Protein–RNA interactions for Protein: J3QNY1

Gm9242, Predicted pseudogene 9242, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9242J3QNY1 Gm25239-201ENSMUST00000174915 86 ntBASIC24.28■■□□□ 1.48
Gm9242J3QNY1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Gm9242J3QNY1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Gm9242J3QNY1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gm9242J3QNY1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Gm9242J3QNY1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Gm9242J3QNY1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.77■■□□□ 1.24
Gm9242J3QNY1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Gm9242J3QNY1 Psd-208ENSMUST00000224556 2034 ntBASIC22.33■■□□□ 1.16
Gm9242J3QNY1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm9242J3QNY1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Gm9242J3QNY1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm9242J3QNY1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm9242J3QNY1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm9242J3QNY1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Gm9242J3QNY1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gm9242J3QNY1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm9242J3QNY1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm9242J3QNY1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm9242J3QNY1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Gm9242J3QNY1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm9242J3QNY1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm9242J3QNY1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm9242J3QNY1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm9242J3QNY1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm9242J3QNY1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm9242J3QNY1 Gm24109-201ENSMUST00000175489 103 ntBASIC21.14■□□□□ 0.97
Gm9242J3QNY1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm9242J3QNY1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm9242J3QNY1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm9242J3QNY1 Gm15042-201ENSMUST00000120212 883 ntBASIC21.02■□□□□ 0.96
Gm9242J3QNY1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm9242J3QNY1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Gm9242J3QNY1 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.92■□□□□ 0.94
Gm9242J3QNY1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.77■□□□□ 0.92
Gm9242J3QNY1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.72■□□□□ 0.91
Gm9242J3QNY1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm9242J3QNY1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Gm9242J3QNY1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm9242J3QNY1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm9242J3QNY1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm9242J3QNY1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm9242J3QNY1 Gm15045-201ENSMUST00000117359 883 ntBASIC20.55■□□□□ 0.88
Gm9242J3QNY1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Gm9242J3QNY1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm9242J3QNY1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm9242J3QNY1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm9242J3QNY1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm9242J3QNY1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm9242J3QNY1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm9242J3QNY1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm9242J3QNY1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm9242J3QNY1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm9242J3QNY1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm9242J3QNY1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm9242J3QNY1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.27■□□□□ 0.84
Gm9242J3QNY1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm9242J3QNY1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm9242J3QNY1 Gm23366-201ENSMUST00000175022 89 ntBASIC20.2■□□□□ 0.82
Gm9242J3QNY1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm9242J3QNY1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Gm9242J3QNY1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.08■□□□□ 0.81
Gm9242J3QNY1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.06■□□□□ 0.8
Gm9242J3QNY1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm9242J3QNY1 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.05■□□□□ 0.8
Gm9242J3QNY1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm9242J3QNY1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm9242J3QNY1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm9242J3QNY1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.03■□□□□ 0.8
Gm9242J3QNY1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Gm9242J3QNY1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Gm9242J3QNY1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm9242J3QNY1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm9242J3QNY1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm9242J3QNY1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm9242J3QNY1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.97■□□□□ 0.79
Gm9242J3QNY1 Zxda-201ENSMUST00000117281 2621 ntBASIC19.94■□□□□ 0.78
Gm9242J3QNY1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Gm9242J3QNY1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm9242J3QNY1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm9242J3QNY1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm9242J3QNY1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm9242J3QNY1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm9242J3QNY1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Gm9242J3QNY1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Gm9242J3QNY1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm9242J3QNY1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm9242J3QNY1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm9242J3QNY1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm9242J3QNY1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.8■□□□□ 0.76
Gm9242J3QNY1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm9242J3QNY1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm9242J3QNY1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm9242J3QNY1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.72■□□□□ 0.75
Gm9242J3QNY1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm9242J3QNY1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm9242J3QNY1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm9242J3QNY1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm9242J3QNY1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.65■□□□□ 0.74
Gm9242J3QNY1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms