RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Gm17472A0A075B683 117 aa5.51□□□□□ -1.53
Usp40-201ENSMUST00000040783 B230359F08RikA0A0B4J1K3 109 aa5.51□□□□□ -1.53
Usp40-201ENSMUST00000040783 Wfdc15aQ8BH89 80 aa5.51□□□□□ -1.53
Usp40-201ENSMUST00000040783 Defb42Q8BVB5 75 aa5.51□□□□□ -1.53
Usp40-201ENSMUST00000040783 Pde6gP09174 87 aa5.5□□□□□ -1.53
Usp40-201ENSMUST00000040783 4930518I15RikQ3V2W7 57 aa5.5□□□□□ -1.53
Usp40-201ENSMUST00000040783 Ccdc179J3QM76 67 aa5.5□□□□□ -1.53
Usp40-201ENSMUST00000040783 P06320 134 aa5.5□□□□□ -1.53
Usp40-201ENSMUST00000040783 Klk9Q32M27 251 aa5.5□□□□□ -1.53
Usp40-201ENSMUST00000040783 A530084C06RikQ3UTW2 186 aa5.5□□□□□ -1.53
Usp40-201ENSMUST00000040783 Gm5464Q3UY29 175 aa5.5□□□□□ -1.53
Usp40-201ENSMUST00000040783 Nupr2Q497P3 102 aa5.5□□□□□ -1.53
Usp40-201ENSMUST00000040783 Fam19a1Q7TPG8 133 aa5.5□□□□□ -1.53
Usp40-201ENSMUST00000040783 Bean1Q9EQG5 255 aa5.5□□□□□ -1.53
Usp40-201ENSMUST00000040783 DysfQ9ESD7 2090 aa5.5□□□□□ -1.53
Usp40-201ENSMUST00000040783 Gm12353A2AGJ4 60 aa5.49□□□□□ -1.53
Usp40-201ENSMUST00000040783 Prr15lQ8JZM2 100 aa5.49□□□□□ -1.53
Usp40-201ENSMUST00000040783 Ighv8-11A0A075B5X4 119 aa5.49□□□□□ -1.53
Usp40-201ENSMUST00000040783 A930009A15RikG3UYI6 118 aa5.49□□□□□ -1.53
Usp40-201ENSMUST00000040783 LhbO09108 141 aa5.49□□□□□ -1.53
Usp40-201ENSMUST00000040783 Ube2d3P61079 147 aa5.49□□□□□ -1.53
Usp40-201ENSMUST00000040783 Ube2d2P62838 147 aa5.49□□□□□ -1.53
Usp40-201ENSMUST00000040783 2310009B15RikA0A0A6YWI4 143 aa5.49□□□□□ -1.53
Usp40-201ENSMUST00000040783 Igkv1-35A0A0G2JDE5 120 aa5.49□□□□□ -1.53
Usp40-201ENSMUST00000040783 4930556J24RikQ9D4U7 146 aa5.49□□□□□ -1.53
Usp40-201ENSMUST00000040783 Prrc2aQ7TSC1 2158 aaKnown RBP5.48□□□□□ -1.53
Usp40-201ENSMUST00000040783 Gm5629P06327 117 aa5.48□□□□□ -1.53
Usp40-201ENSMUST00000040783 Spink13Q3UTS8 97 aa5.48□□□□□ -1.53
Usp40-201ENSMUST00000040783 4930564D02RikQ9D4S4 103 aa5.48□□□□□ -1.53
Usp40-201ENSMUST00000040783 Col27a1Q5QNQ9 1845 aa5.48□□□□□ -1.53
Usp40-201ENSMUST00000040783 Smr3aQ61900 147 aa5.48□□□□□ -1.53
Usp40-201ENSMUST00000040783 Usp9xP70398 2559 aaKnown RBP5.48□□□□□ -1.53
Usp40-201ENSMUST00000040783 Gm3443F7CCV5 94 aa5.48□□□□□ -1.53
Usp40-201ENSMUST00000040783 Bri3P28662 125 aa5.48□□□□□ -1.53
Usp40-201ENSMUST00000040783 Gm26566Q8CAC1 153 aa5.47□□□□□ -1.53
Usp40-201ENSMUST00000040783 Myo15aQ9QZZ4 3511 aa5.47□□□□□ -1.53
Usp40-201ENSMUST00000040783 Ighv1-66A0A075B5X5 117 aa5.47□□□□□ -1.53
Usp40-201ENSMUST00000040783 P01819 144 aa5.47□□□□□ -1.53
Usp40-201ENSMUST00000040783 Klk12B2RVZ0 247 aa5.47□□□□□ -1.53
Usp40-201ENSMUST00000040783 DmdP11531 3678 aa5.47□□□□□ -1.53
Usp40-201ENSMUST00000040783 FcorP0DJI6 106 aa5.47□□□□□ -1.53
Usp40-201ENSMUST00000040783 Prr9Q8BV84 116 aa5.47□□□□□ -1.53
Usp40-201ENSMUST00000040783 CenpfE9Q3P4 2997 aaKnown RBP5.46□□□□□ -1.53
Usp40-201ENSMUST00000040783 Gm10490F6VBM2 120 aa5.46□□□□□ -1.53
Usp40-201ENSMUST00000040783 TshbP12656 138 aa5.46□□□□□ -1.53
Usp40-201ENSMUST00000040783 Gm28374F6SG70 93 aa5.46□□□□□ -1.54
Usp40-201ENSMUST00000040783 FryE9Q8I9 3020 aa5.46□□□□□ -1.54
Usp40-201ENSMUST00000040783 Ly6g6cQ9Z1Q4 126 aa5.46□□□□□ -1.54
Usp40-201ENSMUST00000040783 AcanQ61282 2132 aaKnown RBP5.45□□□□□ -1.54
Usp40-201ENSMUST00000040783 Trav13n-2A0A0G2JF93 110 aa5.45□□□□□ -1.54
Usp40-201ENSMUST00000040783 Ighv2-6-8A0A0A6YWY9 116 aa5.45□□□□□ -1.54
Usp40-201ENSMUST00000040783 Tcl1b3P56842 122 aa5.45□□□□□ -1.54
Usp40-201ENSMUST00000040783 ScxQ64124 207 aa5.45□□□□□ -1.54
Usp40-201ENSMUST00000040783 Igkv2-109A0A075B5K6 120 aa5.45□□□□□ -1.54
Usp40-201ENSMUST00000040783 D730001G18RikA0A087WQU7 115 aa5.45□□□□□ -1.54
Usp40-201ENSMUST00000040783 Wfdc6bF6ULY1 148 aa5.45□□□□□ -1.54
Usp40-201ENSMUST00000040783 Q8K1L6 76 aa5.45□□□□□ -1.54
Usp40-201ENSMUST00000040783 Rnf185Q91YT2 192 aa5.45□□□□□ -1.54
Usp40-201ENSMUST00000040783 Cd164l2Q9D6W7 172 aa5.45□□□□□ -1.54
Usp40-201ENSMUST00000040783 Kiaa1549Q68FD9 1940 aa5.44□□□□□ -1.54
Usp40-201ENSMUST00000040783 Zfp462B1AWL2 2495 aaKnown RBP5.44□□□□□ -1.54
Usp40-201ENSMUST00000040783 Ube2d1P61080 147 aaKnown RBP5.44□□□□□ -1.54
Usp40-201ENSMUST00000040783 Col6a3E9PWQ3 3284 aa5.44□□□□□ -1.54
Usp40-201ENSMUST00000040783 Ighv2-5A0A0A6YY69 116 aa5.44□□□□□ -1.54
Usp40-201ENSMUST00000040783 Gm10401E9Q3K6 71 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 Col5a1O88207 1838 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 P18527 97 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 5730596B20RikQ8BQ08 205 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 B430305J03RikQ8BQQ8 176 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 Wfdc10Q3V2J9 124 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 SycnQ8VCK7 134 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 Fgf23Q9EPC2 251 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 Vpreb3D3Z6J4 130 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 Obox2E9PXV9 151 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 Gm10509O88255 85 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 Srsf12Q8C8K3 266 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 VcanQ62059 3357 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 Igkv3-4A0A140T8Q4 119 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 4930535I16RikQ9CUI2 172 aa5.43□□□□□ -1.54
Usp40-201ENSMUST00000040783 2010109I03RikQ9CQ11 111 aa5.42□□□□□ -1.54
Usp40-201ENSMUST00000040783 Gm10197F6QEY5 67 aa5.42□□□□□ -1.54
Usp40-201ENSMUST00000040783 Gm10570F6VB42 170 aa5.42□□□□□ -1.54
Usp40-201ENSMUST00000040783 Tfpi2O35536 230 aa5.42□□□□□ -1.54
Usp40-201ENSMUST00000040783 Plac8l1Q08EJ0 177 aa5.42□□□□□ -1.54
Usp40-201ENSMUST00000040783 Trbv13-2A0A140T8N6 113 aa5.41□□□□□ -1.54
Usp40-201ENSMUST00000040783 Gm17521F6QAC8 156 aa5.41□□□□□ -1.54
Usp40-201ENSMUST00000040783 Gm10643Q3URG9 111 aa5.41□□□□□ -1.54
Usp40-201ENSMUST00000040783 Znf580Q9DB38 172 aa5.41□□□□□ -1.54
Usp40-201ENSMUST00000040783 Gm11213A0A1B0GR83 88 aa5.41□□□□□ -1.54
Usp40-201ENSMUST00000040783 Polr2kQ63871 58 aa5.41□□□□□ -1.54
Usp40-201ENSMUST00000040783 Defb11Q8R2I7 77 aa5.41□□□□□ -1.54
Usp40-201ENSMUST00000040783 Rpl39lQ9CQD0 51 aa5.41□□□□□ -1.54
Usp40-201ENSMUST00000040783 Dchs1E9PVD3 3291 aa5.41□□□□□ -1.54
Usp40-201ENSMUST00000040783 P01823 113 aa5.4□□□□□ -1.54
Usp40-201ENSMUST00000040783 Igkv8-21A0A140T8P7 120 aa5.4□□□□□ -1.54
Usp40-201ENSMUST00000040783 Krtap16-1A2A5X5 502 aa5.4□□□□□ -1.54
Usp40-201ENSMUST00000040783 Igkv4-92A0A0B4J1I2 117 aa5.4□□□□□ -1.55
Usp40-201ENSMUST00000040783 Nav3Q80TN7 2359 aa5.39□□□□□ -1.55
Usp40-201ENSMUST00000040783 Ighv2-9-1A0A075B697 116 aa5.39□□□□□ -1.55
Usp40-201ENSMUST00000040783 Ube2d4D3YUH6 135 aa5.39□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 63.5 ms