RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Ighv1-75A0A075B5Y2 117 aa10.91□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 PrcdQ00LT2 53 aa10.91□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 Trip12G5E870 2025 aaKnown RBP10.91□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 BlcapP62951 87 aa10.91□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 Fam222aQ6PGH4 453 aa10.91□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 Trav13n-2A0A0G2JF93 110 aa10.91□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 P06328 117 aa10.91□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 Zfand3Q497H0 227 aa10.91□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 P01659 112 aa10.91□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 Col5a3Q9JLI2 1739 aa10.91□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 AW146154Q3TPQ7 468 aa10.9□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 Wfdc11A2A5H7 82 aa10.9□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 Gm15557A6PWY0 234 aa10.9□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 Rai1Q61818 1889 aa10.9□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 CrygdP04342 174 aa10.9□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 Cox7b2Q9D2H1 82 aa10.9□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 Med12A2AGH6 2190 aa10.9□□□□□ -0.66
Pcdha8-201ENSMUST00000194038 Klk12B2RVZ0 247 aa10.9□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Trav13-2A0A075B649 110 aa10.89□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 1810032O08RikE9PZV8 113 aa10.89□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Prop1P97458 223 aa10.88□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Gm10542F6XDR3 90 aa10.88□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Cnot1Q6ZQ08 2375 aaKnown RBP10.88□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Trav13-1A0A075B644 110 aa10.88□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Ighv1-61P01749 117 aa10.88□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Prh1P05142 261 aa10.88□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Ighv8-5A0A0A6YY60 119 aa10.88□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Spata25Q9DA57 226 aa10.88□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Col24a1Q30D77 1733 aa10.87□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Vpreb1P13372 142 aa10.87□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 SvipQ3UZP4 77 aa10.87□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Sox16Q62247 57 aa10.87□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Rpl39lQ9CQD0 51 aa10.87□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Trav13-4-dv7A0A075B6C2 110 aa10.87□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Gm5629P06327 117 aa10.87□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Camk2n2Q78WH7 79 aa10.86□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 BtcQ05928 177 aa10.86□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Anapc1P53995 1944 aaKnown RBP10.86□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Ighv8-12A0A0G2JDE1 119 aa10.86□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 P18527 97 aa10.85□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Igf2rQ07113 2483 aaKnown RBP10.85□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 B230359F08RikA0A0B4J1K3 109 aa10.85□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Defb12Q8K4N3 78 aa10.85□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Naa38Q9D2U5 125 aa10.85□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Wdr38Q9D994 303 aa10.85□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Spink4O35679 86 aa10.85□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Gm37389A0A0A6YW05 95 aa10.85□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Timm17bQ9Z0V7 172 aa10.85□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Igkv1-88A0A140T8N1 120 aa10.84□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 PtprsB0V2N1 1907 aa10.84□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Znf239P24399 201 aa10.84□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Cox8cA6H666 72 aa10.84□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Nsun4C4P6S0 806 aaKnown RBP10.84□□□□□ -0.67
Pcdha8-201ENSMUST00000194038 Ighv1-82A0A0G2JEU7 117 aa10.83□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Gm1968Q3T9I3 115 aa10.83□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Rnf185Q91YT2 192 aa10.83□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Arfgef3Q3UGY8 2170 aa10.83□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Ighv1-85A0A075B5Y6 117 aa10.83□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Q9CX25 107 aa10.83□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Gm17577J3QNF7 156 aa10.83□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Ncoa6Q9JL19 2067 aa10.83□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 P84751 237 aa10.82□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Dopey2Q3UHQ6 2295 aa10.82□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Plxnb3Q9QY40 1902 aa10.82□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Zc2hc1bQ9D534 172 aa10.82□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Igkv8-18A0A0B4J1J3 123 aa10.82□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Lypd6Q8BPP5 171 aa10.82□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Vpreb3D3Z6J4 130 aa10.82□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Tcl1b3P56842 122 aa10.82□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Ppp1r32Q148A4 427 aa10.82□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 B9d2Q3UK10 175 aa10.82□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 FcorP0DJI6 106 aa10.82□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 CadB2RQC6 2225 aa10.81□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 P01747 120 aa10.81□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Map6d1Q14BB9 191 aa10.81□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 P01745 121 aa10.81□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Dennd4cA6H8H2 1906 aa10.8□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Pcdh15Q99PJ1 1943 aa10.8□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Klk9Q32M27 251 aa10.8□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Wipf1Q8K1I7 493 aa10.8□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Klk5Q9D140 293 aa10.8□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Col8a2P25318 699 aa10.8□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Crybg1A0A0G2JG52 2065 aa10.8□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Gm3618D3Z4P5 127 aa10.79□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 AvpP35455 168 aa10.79□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Ighv2-6-8A0A0A6YWY9 116 aa10.79□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Ube2d4D3YUH6 135 aa10.79□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Smim1P0C8K7 78 aa10.79□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Trav9n-4A0A075B631 113 aa10.79□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 4930470P17RikQ9D542 155 aa10.79□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Prpf8Q99PV0 2335 aaKnown RBP10.79□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 CenpwQ3URR0 86 aa10.78□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Tfpi2O35536 230 aa10.78□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 C1qcQ02105 246 aa10.78□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Prr12E9PYL2 2035 aaKnown RBP10.78□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Serp2Q6TAW2 65 aa10.78□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Usf3B2RUQ2 2221 aa10.78□□□□□ -0.68
Pcdha8-201ENSMUST00000194038 Ly6hQ9WUC3 139 aa10.77□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Gphb5Q812B2 130 aa10.77□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 EnhoQ8K1D8 76 aa10.77□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 71.2 ms