RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Ighv1-56A0A0A6YXG2 117 aa9.68□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Gm42674D3YUT9 64 aa9.68□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Defa1P11477 93 aa9.68□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Defa16P50714 93 aa9.68□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Nupr2Q497P3 102 aa9.68□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Prss58Q8BW11 241 aa9.68□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Dnah11E9Q7N9 4488 aa9.67□□□□□ -0.86
Ercc1-201ENSMUST00000003645 CrxO54751 299 aa9.67□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Defb50Q6TU36 73 aa9.67□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Defb40Q70KL2 73 aa9.66□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Prelid3aQ8VE85 172 aa9.66□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Gm20730A0A075B5J6 119 aa9.65□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Igkv3-12A0A140T8P0 119 aa9.65□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Hbb-bsA8DUK4 147 aa9.65□□□□□ -0.86
Ercc1-201ENSMUST00000003645 U90926O08546 118 aa9.65□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Hbb-b1P02088 147 aa9.65□□□□□ -0.86
Ercc1-201ENSMUST00000003645 CnbpP53996 178 aaKnown RBP9.65□□□□□ -0.86
Ercc1-201ENSMUST00000003645 SrarpQ3ULG3 163 aa9.65□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Wfdc21Q8BTE6 63 aa9.65□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Plac1Q9JI83 173 aa9.65□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Vps13dB1ART2 4390 aa9.64□□□□□ -0.87
Ercc1-201ENSMUST00000003645 BaalcQ8VHV1 145 aa9.64□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Tspo2Q9CRZ8 162 aa9.64□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Gnb1lQ9EQ15 326 aa9.64□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Scgb1b15A0A087WP50 93 aa9.63□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Scgb1b19F6WYW0 93 aa9.63□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Gm9242J3QNY1 357 aa9.63□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Hist2h2beQ64524 126 aa9.63□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Hnrnpa3Q8BG05 379 aaKnown RBP9.63□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Dnah7cA0A087WR13 4024 aa9.63□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Igkv4-92A0A0B4J1I2 117 aa9.63□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Wfdc3Q14AE4 130 aa9.63□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Tmem86bQ497J1 226 aa9.63□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Isg15Q64339 161 aaKnown RBP9.63□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Iglc1A0A0G2JE99 106 aa9.62□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Gm44965A0A0N4SVR3 59 aa9.62□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Hsbp1l1B2RXB2 72 aa9.62□□□□□ -0.87
Ercc1-201ENSMUST00000003645 AponG3X9D6 251 aa9.62□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Defa9P50707 93 aa9.62□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Cks1bP61025 79 aa9.62□□□□□ -0.87
Ercc1-201ENSMUST00000003645 4930432M17RikQ3V0W9 174 aa9.62□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Gm10295Q8CCF3 114 aa9.62□□□□□ -0.87
Ercc1-201ENSMUST00000003645 4930442H23RikQ9D5G7 103 aa9.62□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Trav4n-4A0A075B615 110 aa9.61□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Igkv8-24A0A140T8P5 121 aa9.61□□□□□ -0.87
Ercc1-201ENSMUST00000003645 P01755 137 aa9.61□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Sprr4Q8CGN8 76 aa9.61□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Ssbp1Q9CYR0 152 aaKnown RBP9.61□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Cox8cA6H666 72 aa9.6□□□□□ -0.87
Ercc1-201ENSMUST00000003645 C530025M09RikF6RGA8 229 aa9.6□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Krtap10-4Q08EG8 221 aa9.6□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Ube2wQ8VDW4 151 aa9.6□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Cox7b2Q9D2H1 82 aa9.6□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Plac8Q9JI48 112 aa9.6□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Trav4-3A0A0B4J1K1 110 aa9.59□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Rmi2Q3UPE3 149 aa9.59□□□□□ -0.87
Ercc1-201ENSMUST00000003645 4930519P11RikQ9CUJ8 166 aa9.59□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Dppa2Q9CWH0 301 aa9.59□□□□□ -0.87
Ercc1-201ENSMUST00000003645 Gm35549A0A0N4SUS7 141 aa9.58□□□□□ -0.88
Ercc1-201ENSMUST00000003645 A730009L09RikA0A1B0GS82 72 aa9.58□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Lect2O88803 151 aa9.58□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Morn5Q9DAI9 170 aa9.58□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Dpm2Q9Z324 84 aa9.58□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Smim1P0C8K7 78 aa9.57□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Gm10837Q3UTT8 145 aa9.57□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Sprr1aQ62266 144 aa9.57□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Hrct1Q9D6B9 109 aa9.57□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Mzt1Q8BUR9 78 aa9.56□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Dnah2P0C6F1 4456 aa9.55□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Gm45753A0A1C7CYU8 86 aa9.55□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Gm867A0A1W2P7T4 151 aa9.55□□□□□ -0.88
Ercc1-201ENSMUST00000003645 9430015G10RikA2ASP7 199 aa9.55□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Triap1Q9D8Z2 76 aa9.55□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Erg28Q9ERY9 140 aa9.55□□□□□ -0.88
Ercc1-201ENSMUST00000003645 2310009B15RikA0A0A6YWI4 143 aa9.54□□□□□ -0.88
Ercc1-201ENSMUST00000003645 B230359F08RikA0A0B4J1K3 109 aa9.54□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Tcl1b5P56845 121 aa9.54□□□□□ -0.88
Ercc1-201ENSMUST00000003645 PscaP57096 123 aa9.54□□□□□ -0.88
Ercc1-201ENSMUST00000003645 TgO08710 2766 aa9.54□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Trav9d-4A0A0G2JG37 103 aa9.53□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Gm6812B1AXU1 112 aa9.53□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Ccl17F6R5P4 103 aa9.53□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Gm10735Q3US96 136 aa9.53□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Defb45Q3V490 66 aa9.53□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Camk2n2Q78WH7 79 aa9.53□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Pkd1O08852 4293 aa9.53□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Gm29289A0A087WPY7 166 aa9.52□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Defa10P50708 93 aa9.52□□□□□ -0.88
Ercc1-201ENSMUST00000003645 BB014433Q8C5R5 389 aa9.52□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Gm9903Q8C9Y8 129 aa9.52□□□□□ -0.88
Ercc1-201ENSMUST00000003645 Gm17577J3QNF7 156 aa9.51□□□□□ -0.89
Ercc1-201ENSMUST00000003645 Gm26727M0QWT1 121 aa9.51□□□□□ -0.89
Ercc1-201ENSMUST00000003645 4930544G11RikQ9CR99 193 aa9.51□□□□□ -0.89
Ercc1-201ENSMUST00000003645 1700010B08RikQ9DAI7 102 aa9.51□□□□□ -0.89
Ercc1-201ENSMUST00000003645 1700011M02RikB1AX35 88 aa9.5□□□□□ -0.89
Ercc1-201ENSMUST00000003645 Trav14-1A0A0G2JF94 121 aa9.5□□□□□ -0.89
Ercc1-201ENSMUST00000003645 Gm28374F6SG70 93 aa9.5□□□□□ -0.89
Ercc1-201ENSMUST00000003645 Plscr4P58196 326 aa9.5□□□□□ -0.89
Ercc1-201ENSMUST00000003645 Uqcc3Q8K2T4 89 aa9.5□□□□□ -0.89
Ercc1-201ENSMUST00000003645 Timm17bQ9Z0V7 172 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms