RNA–Protein interactions for RNA: ENSMUST00000118976.8

Ccdc9-202, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-202ENSMUST00000118976 Gm9925F6T2U3 160 aa18.32■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 Klk1b4P00757 256 aa18.32■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 Gm11565A2A4M7 156 aa18.31■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 Tfpi2O35536 230 aa18.31■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 Rpl28P41105 137 aaKnown RBP18.31■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 Avpi1Q9D7H4 142 aa18.31■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 Cox6b1P56391 86 aaKnown RBP18.3■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 Vmo1Q5SXG7 201 aa18.3■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 Cdc42se2Q8BGH7 84 aa18.3■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 Q99M08 65 aa18.3■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 Sptbn4E9PX29 2561 aa18.29■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 Igf1P05017 153 aa18.29■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 Acyp1P56376 99 aa18.29■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 4930524J08RikQ9CUJ5 163 aa18.28■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 9430069I07RikQ9CX21 111 aa18.28■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 P01729 129 aa18.27■□□□□ 0.52
Ccdc9-202ENSMUST00000118976 Plac8l1Q08EJ0 177 aa18.27■□□□□ 0.51
Ccdc9-202ENSMUST00000118976 Taf15Q8BQ46 557 aaKnown RBP18.27■□□□□ 0.51
Ccdc9-202ENSMUST00000118976 Tm2d2Q8R0I4 213 aa18.27■□□□□ 0.51
Ccdc9-202ENSMUST00000118976 Akap6E9Q9K8 2307 aa18.27■□□□□ 0.51
Ccdc9-202ENSMUST00000118976 Rpl36aP83882 106 aaKnown RBP18.26■□□□□ 0.51
Ccdc9-202ENSMUST00000118976 P01745 121 aa18.25■□□□□ 0.51
Ccdc9-202ENSMUST00000118976 Itpr1P11881 2749 aa18.25■□□□□ 0.51
Ccdc9-202ENSMUST00000118976 Trav9d-4A0A0G2JG37 103 aa18.25■□□□□ 0.51
Ccdc9-202ENSMUST00000118976 Hist1h4aP62806 103 aaKnown RBP18.24■□□□□ 0.51
Ccdc9-202ENSMUST00000118976 Csmd2V9GX34 3611 aa18.24■□□□□ 0.51
Ccdc9-202ENSMUST00000118976 4930519P11RikQ9CUJ8 166 aa18.23■□□□□ 0.51
Ccdc9-202ENSMUST00000118976 Ucn2Q99ML8 113 aa18.21■□□□□ 0.51
Ccdc9-202ENSMUST00000118976 Spink1P09036 80 aa18.21■□□□□ 0.51
Ccdc9-202ENSMUST00000118976 4930544G11RikQ9CR99 193 aa18.21■□□□□ 0.51
Ccdc9-202ENSMUST00000118976 A830031A19RikQ8BNT5 113 aa18.2■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 SonQ9QX47 2444 aaKnown RBP18.19■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 GfyJ3KML8 504 aa18.19■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 D130052B06RikQ3UW13 202 aa18.19■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Igkv1-117A0A140T8M0 119 aa18.18■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Gm10647E9Q8X0 124 aa18.18■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 CrygaP04345 174 aa18.18■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Klk11Q9QYN3 276 aa18.18■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Pkd1l2Q7TN88 2461 aa18.18■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Igkv1-35A0A0G2JDE5 120 aa18.18■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Gm3618D3Z4P5 127 aa18.18■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Ndufa12Q7TMF3 145 aaKnown RBP18.18■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Gm2916Q9D9B9 127 aa18.18■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Ighv2-9-1A0A075B697 116 aa18.17■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 7530416G11RikJ3QJX6 159 aa18.17■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Gm3443F7CCV5 94 aa18.17■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Dnal4Q9DCM4 105 aa18.17■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Gm16381A0A1Y7VKT9 73 aa18.16■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Sh2d1aO88890 126 aa18.16■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Trav13-4-dv7A0A075B6C2 110 aa18.15■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 AcacbE9Q4Z2 2448 aa18.15■□□□□ 0.5
Ccdc9-202ENSMUST00000118976 Gm7849D3YX03 116 aa18.14■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Srsf12Q8C8K3 266 aa18.14■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Gm10300Q8C8P7 189 aa18.14■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Defb29Q8BGW9 78 aa18.14■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Defb50Q6TU36 73 aa18.13■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 NbeaQ9EPN1 2936 aa18.12■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Ppp1r32Q148A4 427 aa18.12■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Pfn2Q9JJV2 140 aa18.12■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Gm20726G3UX18 150 aa18.11■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Rpl18aP62717 176 aaKnown RBP18.11■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Ntn5Q3UQ22 452 aa18.11■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Gm9195A0A140LHT4 2805 aa18.1■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Ighv1-56A0A0A6YXG2 117 aa18.1■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Prp2P05143 317 aa18.09■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Igkv6-13A0A0G2JGY3 119 aa18.08■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Hbb-b2P02089 147 aa18.08■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Dand5Q76LW6 185 aa18.08■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Zfand2aQ9JII7 171 aa18.08■□□□□ 0.49
Ccdc9-202ENSMUST00000118976 Defb42Q8BVB5 75 aa18.07■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 Lrrk2Q5S006 2527 aa18.07■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 Ighv8-11A0A075B5X4 119 aa18.07■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 P01755 137 aa18.06■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 Notch3Q61982 2318 aa18.06■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 1810062G17RikG3X8Y2 129 aa18.06■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 NrgnP60761 78 aa18.05■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 Crlf1Q9JM58 425 aa18.05■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 4930518I15RikQ3V2W7 57 aa18.04■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 MobpQ9D2P8 170 aa18.04■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 Gm8439G3UWA7 96 aa18.03■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 Abca2P41234 2434 aa18.03■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 Itpr3P70227 2670 aa18.03■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 Gm10772F7AIG4 85 aa18.03■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 Defa4P28311 92 aa18.03■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 Rps28P62858 69 aaKnown RBP18.03■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 Nop10Q9CQS2 64 aa18.03■□□□□ 0.48
Ccdc9-202ENSMUST00000118976 Trav9d-3A0A075B695 113 aa18.01■□□□□ 0.47
Ccdc9-202ENSMUST00000118976 Igkv1-99F6XWB2 120 aa18.01■□□□□ 0.47
Ccdc9-202ENSMUST00000118976 Serp2Q6TAW2 65 aa18.01■□□□□ 0.47
Ccdc9-202ENSMUST00000118976 B230359F08RikA0A0B4J1K3 109 aa18■□□□□ 0.47
Ccdc9-202ENSMUST00000118976 Ifitm6A0A1B0GS75 124 aa18■□□□□ 0.47
Ccdc9-202ENSMUST00000118976 Lypd5Q9D7Z7 256 aa18■□□□□ 0.47
Ccdc9-202ENSMUST00000118976 Arid1bE9Q4N7 2244 aa18■□□□□ 0.47
Ccdc9-202ENSMUST00000118976 Chd9Q8BYH8 2885 aa18■□□□□ 0.47
Ccdc9-202ENSMUST00000118976 Cystm1Q8K353 104 aa18■□□□□ 0.47
Ccdc9-202ENSMUST00000118976 Smim26Q3V460 107 aa17.99■□□□□ 0.47
Ccdc9-202ENSMUST00000118976 Chchd7Q8K2Q5 85 aa17.98■□□□□ 0.47
Ccdc9-202ENSMUST00000118976 PrlhG3UWC3 86 aa17.98■□□□□ 0.47
Ccdc9-202ENSMUST00000118976 OtoglF7A4A7 2325 aa17.97■□□□□ 0.47
Ccdc9-202ENSMUST00000118976 Ighv1-49A0A0A6YWX2 117 aa17.97■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 65.3 ms