RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Prh1P05142 261 aa11.54□□□□□ -0.56
Trim8-201ENSMUST00000026008 Ppp1r32Q148A4 427 aa11.54□□□□□ -0.56
Trim8-201ENSMUST00000026008 Ndufa12Q7TMF3 145 aaKnown RBP11.54□□□□□ -0.56
Trim8-201ENSMUST00000026008 Trav14d-3-dv8A0A075B619 120 aa11.52□□□□□ -0.57
Trim8-201ENSMUST00000026008 Cops9Q3U898 57 aa11.52□□□□□ -0.57
Trim8-201ENSMUST00000026008 Il19Q8CJ70 176 aa11.52□□□□□ -0.57
Trim8-201ENSMUST00000026008 Trav3-4A0A075B654 114 aa11.52□□□□□ -0.57
Trim8-201ENSMUST00000026008 Tmem213Q08EA8 116 aa11.52□□□□□ -0.57
Trim8-201ENSMUST00000026008 Gm10772F7AIG4 85 aa11.51□□□□□ -0.57
Trim8-201ENSMUST00000026008 Gm3233E9Q2H5 230 aa11.5□□□□□ -0.57
Trim8-201ENSMUST00000026008 Ss18l2Q9D174 77 aa11.5□□□□□ -0.57
Trim8-201ENSMUST00000026008 Esm1Q9QYY7 184 aa11.5□□□□□ -0.57
Trim8-201ENSMUST00000026008 GfyJ3KML8 504 aa11.5□□□□□ -0.57
Trim8-201ENSMUST00000026008 Gm10577Q3UDV9 132 aa11.5□□□□□ -0.57
Trim8-201ENSMUST00000026008 Gm28539A0A087WSL9 92 aa11.49□□□□□ -0.57
Trim8-201ENSMUST00000026008 Igkv1-117A0A140T8M0 119 aa11.49□□□□□ -0.57
Trim8-201ENSMUST00000026008 9430069I07RikQ9CX21 111 aa11.49□□□□□ -0.57
Trim8-201ENSMUST00000026008 Lage3Q9CR70 148 aa11.49□□□□□ -0.57
Trim8-201ENSMUST00000026008 5730596B20RikQ8BQ08 205 aa11.48□□□□□ -0.57
Trim8-201ENSMUST00000026008 Gpha2Q925Q5 128 aa11.48□□□□□ -0.57
Trim8-201ENSMUST00000026008 Pla2g1bQ9Z0Y2 146 aa11.48□□□□□ -0.57
Trim8-201ENSMUST00000026008 Trav13-1A0A075B644 110 aa11.48□□□□□ -0.57
Trim8-201ENSMUST00000026008 Gm26661M0QWV4 156 aa11.48□□□□□ -0.57
Trim8-201ENSMUST00000026008 Vmo1Q5SXG7 201 aa11.47□□□□□ -0.57
Trim8-201ENSMUST00000026008 Lyrm9Q3UN90 78 aa11.47□□□□□ -0.57
Trim8-201ENSMUST00000026008 Gm904Q3V2L5 102 aa11.47□□□□□ -0.57
Trim8-201ENSMUST00000026008 Chchd7Q8K2Q5 85 aa11.46□□□□□ -0.57
Trim8-201ENSMUST00000026008 PkigO70139 76 aa11.46□□□□□ -0.58
Trim8-201ENSMUST00000026008 Ly6c2P0CW03 131 aa11.46□□□□□ -0.58
Trim8-201ENSMUST00000026008 Atp5eP56382 52 aa11.46□□□□□ -0.58
Trim8-201ENSMUST00000026008 Trav13n-2A0A0G2JF93 110 aa11.45□□□□□ -0.58
Trim8-201ENSMUST00000026008 Defa16P50714 93 aa11.45□□□□□ -0.58
Trim8-201ENSMUST00000026008 MobpQ9D2P8 170 aa11.45□□□□□ -0.58
