RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Timm17aQ9Z0V8 171 aa11.35□□□□□ -0.59
Vcan-201ENSMUST00000109543 Unc79Q0KK59 2596 aa11.35□□□□□ -0.59
Vcan-201ENSMUST00000109543 Mast4Q811L6 2618 aa11.35□□□□□ -0.59
Vcan-201ENSMUST00000109543 OdaphJ3QNT8 126 aa11.35□□□□□ -0.59
Vcan-201ENSMUST00000109543 Gm42674D3YUT9 64 aa11.34□□□□□ -0.59
Vcan-201ENSMUST00000109543 Vamp8O70404 101 aa11.34□□□□□ -0.59
Vcan-201ENSMUST00000109543 Gm10509O88255 85 aa11.34□□□□□ -0.59
Vcan-201ENSMUST00000109543 Higd1aQ9JLR9 95 aa11.34□□□□□ -0.59
Vcan-201ENSMUST00000109543 Gm45753A0A1C7CYU8 86 aa11.34□□□□□ -0.59
Vcan-201ENSMUST00000109543 Foxi2Q3I5G5 311 aa11.34□□□□□ -0.59
Vcan-201ENSMUST00000109543 Gm21370Q3T9V6 190 aa11.34□□□□□ -0.59
Vcan-201ENSMUST00000109543 Rnf152Q8BG47 203 aa11.34□□□□□ -0.59
Vcan-201ENSMUST00000109543 Mtatp8P03930 67 aa11.33□□□□□ -0.6
Vcan-201ENSMUST00000109543 Gm815Q3UWS2 115 aa11.33□□□□□ -0.6
Vcan-201ENSMUST00000109543 Gm10295Q8CCF3 114 aa11.33□□□□□ -0.6
Vcan-201ENSMUST00000109543 Trav9n-2A0A0G2JDP3 113 aa11.32□□□□□ -0.6
Vcan-201ENSMUST00000109543 Gm45213A0A0U1RNZ6 101 aa11.32□□□□□ -0.6
Vcan-201ENSMUST00000109543 Nat8b-psE0CYC6 232 aa11.32□□□□□ -0.6
Vcan-201ENSMUST00000109543 Defb45Q3V490 66 aa11.32□□□□□ -0.6
Vcan-201ENSMUST00000109543 Rif1Q6PR54 2419 aaKnown RBP11.31□□□□□ -0.6
Vcan-201ENSMUST00000109543 Gm26602M0QWA4 95 aa11.31□□□□□ -0.6
Vcan-201ENSMUST00000109543 SrarpQ3ULG3 163 aa11.31□□□□□ -0.6
Vcan-201ENSMUST00000109543 Gm14137Q8CE97 175 aa11.31□□□□□ -0.6
Vcan-201ENSMUST00000109543 Iglc1A0A0G2JE99 106 aa11.31□□□□□ -0.6
Vcan-201ENSMUST00000109543 Gm7075D3Z497 112 aa11.31□□□□□ -0.6
Vcan-201ENSMUST00000109543 P01738 130 aa11.31□□□□□ -0.6
Vcan-201ENSMUST00000109543 P01843 105 aa11.31□□□□□ -0.6
Vcan-201ENSMUST00000109543 Cox7cP17665 63 aa11.31□□□□□ -0.6
Vcan-201ENSMUST00000109543 Trav7d-3Q5R1I1 112 aa11.31□□□□□ -0.6
Vcan-201ENSMUST00000109543 Ankrd39Q9D2X0 183 aa11.31□□□□□ -0.6
Vcan-201ENSMUST00000109543 Q9D8Q6 235 aa11.31□□□□□ -0.6
Vcan-201ENSMUST00000109543 Tmem263Q9DAM7 115 aa11.31□□□□□ -0.6
Vcan-201ENSMUST00000109543 Hsbp1l1B2RXB2 72 aa11.3□□□□□ -0.6
Vcan-201ENSMUST00000109543 Rbx1P62878 108 aa11.3□□□□□ -0.6
