RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Ube2e2Q91W82 201 aa11.17□□□□□ -0.62
Usp4-201ENSMUST00000035237 Atp5g1Q9CR84 136 aa11.17□□□□□ -0.62
Usp4-201ENSMUST00000035237 Pfn2Q9JJV2 140 aa11.17□□□□□ -0.62
Usp4-201ENSMUST00000035237 Gm20726G3UX18 150 aa11.17□□□□□ -0.62
Usp4-201ENSMUST00000035237 Trav4d-3A0A075B625 110 aa11.16□□□□□ -0.62
Usp4-201ENSMUST00000035237 Defa4P28311 92 aa11.16□□□□□ -0.62
Usp4-201ENSMUST00000035237 Spink12Q9D256 87 aa11.16□□□□□ -0.62
Usp4-201ENSMUST00000035237 Hivep2Q3UHF7 2430 aa11.16□□□□□ -0.62
Usp4-201ENSMUST00000035237 Reg3gO09049 174 aa11.16□□□□□ -0.62
Usp4-201ENSMUST00000035237 Rpl32P62911 135 aaKnown RBP11.16□□□□□ -0.62
Usp4-201ENSMUST00000035237 Tmem213Q08EA8 116 aa11.16□□□□□ -0.62
Usp4-201ENSMUST00000035237 Pkd1l2Q7TN88 2461 aa11.15□□□□□ -0.62
Usp4-201ENSMUST00000035237 Ighv1-52A0A0A6YXC3 117 aa11.15□□□□□ -0.62
Usp4-201ENSMUST00000035237 Trav9d-4A0A0G2JG37 103 aa11.15□□□□□ -0.62
Usp4-201ENSMUST00000035237 Sprr3O09116 238 aa11.15□□□□□ -0.62
Usp4-201ENSMUST00000035237 Gm815Q3UWS2 115 aa11.15□□□□□ -0.62
Usp4-201ENSMUST00000035237 Ighv2-3A0A075B696 115 aa11.14□□□□□ -0.63
Usp4-201ENSMUST00000035237 Defa7P50705 93 aa11.14□□□□□ -0.63
Usp4-201ENSMUST00000035237 Atp5eP56382 52 aa11.14□□□□□ -0.63
Usp4-201ENSMUST00000035237 Gatd1Q8BFQ8 220 aa11.14□□□□□ -0.63
Usp4-201ENSMUST00000035237 Ighv1-72P01751 139 aa11.14□□□□□ -0.63
Usp4-201ENSMUST00000035237 SelenowP63300 88 aa11.14□□□□□ -0.63
Usp4-201ENSMUST00000035237 Defb29Q8BGW9 78 aa11.14□□□□□ -0.63
Usp4-201ENSMUST00000035237 BB014433Q8C5R5 389 aa11.13□□□□□ -0.63
Usp4-201ENSMUST00000035237 Bles03Q8VD62 251 aa11.13□□□□□ -0.63
Usp4-201ENSMUST00000035237 4930442H23RikQ9D5G7 103 aa11.13□□□□□ -0.63
Usp4-201ENSMUST00000035237 Ly6hQ9WUC3 139 aa11.13□□□□□ -0.63
Usp4-201ENSMUST00000035237 Prr9Q8BV84 116 aa11.12□□□□□ -0.63
Usp4-201ENSMUST00000035237 Dnal4Q9DCM4 105 aa11.12□□□□□ -0.63
Usp4-201ENSMUST00000035237 Gcn1E9PVA8 2671 aaKnown RBP11.12□□□□□ -0.63
Usp4-201ENSMUST00000035237 Cops9Q3U898 57 aa11.11□□□□□ -0.63
Usp4-201ENSMUST00000035237 Ighv1-5A0A0A6YWG2 117 aa11.11□□□□□ -0.63
Usp4-201ENSMUST00000035237 Pglyrp4Q0VB07 374 aa11.11□□□□□ -0.63
Usp4-201ENSMUST00000035237 P01738 130 aa11.11□□□□□ -0.63
Usp4-201ENSMUST00000035237 Hbb-b2P02089 147 aa11.11□□□□□ -0.63
Usp4-201ENSMUST00000035237 Ang3P97802 145 aa11.11□□□□□ -0.63
Usp4-201ENSMUST00000035237 SvipQ3UZP4 77 aa11.11□□□□□ -0.63
Usp4-201ENSMUST00000035237 Trav14d-3-dv8A0A075B619 120 aa11.1□□□□□ -0.63
Usp4-201ENSMUST00000035237 CdsnQ7TPC1 561 aa11.1□□□□□ -0.63
Usp4-201ENSMUST00000035237 Ighv1-58A0A075B5W9 117 aa11.1□□□□□ -0.63
Usp4-201ENSMUST00000035237 Gm10490F6VBM2 120 aa11.1□□□□□ -0.63
Usp4-201ENSMUST00000035237 Lst1O08843 95 aa11.1□□□□□ -0.63
Usp4-201ENSMUST00000035237 Gm21994F6T2D2 329 aa11.1□□□□□ -0.63
Usp4-201ENSMUST00000035237 CenpwQ3URR0 86 aa11.1□□□□□ -0.63
Usp4-201ENSMUST00000035237 Morn3Q8C5T4 241 aa11.1□□□□□ -0.63
Usp4-201ENSMUST00000035237 Igkv6-13A0A0G2JGY3 119 aa11.09□□□□□ -0.63
Usp4-201ENSMUST00000035237 PlaurP35456 327 aa11.09□□□□□ -0.63
Usp4-201ENSMUST00000035237 Gm7102J3QQ10 178 aa11.09□□□□□ -0.63
Usp4-201ENSMUST00000035237 Prss58Q8BW11 241 aa11.08□□□□□ -0.64
Usp4-201ENSMUST00000035237 Ighv1-11A0A0A6YWI9 117 aa11.08□□□□□ -0.64
Usp4-201ENSMUST00000035237 Ighv2-6-8A0A0A6YWY9 116 aa11.08□□□□□ -0.64
Usp4-201ENSMUST00000035237 Smlr1J3QMJ4 66 aa11.07□□□□□ -0.64
Usp4-201ENSMUST00000035237 Rpl36aP83882 106 aaKnown RBP11.07□□□□□ -0.64
Usp4-201ENSMUST00000035237 Abca12E9Q876 2595 aa11.07□□□□□ -0.64
Usp4-201ENSMUST00000035237 Ighv5-9-1A0A0A6YVS4 126 aa11.07□□□□□ -0.64
Usp4-201ENSMUST00000035237 Igkv1-35A0A0G2JDE5 120 aa11.07□□□□□ -0.64
Usp4-201ENSMUST00000035237 Myo9aQ8C170 2542 aa11.07□□□□□ -0.64
Usp4-201ENSMUST00000035237 Igkv4-69A0A0B4J1I6 116 aa11.07□□□□□ -0.64
Usp4-201ENSMUST00000035237 Gm7257D3YX25 99 aa11.07□□□□□ -0.64
Usp4-201ENSMUST00000035237 P01823 113 aa11.07□□□□□ -0.64
Usp4-201ENSMUST00000035237 Rif1Q6PR54 2419 aaKnown RBP11.07□□□□□ -0.64
Usp4-201ENSMUST00000035237 Trbv30A0A0B4J1P1 111 aa11.06□□□□□ -0.64
Usp4-201ENSMUST00000035237 Klk1b4P00757 256 aa11.06□□□□□ -0.64
Usp4-201ENSMUST00000035237 P01786 117 aa11.06□□□□□ -0.64
Usp4-201ENSMUST00000035237 PemtQ61907 199 aa11.06□□□□□ -0.64
Usp4-201ENSMUST00000035237 Ndufa12Q7TMF3 145 aaKnown RBP11.06□□□□□ -0.64
Usp4-201ENSMUST00000035237 AngP21570 145 aa11.05□□□□□ -0.64