Trim8-201ENSMUST00000026008 Cd99Q8VCN6 175 aa11.45□□□□□ -0.58
Trim8-201ENSMUST00000026008 BB014433Q8C5R5 389 aa11.45□□□□□ -0.58
Trim8-201ENSMUST00000026008 Defb50Q6TU36 73 aa11.44□□□□□ -0.58
Trim8-201ENSMUST00000026008 Zfand2aQ9JII7 171 aa11.44□□□□□ -0.58
Trim8-201ENSMUST00000026008 4930524J08RikQ9CUJ5 163 aa11.43□□□□□ -0.58
Trim8-201ENSMUST00000026008 Cox6b1P56391 86 aaKnown RBP11.43□□□□□ -0.58
Trim8-201ENSMUST00000026008 Gm10549Q3URY4 149 aa11.43□□□□□ -0.58
Trim8-201ENSMUST00000026008 Krtap16-1A2A5X5 502 aa11.43□□□□□ -0.58
Trim8-201ENSMUST00000026008 Dand5Q76LW6 185 aa11.43□□□□□ -0.58
Trim8-201ENSMUST00000026008 FlnbQ80X90 2602 aaKnown RBP11.43□□□□□ -0.58
Trim8-201ENSMUST00000026008 Prss58Q8BW11 241 aa11.43□□□□□ -0.58
Trim8-201ENSMUST00000026008 AtrQ9JKK8 2635 aa11.42□□□□□ -0.58
Trim8-201ENSMUST00000026008 Rpl28P41105 137 aaKnown RBP11.41□□□□□ -0.58
Trim8-201ENSMUST00000026008 Tm2d2Q8R0I4 213 aa11.41□□□□□ -0.58
Trim8-201ENSMUST00000026008 Igkv4-72A0A0B4J1I4 117 aa11.4□□□□□ -0.58
Trim8-201ENSMUST00000026008 SbsponQ3UPR9 264 aa11.4□□□□□ -0.58
Trim8-201ENSMUST00000026008 Igkv6-13A0A0G2JGY3 119 aa11.4□□□□□ -0.58
Trim8-201ENSMUST00000026008 Igkv1-99F6XWB2 120 aa11.4□□□□□ -0.58
Trim8-201ENSMUST00000026008 Gm16381A0A1Y7VKT9 73 aa11.39□□□□□ -0.59
Trim8-201ENSMUST00000026008 Leap2Q91V13 76 aa11.39□□□□□ -0.59
Trim8-201ENSMUST00000026008 Defa2P28309 93 aa11.39□□□□□ -0.59
Trim8-201ENSMUST00000026008 Gm10735Q3US96 136 aa11.39□□□□□ -0.59
Trim8-201ENSMUST00000026008 Gm7102J3QQ10 178 aa11.38□□□□□ -0.59
Trim8-201ENSMUST00000026008 Tex15F8VPN2 2785 aa11.38□□□□□ -0.59
Trim8-201ENSMUST00000026008 Gm9767G3X930 207 aa11.38□□□□□ -0.59
Trim8-201ENSMUST00000026008 Xcl1P47993 114 aa11.38□□□□□ -0.59
Trim8-201ENSMUST00000026008 D130052B06RikQ3UW13 202 aa11.38□□□□□ -0.59
Trim8-201ENSMUST00000026008 Trav13-2A0A075B649 110 aa11.37□□□□□ -0.59
Trim8-201ENSMUST00000026008 Igkv4-54A0A0G2JES9 117 aa11.37□□□□□ -0.59
Trim8-201ENSMUST00000026008 Dnal4Q9DCM4 105 aa11.37□□□□□ -0.59
Trim8-201ENSMUST00000026008 Igkv4-53A0A0G2JFC6 119 aa11.37□□□□□ -0.59
Trim8-201ENSMUST00000026008 2010109I03RikQ9CQ11 111 aa11.37□□□□□ -0.59
Trim8-201ENSMUST00000026008 Defa25Q5G864 92 aa11.36□□□□□ -0.59
Trim8-201ENSMUST00000026008 CicQ924A2 2510 aa11.36□□□□□ -0.59
Trim8-201ENSMUST00000026008 Hbb-b2P02089 147 aa11.35□□□□□ -0.59
Trim8-201ENSMUST00000026008 Tenm4Q3UHK6 2771 aa11.35□□□□□ -0.59
Trim8-201ENSMUST00000026008 Ighv8-11A0A075B5X4 119 aa11.35□□□□□ -0.59
Trim8-201ENSMUST00000026008 PrcdQ00LT2 53 aa11.35□□□□□ -0.59
Trim8-201ENSMUST00000026008 Zfp951A0A087WRH0 451 aa11.33□□□□□ -0.6
Trim8-201ENSMUST00000026008 Ighv2-9-1A0A075B697 116 aa11.33□□□□□ -0.6
Trim8-201ENSMUST00000026008 Spink4O35679 86 aa11.32□□□□□ -0.6
Trim8-201ENSMUST00000026008 Igf1P05017 153 aa11.32□□□□□ -0.6
Trim8-201ENSMUST00000026008 Fbn1Q61554 2873 aaKnown RBP11.32□□□□□ -0.6
Trim8-201ENSMUST00000026008 Defa20Q45VN2 95 aa11.32□□□□□ -0.6
Trim8-201ENSMUST00000026008 Apoc4Q61268 124 aa11.32□□□□□ -0.6
Trim8-201ENSMUST00000026008 Nbeal2Q6ZQA0 2742 aa11.31□□□□□ -0.6
Trim8-201ENSMUST00000026008 Odf3l2Q3TZ65 277 aa11.31□□□□□ -0.6
Trim8-201ENSMUST00000026008 MifP34884 115 aaKnown RBP11.31□□□□□ -0.6
Trim8-201ENSMUST00000026008 Gm5142Q8C5X9 133 aa11.31□□□□□ -0.6
Trim8-201ENSMUST00000026008 Csdc2Q91YQ3 154 aa11.31□□□□□ -0.6
Trim8-201ENSMUST00000026008 Acyp1P56376 99 aa11.3□□□□□ -0.6
Trim8-201ENSMUST00000026008 Krtap24-1G3X9A2 248 aa11.29□□□□□ -0.6
Trim8-201ENSMUST00000026008 Rpl39lQ9CQD0 51 aa11.29□□□□□ -0.6
Trim8-201ENSMUST00000026008 Klk12B2RVZ0 247 aa11.28□□□□□ -0.6
Trim8-201ENSMUST00000026008 Igkv2-109A0A075B5K6 120 aa11.28□□□□□ -0.6
Trim8-201ENSMUST00000026008 Trav9n-4A0A075B631 113 aa11.28□□□□□ -0.6
Trim8-201ENSMUST00000026008 4930535I16RikQ9CUI2 172 aa11.28□□□□□ -0.6
Trim8-201ENSMUST00000026008 Hivep1Q03172 2688 aa11.28□□□□□ -0.6
Trim8-201ENSMUST00000026008 Gm43218A0A0G2JGT0 114 aa11.28□□□□□ -0.6
Trim8-201ENSMUST00000026008 Wfdc12Q9JHY3 85 aa11.28□□□□□ -0.6
Trim8-201ENSMUST00000026008 Erdr1J3QMM0 206 aa11.27□□□□□ -0.61
Trim8-201ENSMUST00000026008 Stab1Q8R4Y4 2571 aa11.26□□□□□ -0.61
Trim8-201ENSMUST00000026008 Gm20726G3UX18 150 aa11.26□□□□□ -0.61
Trim8-201ENSMUST00000026008 Trbv13-2A0A140T8N6 113 aa11.26□□□□□ -0.61
Trim8-201ENSMUST00000026008 Tmem86bQ497J1 226 aa11.26□□□□□ -0.61
Trim8-201ENSMUST00000026008 1810062G17RikG3X8Y2 129 aa11.25□□□□□ -0.61
Trim8-201ENSMUST00000026008 Smim26Q3V460 107 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 64.8 ms