Vcan-201ENSMUST00000109543 Cfc1P97766 202 aa11.3□□□□□ -0.6
Vcan-201ENSMUST00000109543 Trav7-2Q5R1I3 112 aa11.3□□□□□ -0.6
Vcan-201ENSMUST00000109543 Ighv1-5A0A0A6YWG2 117 aa11.3□□□□□ -0.6
Vcan-201ENSMUST00000109543 Cox17P56394 63 aa11.3□□□□□ -0.6
Vcan-201ENSMUST00000109543 Fam19a4Q7TPG5 135 aa11.3□□□□□ -0.6
Vcan-201ENSMUST00000109543 Tmem97Q8VD00 176 aa11.3□□□□□ -0.6
Vcan-201ENSMUST00000109543 Xirp2Q4U4S6 3784 aa11.29□□□□□ -0.6
Vcan-201ENSMUST00000109543 PerpQ9JK95 193 aa11.29□□□□□ -0.6
Vcan-201ENSMUST00000109543 TrrapQ80YV3 2565 aaKnown RBP11.29□□□□□ -0.6
Vcan-201ENSMUST00000109543 Tenm3Q9WTS6 2715 aa11.29□□□□□ -0.6
Vcan-201ENSMUST00000109543 SbpP15501 199 aa11.29□□□□□ -0.6
Vcan-201ENSMUST00000109543 Atp5lQ9CPQ8 103 aa11.29□□□□□ -0.6
Vcan-201ENSMUST00000109543 Atxn7l1Q9CZ05 146 aa11.29□□□□□ -0.6
Vcan-201ENSMUST00000109543 Ifitm1Q9D103 106 aa11.29□□□□□ -0.6
Vcan-201ENSMUST00000109543 Gata1P17679 413 aa11.28□□□□□ -0.6
Vcan-201ENSMUST00000109543 Cd99Q8VCN6 175 aa11.28□□□□□ -0.6
Vcan-201ENSMUST00000109543 Fgfbp3Q1HCM0 245 aa11.27□□□□□ -0.61
Vcan-201ENSMUST00000109543 Rbmxl2Q9DAE2 385 aaKnown RBP11.27□□□□□ -0.61
Vcan-201ENSMUST00000109543 Dpm2Q9Z324 84 aa11.27□□□□□ -0.61
Vcan-201ENSMUST00000109543 PrlhG3UWC3 86 aa11.26□□□□□ -0.61
Vcan-201ENSMUST00000109543 Cysltr1Q99JA4 352 aa11.26□□□□□ -0.61
Vcan-201ENSMUST00000109543 LeprotO89013 131 aa11.26□□□□□ -0.61
Vcan-201ENSMUST00000109543 S100a8P27005 89 aa11.26□□□□□ -0.61
Vcan-201ENSMUST00000109543 Gm10300Q8C8P7 189 aa11.26□□□□□ -0.61
Vcan-201ENSMUST00000109543 Hivep2Q3UHF7 2430 aa11.25□□□□□ -0.61
Vcan-201ENSMUST00000109543 Trav4n-4A0A075B615 110 aa11.25□□□□□ -0.61
Vcan-201ENSMUST00000109543 Esp24A8R0V6 68 aa11.25□□□□□ -0.61
Vcan-201ENSMUST00000109543 Mpv17l2Q8VIK2 200 aa11.25□□□□□ -0.61
Vcan-201ENSMUST00000109543 Q99M08 65 aa11.25□□□□□ -0.61
Vcan-201ENSMUST00000109543 Lypd5Q9D7Z7 256 aa11.25□□□□□ -0.61
Vcan-201ENSMUST00000109543 Sap30O88574 220 aa11.25□□□□□ -0.61
Vcan-201ENSMUST00000109543 PolP10400 120 aa11.25□□□□□ -0.61
Vcan-201ENSMUST00000109543 Cd164l2Q9D6W7 172 aa11.25□□□□□ -0.61
Vcan-201ENSMUST00000109543 Triap1Q9D8Z2 76 aa11.25□□□□□ -0.61
Vcan-201ENSMUST00000109543 Chd9Q8BYH8 2885 aa11.24□□□□□ -0.61
Vcan-201ENSMUST00000109543 Igkv4-91A0A075B5L2 119 aa11.24□□□□□ -0.61
Vcan-201ENSMUST00000109543 Gm7849D3YX03 116 aa11.24□□□□□ -0.61
Vcan-201ENSMUST00000109543 Pxt1Q8K459 51 aa11.24□□□□□ -0.61
Vcan-201ENSMUST00000109543 Myo9aQ8C170 2542 aa11.24□□□□□ -0.61
Vcan-201ENSMUST00000109543 Gm9242J3QNY1 357 aa11.24□□□□□ -0.61
Vcan-201ENSMUST00000109543 March3Q8BRX9 218 aa11.24□□□□□ -0.61
Vcan-201ENSMUST00000109543 Mrpl35Q9CQL6 188 aa11.24□□□□□ -0.61
Vcan-201ENSMUST00000109543 HilpdaQ9JLS0 64 aa11.24□□□□□ -0.61
Vcan-201ENSMUST00000109543 Defb42Q8BVB5 75 aa11.23□□□□□ -0.61
Vcan-201ENSMUST00000109543 Ighv2-6-8A0A0A6YWY9 116 aa11.23□□□□□ -0.61
Vcan-201ENSMUST00000109543 Gm26920S4R2A5 56 aa11.23□□□□□ -0.61
Vcan-201ENSMUST00000109543 P01741 114 aa11.22□□□□□ -0.61
Vcan-201ENSMUST00000109543 Gm9922Q8C3P1 144 aa11.22□□□□□ -0.61
Vcan-201ENSMUST00000109543 Trdv5A0A075B661 115 aa11.21□□□□□ -0.61
Vcan-201ENSMUST00000109543 Crip2Q9DCT8 208 aaKnown RBP11.21□□□□□ -0.61
Vcan-201ENSMUST00000109543 Dmrt3Q80WT2 476 aa11.21□□□□□ -0.62
Vcan-201ENSMUST00000109543 Srsf9Q9D0B0 222 aaKnown RBP11.21□□□□□ -0.62
Vcan-201ENSMUST00000109543 Pgpep1Q9ESW8 209 aa11.21□□□□□ -0.62
Vcan-201ENSMUST00000109543 MtorQ9JLN9 2549 aa11.21□□□□□ -0.62
Vcan-201ENSMUST00000109543 Tcrg-C1A0A075B5Z0 172 aa11.2□□□□□ -0.62
Vcan-201ENSMUST00000109543 Smr3aQ61900 147 aa11.2□□□□□ -0.62
Vcan-201ENSMUST00000109543 Phlda3Q9WV95 125 aa11.2□□□□□ -0.62
Vcan-201ENSMUST00000109543 Igkv4-78A0A0A6YYE5 119 aa11.2□□□□□ -0.62
Vcan-201ENSMUST00000109543 Erdr1J3QMM0 206 aa11.2□□□□□ -0.62
Vcan-201ENSMUST00000109543 Spink13Q3UTS8 97 aa11.2□□□□□ -0.62
Vcan-201ENSMUST00000109543 Gemin7Q9CWY4 129 aa11.2□□□□□ -0.62
Vcan-201ENSMUST00000109543 Gm35549A0A0N4SUS7 141 aa11.19□□□□□ -0.62
Vcan-201ENSMUST00000109543 Esp4A8R0T8 117 aa11.19□□□□□ -0.62
Vcan-201ENSMUST00000109543 Ube2d1P61080 147 aaKnown RBP11.19□□□□□ -0.62
Vcan-201ENSMUST00000109543 Gm21748Q3UE70 102 aa11.19□□□□□ -0.62
Vcan-201ENSMUST00000109543 Cfap126Q6P8X9 189 aa11.19□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms