RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Igkv1-99F6XWB2 120 aa10.45□□□□□ -0.74
Nup54-201ENSMUST00000038514 4930519P11RikQ9CUJ8 166 aa10.45□□□□□ -0.74
Nup54-201ENSMUST00000038514 Ighv1-56A0A0A6YXG2 117 aa10.44□□□□□ -0.74
Nup54-201ENSMUST00000038514 Scgb1b2O35176 93 aa10.44□□□□□ -0.74
Nup54-201ENSMUST00000038514 Defa16P50714 93 aa10.43□□□□□ -0.74
Nup54-201ENSMUST00000038514 Il19Q8CJ70 176 aa10.43□□□□□ -0.74
Nup54-201ENSMUST00000038514 Tomm7Q9D173 55 aa10.43□□□□□ -0.74
Nup54-201ENSMUST00000038514 Spink4O35679 86 aa10.42□□□□□ -0.74
Nup54-201ENSMUST00000038514 Igf1P05017 153 aa10.42□□□□□ -0.74
Nup54-201ENSMUST00000038514 Defa25Q5G864 92 aa10.42□□□□□ -0.74
Nup54-201ENSMUST00000038514 Prss58Q8BW11 241 aa10.42□□□□□ -0.74
Nup54-201ENSMUST00000038514 Bles03Q8VD62 251 aa10.42□□□□□ -0.74
Nup54-201ENSMUST00000038514 1810062G17RikG3X8Y2 129 aa10.41□□□□□ -0.74
Nup54-201ENSMUST00000038514 Cd99Q8VCN6 175 aa10.41□□□□□ -0.74
Nup54-201ENSMUST00000038514 Hivep2Q3UHF7 2430 aa10.41□□□□□ -0.74
Nup54-201ENSMUST00000038514 Zfp951A0A087WRH0 451 aa10.41□□□□□ -0.74
Nup54-201ENSMUST00000038514 Defb26Q30KN7 186 aa10.41□□□□□ -0.74
Nup54-201ENSMUST00000038514 Dnal4Q9DCM4 105 aa10.41□□□□□ -0.74
Nup54-201ENSMUST00000038514 Pla2g1bQ9Z0Y2 146 aa10.41□□□□□ -0.74
Nup54-201ENSMUST00000038514 Hist1h4aP62806 103 aaKnown RBP10.4□□□□□ -0.74
Nup54-201ENSMUST00000038514 Odf3l2Q3TZ65 277 aa10.4□□□□□ -0.74
Nup54-201ENSMUST00000038514 Trav13-1A0A075B644 110 aa10.39□□□□□ -0.75
Nup54-201ENSMUST00000038514 Igkv4-53A0A0G2JFC6 119 aa10.39□□□□□ -0.75
Nup54-201ENSMUST00000038514 Smim26Q3V460 107 aa10.39□□□□□ -0.75
Nup54-201ENSMUST00000038514 Sprr1bQ62267 153 aa10.39□□□□□ -0.75
Nup54-201ENSMUST00000038514 Helz2E9QAM5 2947 aaKnown RBP10.38□□□□□ -0.75
Nup54-201ENSMUST00000038514 Trav13n-2A0A0G2JF93 110 aa10.38□□□□□ -0.75
Nup54-201ENSMUST00000038514 Igkv6-13A0A0G2JGY3 119 aa10.38□□□□□ -0.75
Nup54-201ENSMUST00000038514 ScxQ64124 207 aa10.38□□□□□ -0.75
Nup54-201ENSMUST00000038514 Gm5142Q8C5X9 133 aa10.38□□□□□ -0.75
Nup54-201ENSMUST00000038514 Bahcc1Q3UHR0 2643 aa10.37□□□□□ -0.75
Nup54-201ENSMUST00000038514 Ifitm6A0A1B0GS75 124 aa10.37□□□□□ -0.75
Nup54-201ENSMUST00000038514 Ly6c2P0CW03 131 aa10.37□□□□□ -0.75
Nup54-201ENSMUST00000038514 Mzt1Q8BUR9 78 aa10.37□□□□□ -0.75
Nup54-201ENSMUST00000038514 Tmem223Q9CQE2 199 aaKnown RBP10.37□□□□□ -0.75
Nup54-201ENSMUST00000038514 Pdzd2E9Q1M1 2796 aa10.36□□□□□ -0.75
Nup54-201ENSMUST00000038514 Tep1P97499 2629 aa10.36□□□□□ -0.75
Nup54-201ENSMUST00000038514 Ank2Q8C8R3 3898 aa10.36□□□□□ -0.75
Nup54-201ENSMUST00000038514 Hbb-b2P02089 147 aa10.36□□□□□ -0.75
Nup54-201ENSMUST00000038514 Rif1Q6PR54 2419 aaKnown RBP10.35□□□□□ -0.75
Nup54-201ENSMUST00000038514 Ighv8-11A0A075B5X4 119 aa10.35□□□□□ -0.75
Nup54-201ENSMUST00000038514 Ntn5Q3UQ22 452 aa10.35□□□□□ -0.75
Nup54-201ENSMUST00000038514 Myo9aQ8C170 2542 aa10.35□□□□□ -0.75
Nup54-201ENSMUST00000038514 Nf1Q04690 2841 aa10.35□□□□□ -0.75
Nup54-201ENSMUST00000038514 7530416G11RikJ3QJX6 159 aa10.34□□□□□ -0.75
Nup54-201ENSMUST00000038514 Defa2P28309 93 aa10.34□□□□□ -0.75
Nup54-201ENSMUST00000038514 Defb2P82020 71 aa10.34□□□□□ -0.75
Nup54-201ENSMUST00000038514 Rpl39lQ9CQD0 51 aa10.34□□□□□ -0.75
Nup54-201ENSMUST00000038514 Gm5153P01627 120 aa10.33□□□□□ -0.76
Nup54-201ENSMUST00000038514 Usp24B1AY13 2617 aaKnown RBP10.33□□□□□ -0.76
Nup54-201ENSMUST00000038514 CubnQ9JLB4 3623 aa10.33□□□□□ -0.76
Nup54-201ENSMUST00000038514 Xirp2Q4U4S6 3784 aa10.33□□□□□ -0.76
Nup54-201ENSMUST00000038514 Igkv4-61A0A0G2JH00 117 aa10.32□□□□□ -0.76
Nup54-201ENSMUST00000038514 Gm7102J3QQ10 178 aa10.32□□□□□ -0.76
Nup54-201ENSMUST00000038514 Psors1c2Q80ZC9 134 aa10.32□□□□□ -0.76
Nup54-201ENSMUST00000038514 BsnO88737 3942 aa10.32□□□□□ -0.76
Nup54-201ENSMUST00000038514 Muc2Q80Z19 2680 aa10.32□□□□□ -0.76
Nup54-201ENSMUST00000038514 Klk11Q9QYN3 276 aa10.32□□□□□ -0.76
Nup54-201ENSMUST00000038514 Igkv8-18A0A0B4J1J3 123 aa10.31□□□□□ -0.76
Nup54-201ENSMUST00000038514 Igkv4-54A0A0G2JES9 117 aa10.31□□□□□ -0.76
Nup54-201ENSMUST00000038514 C530025M09RikF6RGA8 229 aa10.31□□□□□ -0.76
Nup54-201ENSMUST00000038514 Tcl1b3P56842 122 aa10.31□□□□□ -0.76
Nup54-201ENSMUST00000038514 Zfyve26Q5DU37 2529 aa10.31□□□□□ -0.76
Nup54-201ENSMUST00000038514 Rpl18aP62717 176 aaKnown RBP10.31□□□□□ -0.76
Nup54-201ENSMUST00000038514 Gm10845Q3UNY9 185 aa10.31□□□□□ -0.76
Nup54-201ENSMUST00000038514 Cystm1Q8K353 104 aa10.31□□□□□ -0.76
Nup54-201ENSMUST00000038514 Ankrd11E9Q4F7 2643 aa10.3□□□□□ -0.76
Nup54-201ENSMUST00000038514 D130052B06RikQ3UW13 202 aa10.3□□□□□ -0.76
Nup54-201ENSMUST00000038514 Hectd1Q69ZR2 2618 aaKnown RBP10.3□□□□□ -0.76
Nup54-201ENSMUST00000038514 Gm3618D3Z4P5 127 aa10.29□□□□□ -0.76
Nup54-201ENSMUST00000038514 Dand5Q76LW6 185 aa10.29□□□□□ -0.76
Nup54-201ENSMUST00000038514 A830031A19RikQ8BNT5 113 aa10.29□□□□□ -0.76
Nup54-201ENSMUST00000038514 Gm2916Q9D9B9 127 aa10.29□□□□□ -0.76
Nup54-201ENSMUST00000038514 Wnk1P83741 2377 aa10.29□□□□□ -0.76
Nup54-201ENSMUST00000038514 Tenm3Q9WTS6 2715 aa10.29□□□□□ -0.76
Nup54-201ENSMUST00000038514 Q9DAA7 145 aa10.29□□□□□ -0.76
Nup54-201ENSMUST00000038514 Igfn1Q3KNY0 2849 aa10.28□□□□□ -0.76
Nup54-201ENSMUST00000038514 C2cd3Q52KB6 2323 aa10.28□□□□□ -0.76
Nup54-201ENSMUST00000038514 Prh1P05142 261 aa10.28□□□□□ -0.76
Nup54-201ENSMUST00000038514 FlnaQ8BTM8 2647 aaKnown RBP10.27□□□□□ -0.76
Nup54-201ENSMUST00000038514 Trav9n-4A0A075B631 113 aa10.27□□□□□ -0.77
Nup54-201ENSMUST00000038514 Trav13-2A0A075B649 110 aa10.27□□□□□ -0.77
Nup54-201ENSMUST00000038514 Ighv1-59A0A0A6YXE0 117 aa10.27□□□□□ -0.77
Nup54-201ENSMUST00000038514 Csdc2Q91YQ3 154 aa10.27□□□□□ -0.77
Nup54-201ENSMUST00000038514 PrcdQ00LT2 53 aa10.26□□□□□ -0.77
Nup54-201ENSMUST00000038514 Ighv2-9A0A075B5Q5 116 aa10.25□□□□□ -0.77
Nup54-201ENSMUST00000038514 Gm20726G3UX18 150 aa10.25□□□□□ -0.77
Nup54-201ENSMUST00000038514 P01819 144 aa10.25□□□□□ -0.77
Nup54-201ENSMUST00000038514 Ighv10-3A0A075B5T6 119 aa10.25□□□□□ -0.77
Nup54-201ENSMUST00000038514 Tmem254aP0DN89 123 aa10.25□□□□□ -0.77
Nup54-201ENSMUST00000038514 Tmem254bP0DN90 123 aa10.25□□□□□ -0.77
Nup54-201ENSMUST00000038514 Tmem254cP0DN91 123 aa10.25□□□□□ -0.77
Nup54-201ENSMUST00000038514 CnbpP53996 178 aaKnown RBP10.25□□□□□ -0.77
Nup54-201ENSMUST00000038514 2010109I03RikQ9CQ11 111 aa10.25□□□□□ -0.77
Nup54-201ENSMUST00000038514 Igkv2-109A0A075B5K6 120 aa10.24□□□□□ -0.77
Nup54-201ENSMUST00000038514 Trbv13-2A0A140T8N6 113 aa10.24□□□□□ -0.77
Nup54-201ENSMUST00000038514 MifP34884 115 aaKnown RBP10.24□□□□□ -0.77
Nup54-201ENSMUST00000038514 E130208F15RikQ3UPV3 143 aa10.24□□□□□ -0.77
Nup54-201ENSMUST00000038514 Tmem86bQ497J1 226 aa10.24□□□□□ -0.77
Nup54-201ENSMUST00000038514 Gm9767G3X930 207 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 61.3 ms