RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Gm904Q3V2L5 102 aa10.65□□□□□ -0.7
Nup54-201ENSMUST00000038514 Gm9922Q8C3P1 144 aa10.65□□□□□ -0.7
Nup54-201ENSMUST00000038514 RetnQ99P87 114 aa10.65□□□□□ -0.7
Nup54-201ENSMUST00000038514 Gm28539A0A087WSL9 92 aa10.65□□□□□ -0.71
Nup54-201ENSMUST00000038514 SbsponQ3UPR9 264 aa10.65□□□□□ -0.71
Nup54-201ENSMUST00000038514 SvipQ3UZP4 77 aa10.65□□□□□ -0.71
Nup54-201ENSMUST00000038514 Atp5g1Q9CR84 136 aa10.65□□□□□ -0.71
Nup54-201ENSMUST00000038514 CrygaP04345 174 aa10.64□□□□□ -0.71
Nup54-201ENSMUST00000038514 Celsr2Q9R0M0 2920 aa10.63□□□□□ -0.71
Nup54-201ENSMUST00000038514 Notch3Q61982 2318 aa10.63□□□□□ -0.71
Nup54-201ENSMUST00000038514 PrlhG3UWC3 86 aa10.63□□□□□ -0.71
Nup54-201ENSMUST00000038514 9430069I07RikQ9CX21 111 aa10.63□□□□□ -0.71
Nup54-201ENSMUST00000038514 Cd164l2Q9D6W7 172 aa10.63□□□□□ -0.71
Nup54-201ENSMUST00000038514 Kmt2bO08550 2713 aa10.63□□□□□ -0.71
Nup54-201ENSMUST00000038514 PemtQ61907 199 aa10.62□□□□□ -0.71
Nup54-201ENSMUST00000038514 MalO09198 153 aa10.62□□□□□ -0.71
Nup54-201ENSMUST00000038514 SelenowP63300 88 aa10.62□□□□□ -0.71
Nup54-201ENSMUST00000038514 Pglyrp4Q0VB07 374 aa10.62□□□□□ -0.71
Nup54-201ENSMUST00000038514 Spink10Q8CAC8 162 aa10.62□□□□□ -0.71
Nup54-201ENSMUST00000038514 Ndufa3Q9CQ91 84 aa10.61□□□□□ -0.71
Nup54-201ENSMUST00000038514 Ep300B2RWS6 2412 aa10.61□□□□□ -0.71
Nup54-201ENSMUST00000038514 Nav3Q80TN7 2359 aa10.61□□□□□ -0.71
Nup54-201ENSMUST00000038514 Gm7075D3Z497 112 aa10.61□□□□□ -0.71
Nup54-201ENSMUST00000038514 Gm10549Q3URY4 149 aa10.61□□□□□ -0.71
Nup54-201ENSMUST00000038514 Esm1Q9QYY7 184 aa10.61□□□□□ -0.71
Nup54-201ENSMUST00000038514 Trav9d-4A0A0G2JG37 103 aa10.6□□□□□ -0.71
Nup54-201ENSMUST00000038514 Gm5089A1L3C8 106 aa10.6□□□□□ -0.71
Nup54-201ENSMUST00000038514 Ccl21aP84444 133 aa10.6□□□□□ -0.71
Nup54-201ENSMUST00000038514 Ccl21bP86792 133 aa10.6□□□□□ -0.71
Nup54-201ENSMUST00000038514 Ccl21cP86793 133 aa10.6□□□□□ -0.71
Nup54-201ENSMUST00000038514 CdsnQ7TPC1 561 aa10.6□□□□□ -0.71
Nup54-201ENSMUST00000038514 Nop10Q9CQS2 64 aa10.6□□□□□ -0.71
Nup54-201ENSMUST00000038514 NbasE9Q411 2356 aa10.6□□□□□ -0.71
Nup54-201ENSMUST00000038514 Lage3Q9CR70 148 aa10.59□□□□□ -0.71
Nup54-201ENSMUST00000038514 Crlf1Q9JM58 425 aa10.59□□□□□ -0.71
Nup54-201ENSMUST00000038514 Chd8Q09XV5 2582 aaKnown RBP10.59□□□□□ -0.71
Nup54-201ENSMUST00000038514 Prp2P05143 317 aa10.59□□□□□ -0.71
Nup54-201ENSMUST00000038514 Vmo1Q5SXG7 201 aa10.59□□□□□ -0.71
Nup54-201ENSMUST00000038514 Trav14d-3-dv8A0A075B619 120 aa10.58□□□□□ -0.72
Nup54-201ENSMUST00000038514 Trav13-4-dv7A0A075B6C2 110 aa10.58□□□□□ -0.72
Nup54-201ENSMUST00000038514 Gm10772F7AIG4 85 aa10.58□□□□□ -0.72
Nup54-201ENSMUST00000038514 GfyJ3KML8 504 aa10.58□□□□□ -0.72
Nup54-201ENSMUST00000038514 SmcpP15265 143 aa10.58□□□□□ -0.72
Nup54-201ENSMUST00000038514 Ppp1r32Q148A4 427 aa10.58□□□□□ -0.72
Nup54-201ENSMUST00000038514 Gm10300Q8C8P7 189 aa10.58□□□□□ -0.72
Nup54-201ENSMUST00000038514 Gm867A0A1W2P7T4 151 aa10.58□□□□□ -0.72
Nup54-201ENSMUST00000038514 5730596B20RikQ8BQ08 205 aa10.58□□□□□ -0.72
Nup54-201ENSMUST00000038514 Chchd7Q8K2Q5 85 aa10.58□□□□□ -0.72
Nup54-201ENSMUST00000038514 Tm2d2Q8R0I4 213 aa10.58□□□□□ -0.72
Nup54-201ENSMUST00000038514 Trav9d-3A0A075B695 113 aa10.57□□□□□ -0.72
Nup54-201ENSMUST00000038514 Trav11A0A0B4J1J9 114 aa10.57□□□□□ -0.72
Nup54-201ENSMUST00000038514 Rpl28P41105 137 aaKnown RBP10.57□□□□□ -0.72
Nup54-201ENSMUST00000038514 Defb50Q6TU36 73 aa10.57□□□□□ -0.72
Nup54-201ENSMUST00000038514 FlncQ8VHX6 2726 aaKnown RBP10.57□□□□□ -0.72
Nup54-201ENSMUST00000038514 4930544G11RikQ9CR99 193 aa10.57□□□□□ -0.72
Nup54-201ENSMUST00000038514 Gm10647E9Q8X0 124 aa10.56□□□□□ -0.72
Nup54-201ENSMUST00000038514 Chd9Q8BYH8 2885 aa10.56□□□□□ -0.72
Nup54-201ENSMUST00000038514 Cox6b1P56391 86 aaKnown RBP10.55□□□□□ -0.72
Nup54-201ENSMUST00000038514 Trav3-4A0A075B654 114 aa10.55□□□□□ -0.72
Nup54-201ENSMUST00000038514 Gpha2Q925Q5 128 aa10.55□□□□□ -0.72
Nup54-201ENSMUST00000038514 Smim20D3Z7Q2 69 aa10.54□□□□□ -0.72
Nup54-201ENSMUST00000038514 PkigO70139 76 aa10.54□□□□□ -0.72
Nup54-201ENSMUST00000038514 Zfand2aQ9JII7 171 aa10.54□□□□□ -0.72
Nup54-201ENSMUST00000038514 Ptpn13Q64512 2453 aa10.54□□□□□ -0.72
Nup54-201ENSMUST00000038514 Ighv2-9-1A0A075B697 116 aa10.54□□□□□ -0.72
Nup54-201ENSMUST00000038514 Igkv1-117A0A140T8M0 119 aa10.54□□□□□ -0.72
Nup54-201ENSMUST00000038514 Mapk1ip1lQ8BH93 242 aa10.54□□□□□ -0.72
Nup54-201ENSMUST00000038514 4930524J08RikQ9CUJ5 163 aa10.54□□□□□ -0.72
Nup54-201ENSMUST00000038514 MobpQ9D2P8 170 aa10.54□□□□□ -0.72
Nup54-201ENSMUST00000038514 Nbeal1E9PYP2 2688 aa10.53□□□□□ -0.72
Nup54-201ENSMUST00000038514 Usp9xP70398 2559 aaKnown RBP10.52□□□□□ -0.72
Nup54-201ENSMUST00000038514 Ighv1-49A0A0A6YWX2 117 aa10.52□□□□□ -0.73
Nup54-201ENSMUST00000038514 Apoc4Q61268 124 aa10.52□□□□□ -0.73
Nup54-201ENSMUST00000038514 P01755 137 aa10.52□□□□□ -0.73
Nup54-201ENSMUST00000038514 Cox7a1P56392 80 aa10.52□□□□□ -0.73
Nup54-201ENSMUST00000038514 BC067074F6RXI4 2391 aa10.52□□□□□ -0.73
Nup54-201ENSMUST00000038514 Igkv4-72A0A0B4J1I4 117 aa10.51□□□□□ -0.73
Nup54-201ENSMUST00000038514 Ndufa12Q7TMF3 145 aaKnown RBP10.51□□□□□ -0.73
Nup54-201ENSMUST00000038514 BB014433Q8C5R5 389 aa10.51□□□□□ -0.73
Nup54-201ENSMUST00000038514 Krtap16-1A2A5X5 502 aa10.51□□□□□ -0.73
Nup54-201ENSMUST00000038514 Sh2d1aO88890 126 aa10.51□□□□□ -0.73
Nup54-201ENSMUST00000038514 Rpl35aO55142 110 aa10.5□□□□□ -0.73
Nup54-201ENSMUST00000038514 Xcl1P47993 114 aa10.5□□□□□ -0.73
Nup54-201ENSMUST00000038514 Acyp1P56376 99 aa10.5□□□□□ -0.73
Nup54-201ENSMUST00000038514 Pfn2Q9JJV2 140 aa10.5□□□□□ -0.73
Nup54-201ENSMUST00000038514 Abca12E9Q876 2595 aa10.5□□□□□ -0.73
Nup54-201ENSMUST00000038514 Igkv1-35A0A0G2JDE5 120 aa10.5□□□□□ -0.73
Nup54-201ENSMUST00000038514 Trav13d-4A0A0G2JFX3 110 aa10.49□□□□□ -0.73
Nup54-201ENSMUST00000038514 Defa1P11477 93 aa10.49□□□□□ -0.73
Nup54-201ENSMUST00000038514 Chd6A3KFM7 2711 aa10.48□□□□□ -0.73
Nup54-201ENSMUST00000038514 Lyrm9Q3UN90 78 aa10.48□□□□□ -0.73
Nup54-201ENSMUST00000038514 Spata25Q9DA57 226 aa10.48□□□□□ -0.73
Nup54-201ENSMUST00000038514 B230359F08RikA0A0B4J1K3 109 aa10.47□□□□□ -0.73
Nup54-201ENSMUST00000038514 Defb29Q8BGW9 78 aa10.47□□□□□ -0.73
Nup54-201ENSMUST00000038514 Ss18l2Q9D174 77 aa10.47□□□□□ -0.73
Nup54-201ENSMUST00000038514 Gm16381A0A1Y7VKT9 73 aa10.46□□□□□ -0.74
Nup54-201ENSMUST00000038514 Ankrd17Q99NH0 2603 aaKnown RBP10.45□□□□□ -0.74
Nup54-201ENSMUST00000038514 Cep192E9Q4Y4 2514 aaKnown RBP10.45□□□□□ -0.74
Nup54-201ENSMUST00000038514 Gm43218A0A0G2JGT0 114 aa10.45□□□□□ -0.74
Nup54-201ENSMUST00000038514 Gm7257D3YX25 99 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms