00000113054 A930009A15RikG3UYI6 118 aa10.52□□□□□ -0.73
Shroom3-202ENSMUST00000113054 Cd164l2Q9D6W7 172 aa10.51□□□□□ -0.73
Shroom3-202ENSMUST00000113054 A0A286YE49 62 aa10.51□□□□□ -0.73
Shroom3-202ENSMUST00000113054 Ndufc1Q9CQY9 76 aa10.5□□□□□ -0.73
Shroom3-202ENSMUST00000113054 C130032M10RikQ8C888 123 aa10.5□□□□□ -0.73
Shroom3-202ENSMUST00000113054 Cdc42se2Q8BGH7 84 aa10.5□□□□□ -0.73
Shroom3-202ENSMUST00000113054 Gm16485Q8C4B7 115 aa10.5□□□□□ -0.73
Shroom3-202ENSMUST00000113054 Serp1Q9Z1W5 66 aa10.49□□□□□ -0.73
Shroom3-202ENSMUST00000113054 1700056E22RikF7CNM6 234 aa10.49□□□□□ -0.73
Shroom3-202ENSMUST00000113054 B230217C12RikE9Q3Z1 139 aa10.48□□□□□ -0.73
Shroom3-202ENSMUST00000113054 Gm10300Q8C8P7 189 aa10.48□□□□□ -0.73
Shroom3-202ENSMUST00000113054 Gm3443F7CCV5 94 aa10.48□□□□□ -0.73
Shroom3-202ENSMUST00000113054 Gm10509O88255 85 aa10.47□□□□□ -0.73
Shroom3-202ENSMUST00000113054 Myo9aQ8C170 2542 aa10.46□□□□□ -0.73
Shroom3-202ENSMUST00000113054 Arhgap32Q811P8 2089 aa10.46□□□□□ -0.73
Shroom3-202ENSMUST00000113054 Zfyve26Q5DU37 2529 aa10.46□□□□□ -0.73
Shroom3-202ENSMUST00000113054 Ifitm6A0A1B0GS75 124 aa10.46□□□□□ -0.74
Shroom3-202ENSMUST00000113054 Timm17bQ9Z0V7 172 aa10.46□□□□□ -0.74
Shroom3-202ENSMUST00000113054 Ighv2-9A0A075B5Q5 116 aa10.44□□□□□ -0.74
Shroom3-202ENSMUST00000113054 Rif1Q6PR54 2419 aaKnown RBP10.44□□□□□ -0.74
Shroom3-202ENSMUST00000113054 BC067074F6RXI4 2391 aa10.44□□□□□ -0.74
Shroom3-202ENSMUST00000113054 Polr2kQ63871 58 aa10.44□□□□□ -0.74
Shroom3-202ENSMUST00000113054 Trav14-1A0A0G2JF94 121 aa10.44□□□□□ -0.74
Shroom3-202ENSMUST00000113054 Gm26566Q8CAC1 153 aa10.44□□□□□ -0.74
Shroom3-202ENSMUST00000113054 Igkv8-19A0A0G2JFN8 121 aa10.43□□□□□ -0.74
Shroom3-202ENSMUST00000113054 Abca2P41234 2434 aa10.43□□□□□ -0.74
Shroom3-202ENSMUST00000113054 Gm20604F8WIA3 75 aa10.43□□□□□ -0.74
Shroom3-202ENSMUST00000113054 Adamts20P59511 1906 aa10.41□□□□□ -0.74
Shroom3-202ENSMUST00000113054 Vpreb1P13372 142 aa10.41□□□□□ -0.74
Shroom3-202ENSMUST00000113054 BtcQ05928 177 aa10.41□□□□□ -0.74
Shroom3-202ENSMUST00000113054 Gm3250E9Q1M3 230 aa10.4□□□□□ -0.74
Shroom3-202ENSMUST00000113054 Kiaa1549Q68FD9 1940 aa10.4□□□□□ -0.74
Shroom3-202ENSMUST00000113054 Ighv1-56A0A0A6YXG2 117 aa10.39□□□□□ -0.75
Shroom3-202ENSMUST00000113054 2310009B15RikA0A0A6YWI4 143 aa10.39□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Smim1P0C8K7 78 aa10.39□□□□□ -0.75
Shroom3-202ENSMUST00000113054 SrarpQ3ULG3 163 aa10.38□□□□□ -0.75
Shroom3-202ENSMUST00000113054 CtrlQ9ER05 264 aa10.38□□□□□ -0.75
Shroom3-202ENSMUST00000113054 H2al1kJ3QP08 105 aa10.38□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Ighv8-13A0A075B5Y0 101 aa10.38□□□□□ -0.75
Shroom3-202ENSMUST00000113054 4930556J24RikQ9D4U7 146 aa10.37□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Cd27P41272 250 aa10.37□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Gm5142Q8C5X9 133 aa10.36□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Nav2E9Q842 2432 aa10.36□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Gm10322F7D7I4 111 aa10.36□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Srsf12Q8C8K3 266 aa10.36□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Gm6899Q3USS0 134 aa10.35□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Hivep2Q3UHF7 2430 aa10.35□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Tns1E9Q0S6 1888 aaKnown RBP10.35□□□□□ -0.75
Shroom3-202ENSMUST00000113054 SrcapA0A087WQ44 3271 aa10.35□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Gm17509Q9CZ61 145 aa10.35□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Ighv2-9-1A0A075B697 116 aa10.34□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Serp2Q6TAW2 65 aa10.34□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Gm10577Q3UDV9 132 aa10.34□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Gm5464Q3UY29 175 aa10.33□□□□□ -0.75
Shroom3-202ENSMUST00000113054 Prr9Q8BV84 116 aa10.32□□□□□ -0.76
Shroom3-202ENSMUST00000113054 Pla2g2eQ9QUL3 142 aa10.31□□□□□ -0.76
Shroom3-202ENSMUST00000113054 Gm28539A0A087WSL9 92 aa10.31□□□□□ -0.76
Shroom3-202ENSMUST00000113054 Tmem213Q08EA8 116 aa10.3□□□□□ -0.76
Shroom3-202ENSMUST00000113054 Ypel4Q65Z93 127 aa10.3□□□□□ -0.76
Shroom3-202ENSMUST00000113054 Gm10642Q3TWM1 71 aa10.3□□□□□ -0.76
Shroom3-202ENSMUST00000113054 RetnlbQ99P86 105 aa10.29□□□□□ -0.76
Shroom3-202ENSMUST00000113054 4930432M17RikQ3V0W9 174 aa10.29□□□□□ -0.76
Shroom3-202ENSMUST00000113054 Notch2O35516 2470 aa10.29□□□□□ -0.76
Shroom3-202ENSMUST00000113054 Sprr2jO70561 109 aa10.29□□□□□ -0.76
Shroom3-202ENSMUST00000113054 CenpwQ3URR0 86 aa10.28□□□□□ -0.76
Shroom3-202ENSMUST00000113054 Defb11Q8R2I7 77 aa10.28□□□□□ -0.76
Shroom3-202ENSMUST00000113054 Gm5153P01627 120 aa10.27□□□□□ -0.76
Shroom3-202ENSMUST00000113054 4930524J08RikQ9CUJ5 163 aa10.27□□□□□ -0.77
Shroom3-202ENSMUST00000113054 Gm28230A0A0A0MQ91 144 aa10.27□□□□□ -0.77
Shroom3-202ENSMUST00000113054 4930519P11RikQ9CUJ8 166 aa10.27□□□□□ -0.77
Shroom3-202ENSMUST00000113054 Q9DAA7 145 aa10.26□□□□□ -0.77
Shroom3-202ENSMUST00000113054 Defb37Q7TMD2 62 aa10.26□□□□□ -0.77
Shroom3-202ENSMUST00000113054 A730009L09RikA0A1B0GS82 72 aa10.25□□□□□ -0.77
Shroom3-202ENSMUST00000113054 Sox16Q62247 57 aa10.24□□□□□ -0.77
Shroom3-202ENSMUST00000113054 Pou2af1Q64693 256 aa10.24□□□□□ -0.77
Shroom3-202ENSMUST00000113054 Zfand2aQ9JII7 171 aa10.24□□□□□ -0.77
Shroom3-202ENSMUST00000113054 Flg2Q2VIS4 2362 aa10.24□□□□□ -0.77
Shroom3-202ENSMUST00000113054 Krtap27-1E9PX37 202 aa10.24□□□□□ -0.77
Shroom3-202ENSMUST00000113054 Ntn5Q3UQ22 452 aa10.24□□□□□ -0.77
Shroom3-202ENSMUST00000113054 Gm10570F6VB42 170 aa10.23□□□□□ -0.77
Shroom3-202ENSMUST00000113054 Cd164Q9R0L9 197 aa10.23□□□□□ -0.77
Shroom3-202ENSMUST00000113054 Odf3l2Q3TZ65 277 aa10.22□□□□□ -0.77
Shroom3-202ENSMUST00000113054 Lrrk2Q5S006 2527 aa10.22□□□□□ -0.77
Shroom3-202ENSMUST00000113054 Reg3aO09037 175 aa10.21□□□□□ -0.77
Shroom3-202ENSMUST00000113054 A830031A19RikQ8BNT5 113 aa10.21□□□□□ -0.77
Shroom3-202ENSMUST00000113054 CnfnQ6PCW6 111 aa10.21□□□□□ -0.78
Shroom3-202ENSMUST00000113054 PtprbB2RU80 1998 aa10.21□□□□□ -0.78
Shroom3-202ENSMUST00000113054 Nav3Q80TN7 2359 aa10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 97.7 ms