RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Pcp4P63054 62 aa13.57□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Gm9936Q8C864 160 aa13.57□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Gm10135F6TEE5 83 aa13.57□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Gm8439G3UWA7 96 aa13.57□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Trdv5A0A075B661 115 aa13.56□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Gm3443F7CCV5 94 aa13.56□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Defb47Q30KN1 79 aa13.56□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Gm815Q3UWS2 115 aa13.56□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Abca12E9Q876 2595 aa13.56□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Rnf183Q8QZS5 190 aa13.56□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Igkv4-78A0A0A6YYE5 119 aa13.55□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Trav9n-2A0A0G2JDP3 113 aa13.55□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 P01896 185 aa13.55□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Rmi2Q3UPE3 149 aa13.55□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Zc2hc1bQ9D534 172 aa13.55□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Gm9747Q810H1 104 aa13.54□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Lgals4Q8K419 326 aa13.54□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Dmbt1Q60997 2085 aa13.54□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Igkv4-91A0A075B5L2 119 aa13.54□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 P01738 130 aa13.54□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 4930442H23RikQ9D5G7 103 aa13.54□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Nav3Q80TN7 2359 aa13.54□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 ColqO35348 457 aa13.53□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Rnf152Q8BG47 203 aa13.53□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Ccl21aP84444 133 aa13.53□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Ccl21bP86792 133 aa13.53□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Ccl21cP86793 133 aa13.53□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Gm20730A0A075B5J6 119 aa13.52□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Fgf23Q9EPC2 251 aa13.52□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Arid1bE9Q4N7 2244 aa13.52□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Usp9xP70398 2559 aaKnown RBP13.52□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Gm17472A0A075B683 117 aa13.51□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Trav4-3A0A0B4J1K1 110 aa13.51□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Eif4ebp1Q60876 117 aa13.51□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Smim10l1A0A087WNQ7 89 aa13.51□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Timm17bQ9Z0V7 172 aa13.51□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Trav13d-1A0A075B606 110 aa13.5□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Q99M08 65 aa13.5□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Q9DAQ5 155 aa13.5□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Trav4d-3A0A075B625 110 aa13.49□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Gm11444F6QMA6 170 aa13.49□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Gm5819E9PZ96 154 aa13.48□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Rnase1P00683 149 aa13.48□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Srp14P16254 110 aaKnown RBP13.48□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Avpi1Q9D7H4 142 aa13.48□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 2310009B15RikA0A0A6YWI4 143 aa13.47□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Cks1bP61025 79 aa13.47□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Prelid3aQ8VE85 172 aa13.47□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Glrp1E9Q9S8 174 aa13.47□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Gm5089A1L3C8 106 aa13.46□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Spink10Q8CAC8 162 aa13.46□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 4930415O20RikQ8CDT5 131 aa13.46□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 Tmem101Q91VP7 257 aa13.46□□□□□ -0.25
Shkbp1-201ENSMUST00000003857 H1fxQ80ZM5 188 aa13.45□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 CenpwQ3URR0 86 aa13.44□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 BC067074F6RXI4 2391 aa13.44□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 Scgb1b24B1B0N6 92 aa13.44□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 Gm29423A0A087WRM1 55 aa13.43□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 4930432M17RikQ3V0W9 174 aa13.43□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 Anapc13Q8R034 74 aa13.43□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 Smrp1Q2MH31 260 aa13.42□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 Lypd5Q9D7Z7 256 aa13.42□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 Notch3Q61982 2318 aa13.41□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 P01823 113 aa13.41□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 Chd6A3KFM7 2711 aa13.41□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 Gm10542F6XDR3 90 aa13.4□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 Gm9513B3GLJ6 99 aa13.4□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 Ighv1-61P01749 117 aa13.4□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 Atp5g3P56384 141 aa13.4□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 Defb42Q8BVB5 75 aa13.4□□□□□ -0.26
Shkbp1-201ENSMUST00000003857 Tep1P97499 2629 aa13.39□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Igkv4-79A0A075B5L8 119 aa13.39□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Gm7849D3YX03 116 aa13.39□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Fxyd5P97808 178 aa13.39□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 1700010B08RikQ9DAI7 102 aa13.39□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Usp24B1AY13 2617 aaKnown RBP13.39□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Ankrd17Q99NH0 2603 aaKnown RBP13.39□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Chd9Q8BYH8 2885 aa13.39□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Gm7075D3Z497 112 aa13.39□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 1700020N15RikL7MTX3 112 aa13.39□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Eif4ebp3Q80VV3 101 aa13.39□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 PrlhG3UWC3 86 aa13.38□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Gm26661M0QWV4 156 aa13.38□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 MrapQ9D159 127 aa13.38□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Bahcc1Q3UHR0 2643 aa13.38□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Rpl36aP83882 106 aaKnown RBP13.38□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Ube2wQ8VDW4 151 aa13.38□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Gm11020F6ZGD5 61 aa13.37□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 CirbpP60824 172 aaKnown RBP13.37□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Gm9922Q8C3P1 144 aa13.37□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Shisa2Q8QZV2 295 aa13.37□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 P01729 129 aa13.36□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Morn3Q8C5T4 241 aa13.36□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Muc2Q80Z19 2680 aa13.36□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Trav7-6A0A075B640 112 aa13.36□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Ighv1-62-1A0A075B5U3 116 aa13.35□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Cox6cQ9CPQ1 76 aa13.35□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Tfpi2O35536 230 aa13.35□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Plac8l1Q08EJ0 177 aa13.35□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Cd164l2Q9D6W7 172 aa13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 41.6 ms