RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Fxyd5P97808 178 aa6.1□□□□□ -1.43
Scn8a-204ENSMUST00000108909 Ndufc1Q9CQY9 76 aa6.1□□□□□ -1.43
Scn8a-204ENSMUST00000108909 NipblQ6KCD5 2798 aaKnown RBP6.1□□□□□ -1.43
Scn8a-204ENSMUST00000108909 P01747 120 aa6.1□□□□□ -1.43
Scn8a-204ENSMUST00000108909 Rpl18aP62717 176 aaKnown RBP6.1□□□□□ -1.43
Scn8a-204ENSMUST00000108909 Ighv1-52A0A0A6YXC3 117 aa6.1□□□□□ -1.43
Scn8a-204ENSMUST00000108909 Ly6g6dQ9Z1Q3 135 aa6.1□□□□□ -1.43
Scn8a-204ENSMUST00000108909 4930546C10RikE9Q4Y3 121 aa6.1□□□□□ -1.43
Scn8a-204ENSMUST00000108909 Spry4Q9WTP2 300 aa6.1□□□□□ -1.43
Scn8a-204ENSMUST00000108909 Tfpi2O35536 230 aa6.09□□□□□ -1.43
Scn8a-204ENSMUST00000108909 Vpreb3D3Z6J4 130 aa6.09□□□□□ -1.43
Scn8a-204ENSMUST00000108909 Camk2n2Q78WH7 79 aa6.09□□□□□ -1.43
Scn8a-204ENSMUST00000108909 Gm12689Q8BQU9 117 aa6.09□□□□□ -1.43
Scn8a-204ENSMUST00000108909 Ighv1-11A0A0A6YWI9 117 aa6.09□□□□□ -1.43
Scn8a-204ENSMUST00000108909 Klk11Q9QYN3 276 aa6.09□□□□□ -1.43
Scn8a-204ENSMUST00000108909 Psmb11Q8BG41 302 aa6.09□□□□□ -1.43
Scn8a-204ENSMUST00000108909 Gm37389A0A0A6YW05 95 aa6.09□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Fam110dQ80X91 271 aa6.09□□□□□ -1.44
Scn8a-204ENSMUST00000108909 CstadQ9D245 104 aa6.09□□□□□ -1.44
Scn8a-204ENSMUST00000108909 GfyJ3KML8 504 aa6.09□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Trav9n-4A0A075B631 113 aa6.08□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Gm16223Q8CBM3 117 aa6.08□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Ighv2-7A0A075B5Q8 116 aa6.08□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Igkv4-92A0A0B4J1I2 117 aa6.08□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Gm21994F6T2D2 329 aa6.08□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Prop1P97458 223 aa6.08□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Gm15557A6PWY0 234 aa6.08□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Timm17bQ9Z0V7 172 aa6.08□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Ighv3-1A0A075B5S6 116 aa6.08□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Znf239P24399 201 aa6.07□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Stab2Q8R4U0 2559 aa6.07□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Ighv1-75A0A075B5Y2 117 aa6.07□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Igkv8-18A0A0B4J1J3 123 aa6.07□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Gm37988J3QM41 62 aa6.07□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Klk9Q32M27 251 aa6.07□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Ep400Q8CHI8 3072 aaKnown RBP6.07□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Q9D8Q6 235 aa6.07□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Cyyr1Q8VIH7 165 aa6.07□□□□□ -1.44
Scn8a-204ENSMUST00000108909 P01823 113 aa6.07□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Fhl1P97447 280 aaKnown RBP6.07□□□□□ -1.44
Scn8a-204ENSMUST00000108909 TshbP12656 138 aa6.07□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Ighv8-11A0A075B5X4 119 aa6.06□□□□□ -1.44
Scn8a-204ENSMUST00000108909 P01643 108 aa6.06□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Pkd1l1Q8R526 2615 aa6.06□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Gm5878E9PUB3 99 aa6.06□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Smrp1Q2MH31 260 aa6.06□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Gm17521F6QAC8 156 aa6.06□□□□□ -1.44
Scn8a-204ENSMUST00000108909 P01729 129 aa6.06□□□□□ -1.44
Scn8a-204ENSMUST00000108909 9530003J23RikQ8BM26 151 aa6.06□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Cox7b2Q9D2H1 82 aa6.06□□□□□ -1.44
Scn8a-204ENSMUST00000108909 CdsnQ7TPC1 561 aa6.05□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Edn3P48299 214 aa6.05□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Spink13Q3UTS8 97 aa6.05□□□□□ -1.44
Scn8a-204ENSMUST00000108909 A130051J06RikQ8CAU1 227 aa6.05□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Ebi3O35228 228 aa6.05□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Ndufb1P0DN34 57 aa6.05□□□□□ -1.44
Scn8a-204ENSMUST00000108909 5730596B20RikQ8BQ08 205 aa6.04□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Tex15F8VPN2 2785 aa6.04□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Ube2d4D3YUH6 135 aa6.04□□□□□ -1.44
Scn8a-204ENSMUST00000108909 1520401A03RikA0A0J9YVH6 598 aa6.04□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Ighv1-85A0A075B5Y6 117 aa6.04□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Fam19a5Q91WE9 132 aa6.04□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Ube2aQ9Z255 152 aa6.04□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Ighv12-3A0A075B5T1 117 aa6.03□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Dnah12Q3V0Q1 3086 aa6.03□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Ighv1-62-1A0A075B5U3 116 aa6.03□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Igkv3-5A0A140T8M6 119 aa6.03□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Atox1O08997 68 aaKnown RBP6.03□□□□□ -1.44
Scn8a-204ENSMUST00000108909 SrarpQ3ULG3 163 aa6.03□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Csdc2Q91YQ3 154 aa6.03□□□□□ -1.44
Scn8a-204ENSMUST00000108909 2010109I03RikQ9CQ11 111 aa6.03□□□□□ -1.44
Scn8a-204ENSMUST00000108909 9130230L23RikQ8CC80 163 aa6.03□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Gm19935A0A1B0GSF9 52 aa6.03□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Gm9805F6YK59 57 aa6.03□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Ighv1-72P01751 139 aa6.03□□□□□ -1.44
Scn8a-204ENSMUST00000108909 Cox7bP56393 80 aa6.03□□□□□ -1.44
Scn8a-204ENSMUST00000108909 E030018B13RikJ3QMS9 113 aa6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Zfand3Q497H0 227 aa6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Eif4ebp1Q60876 117 aa6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Igkv1-117A0A140T8M0 119 aa6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Ccl21aP84444 133 aa6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Ccl21bP86792 133 aa6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Ccl21cP86793 133 aa6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Ighv1-61P01749 117 aa6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Tmem223Q9CQE2 199 aaKnown RBP6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 DspE9Q557 2883 aaKnown RBP6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Gm21748Q3UE70 102 aa6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 ScxQ64124 207 aa6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 4930470P17RikQ9D542 155 aa6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Nbeal2Q6ZQA0 2742 aa6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 P01820 115 aa6.02□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Ighv1-82A0A0G2JEU7 117 aa6.01□□□□□ -1.45
Scn8a-204ENSMUST00000108909 4930432M17RikQ3V0W9 174 aa6.01□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Esm1Q9QYY7 184 aa6.01□□□□□ -1.45
Scn8a-204ENSMUST00000108909 P06320 134 aa6.01□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Cdip1Q9DB75 208 aa6.01□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Serp1Q9Z1W5 66 aa6.01□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Gm12353A2AGJ4 60 aa6.01□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Ube2d1P61080 147 aaKnown RBP6.01□□□□□ -1.45
Scn8a-204ENSMUST00000108909 Q9CX25 107 aa6.01□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms