RNA–Protein interactions for RNA: ENSMUST00000000109.10

Cntn1-201, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 5,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-201ENSMUST00000000109 Lrp4Q8VI56 1905 aa4.33□□□□□ -1.72
Cntn1-201ENSMUST00000000109 P84750 121 aa4.32□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Kiaa1549Q68FD9 1940 aa4.32□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Igkv4-92A0A0B4J1I2 117 aa4.32□□□□□ -1.72
Cntn1-201ENSMUST00000000109 P01786 117 aa4.32□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Ep300B2RWS6 2412 aa4.32□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Ighv2-2A0A075B5P8 116 aa4.32□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Odf1Q61999 247 aa4.32□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Spg11Q3UHA3 2430 aa4.32□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Ighv2-6-8A0A0A6YWY9 116 aa4.32□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Trav9n-2A0A0G2JDP3 113 aa4.32□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Igkv3-5A0A140T8M6 119 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Gm6217A0A1Y7VJK9 128 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Gm9887F6RFI0 207 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Ighv2-9A0A075B5Q5 116 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Ighv3-1A0A075B5S6 116 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Gm10518F6UQQ9 182 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Gm10553J3QPF1 123 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Cela2aP05208 271 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Brwd1Q921C3 2304 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Klk12B2RVZ0 247 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Pglyrp1O88593 182 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 P84751 237 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 4930564D02RikQ9D4S4 103 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Zfp292Q9Z2U2 2698 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 B9d2Q3UK10 175 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Defb13Q8R2I4 64 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Smg1Q8BKX6 3658 aaKnown RBP4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Zfyve26Q5DU37 2529 aa4.31□□□□□ -1.72
Cntn1-201ENSMUST00000000109 P01823 113 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Defb33Q30KN3 62 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Rpl39lQ9CQD0 51 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Q9CX25 107 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Rif1Q6PR54 2419 aaKnown RBP4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 P06320 134 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 SnurfQ9WU12 71 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Trav9-2A0A075B647 113 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Trav9-4A0A0B4J1K2 113 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 BlcapP62951 87 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Zfand3Q497H0 227 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 9130230L23RikQ8CC80 163 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Trav9n-4A0A075B631 113 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Trav9d-3A0A075B695 113 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Eif4ebp1Q60876 117 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Tmem223Q9CQE2 199 aaKnown RBP4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Obox2E9PXV9 151 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Tcte2E9PY37 120 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Reg3gO09049 174 aa4.3□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Igkv3-12A0A140T8P0 119 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Gm7257D3YX25 99 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 AvpP35455 168 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Gm26566Q8CAC1 153 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 4930470P17RikQ9D542 155 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Ighv3-3A0A0A6YWL2 116 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Gm10401E9Q3K6 71 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Tfpi2O35536 230 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 PlaurP35456 327 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Gphb5Q812B2 130 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Dkk4Q8VEJ3 221 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Wdr90Q6ZPG2 1874 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Adgrg4B7ZCC9 3073 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Ighv1-72P01751 139 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 A530084C06RikQ3UTW2 186 aa4.29□□□□□ -1.72
Cntn1-201ENSMUST00000000109 4930524J08RikQ9CUJ5 163 aa4.28□□□□□ -1.72
Cntn1-201ENSMUST00000000109 UqcrqQ9CQ69 82 aa4.28□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Chd8Q09XV5 2582 aaKnown RBP4.28□□□□□ -1.72
Cntn1-201ENSMUST00000000109 OtoglF7A4A7 2325 aa4.28□□□□□ -1.72
Cntn1-201ENSMUST00000000109 Igkv1-88A0A140T8N1 120 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Lama5Q61001 3718 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Csmd1Q923L3 3564 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 1810032O08RikE9PZV8 113 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 LhbO09108 141 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 NbasE9Q411 2356 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Ighv2-7A0A075B5Q8 116 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 1700011M02RikB1AX35 88 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Camk2n2Q78WH7 79 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Gm9821Q8K076 103 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Sec61bQ9CQS8 96 aaKnown RBP4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 GfyJ3KML8 504 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Cox7b2Q9D2H1 82 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Ash1lQ99MY8 2958 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Ube2d4D3YUH6 135 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 1700056E22RikF7CNM6 234 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Gm10577Q3UDV9 132 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 AI854703Q8BIN3 203 aa4.27□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Cspg4Q8VHY0 2327 aa4.26□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Igkv1-110A0A0B4J1I0 119 aa4.26□□□□□ -1.73
Cntn1-201ENSMUST00000000109 1700042G07RikB1AUF7 90 aa4.26□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Gm9970F6ZED4 185 aa4.26□□□□□ -1.73
Cntn1-201ENSMUST00000000109 BC025920Q3US60 128 aa4.26□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Wisp2Q9Z0G4 251 aa4.26□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Prh1P05142 261 aa4.26□□□□□ -1.73
Cntn1-201ENSMUST00000000109 SetxA2AKX3 2646 aa4.26□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Itpr1P11881 2749 aa4.26□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Trbv13-2A0A140T8N6 113 aa4.26□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Gm10647E9Q8X0 124 aa4.25□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Nop10Q9CQS2 64 aa4.25□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Dopey1Q8BL99 2399 aa4.25□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Gm17577J3QNF7 156 aa4.25□□□□□ -1.73
Cntn1-201ENSMUST00000000109 Edn3P48299 214 aa4.25□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 73.1 ms