Usp4-201ENSMUST00000035237 Taf15Q8BQ46 557 aaKnown RBP11.05□□□□□ -0.64
Usp4-201ENSMUST00000035237 Ighv1-49A0A0A6YWX2 117 aa11.05□□□□□ -0.64
Usp4-201ENSMUST00000035237 MalO09198 153 aa11.05□□□□□ -0.64
Usp4-201ENSMUST00000035237 Defa21Q8C1P2 93 aa11.05□□□□□ -0.64
Usp4-201ENSMUST00000035237 Igkv4-62A0A0G2JDW9 117 aa11.05□□□□□ -0.64
Usp4-201ENSMUST00000035237 Xcl1P47993 114 aa11.05□□□□□ -0.64
Usp4-201ENSMUST00000035237 FshbQ60687 130 aa11.05□□□□□ -0.64
Usp4-201ENSMUST00000035237 B230217C12RikE9Q3Z1 139 aa11.04□□□□□ -0.64
Usp4-201ENSMUST00000035237 Psmb8P28063 276 aa11.04□□□□□ -0.64
Usp4-201ENSMUST00000035237 Hist1h4aP62806 103 aaKnown RBP11.04□□□□□ -0.64
Usp4-201ENSMUST00000035237 Zfhx3Q61329 3726 aa11.04□□□□□ -0.64
Usp4-201ENSMUST00000035237 Igf1P05017 153 aa11.04□□□□□ -0.64
Usp4-201ENSMUST00000035237 4930470P17RikQ9D542 155 aa11.04□□□□□ -0.64
Usp4-201ENSMUST00000035237 Igkv4-78A0A0A6YYE5 119 aa11.04□□□□□ -0.64
Usp4-201ENSMUST00000035237 1700010B08RikQ9DAI7 102 aa11.04□□□□□ -0.64
Usp4-201ENSMUST00000035237 4930432M17RikQ3V0W9 174 aa11.03□□□□□ -0.64
Usp4-201ENSMUST00000035237 Gm10226O88253 85 aa11.03□□□□□ -0.64
Usp4-201ENSMUST00000035237 Pla2g2aP31482 146 aa11.03□□□□□ -0.64
Usp4-201ENSMUST00000035237 Wfdc15aQ8BH89 80 aa11.03□□□□□ -0.64
Usp4-201ENSMUST00000035237 Trav9d-3A0A075B695 113 aa11.02□□□□□ -0.64
Usp4-201ENSMUST00000035237 Trav13-4-dv7A0A075B6C2 110 aa11.02□□□□□ -0.64
Usp4-201ENSMUST00000035237 Ly6gP35461 111 aa11.02□□□□□ -0.64
Usp4-201ENSMUST00000035237 Tomm7Q9D173 55 aa11.02□□□□□ -0.64
Usp4-201ENSMUST00000035237 Cox17P56394 63 aa11.02□□□□□ -0.65
Usp4-201ENSMUST00000035237 Itpr1P11881 2749 aa11.02□□□□□ -0.65
Usp4-201ENSMUST00000035237 Trav11A0A0B4J1J9 114 aa11.02□□□□□ -0.65
Usp4-201ENSMUST00000035237 Trav4-3A0A0B4J1K1 110 aa11.02□□□□□ -0.65
Usp4-201ENSMUST00000035237 ColqO35348 457 aa11.02□□□□□ -0.65
Usp4-201ENSMUST00000035237 TeppQ6IMH0 216 aa11.02□□□□□ -0.65
Usp4-201ENSMUST00000035237 Scgb1b2O35176 93 aa11.01□□□□□ -0.65
Usp4-201ENSMUST00000035237 Zfp951A0A087WRH0 451 aa11.01□□□□□ -0.65
Usp4-201ENSMUST00000035237 Gm9887F6RFI0 207 aa11.01□□□□□ -0.65
Usp4-201ENSMUST00000035237 3110070M22RikQ9DAQ7 118 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 68.9 ms