RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Cox7cP17665 63 aa12.67□□□□□ -0.38
Usp47-201ENSMUST00000106653 Ncoa6Q9JL19 2067 aa12.67□□□□□ -0.38
Usp47-201ENSMUST00000106653 Ube2bP63147 152 aa12.67□□□□□ -0.38
Usp47-201ENSMUST00000106653 Fam240bJ3QMB3 78 aa12.67□□□□□ -0.38
Usp47-201ENSMUST00000106653 Ighv1-75A0A075B5Y2 117 aa12.66□□□□□ -0.38
Usp47-201ENSMUST00000106653 Trav4d-3A0A075B625 110 aa12.66□□□□□ -0.38
Usp47-201ENSMUST00000106653 Trav4-3A0A0B4J1K1 110 aa12.66□□□□□ -0.38
Usp47-201ENSMUST00000106653 Ighv1-82A0A0G2JEU7 117 aa12.66□□□□□ -0.38
Usp47-201ENSMUST00000106653 Trav13n-1A0A0G2JEU8 110 aa12.66□□□□□ -0.38
Usp47-201ENSMUST00000106653 Trav13d-1A0A075B606 110 aa12.66□□□□□ -0.38
Usp47-201ENSMUST00000106653 Gm10295Q8CCF3 114 aa12.66□□□□□ -0.38
Usp47-201ENSMUST00000106653 Inafm2A0A1L1STD6 152 aa12.65□□□□□ -0.38
Usp47-201ENSMUST00000106653 Edn2P22389 175 aa12.65□□□□□ -0.38
Usp47-201ENSMUST00000106653 Ighv1-62-2A0A0A6YXZ4 119 aa12.65□□□□□ -0.38
Usp47-201ENSMUST00000106653 Gm17359A0A0G2JEB7 487 aa12.65□□□□□ -0.38
Usp47-201ENSMUST00000106653 Gm10226O88253 85 aa12.65□□□□□ -0.38
Usp47-201ENSMUST00000106653 Klk5Q9D140 293 aa12.65□□□□□ -0.38
Usp47-201ENSMUST00000106653 Snai3Q9QY31 287 aa12.65□□□□□ -0.38
Usp47-201ENSMUST00000106653 Plscr4P58196 326 aa12.65□□□□□ -0.38
Usp47-201ENSMUST00000106653 Dopey2Q3UHQ6 2295 aa12.64□□□□□ -0.39
Usp47-201ENSMUST00000106653 Tmem223Q9CQE2 199 aaKnown RBP12.64□□□□□ -0.39
Usp47-201ENSMUST00000106653 Fxyd5P97808 178 aa12.64□□□□□ -0.39
Usp47-201ENSMUST00000106653 Gm10518F6UQQ9 182 aa12.63□□□□□ -0.39
Usp47-201ENSMUST00000106653 Iglc1A0A0G2JE99 106 aa12.63□□□□□ -0.39
Usp47-201ENSMUST00000106653 P01843 105 aa12.63□□□□□ -0.39
Usp47-201ENSMUST00000106653 9430069I07RikQ9CX21 111 aa12.62□□□□□ -0.39
Usp47-201ENSMUST00000106653 Arhgef17Q80U35 2057 aa12.62□□□□□ -0.39
Usp47-201ENSMUST00000106653 Ighv1-11A0A0A6YWI9 117 aa12.62□□□□□ -0.39
Usp47-201ENSMUST00000106653 Cox7b2Q9D2H1 82 aa12.62□□□□□ -0.39
Usp47-201ENSMUST00000106653 Ighv2-3A0A075B696 115 aa12.62□□□□□ -0.39
Usp47-201ENSMUST00000106653 Trav13-4-dv7A0A075B6C2 110 aa12.62□□□□□ -0.39
Usp47-201ENSMUST00000106653 Igkv1-122A0A140T8M9 119 aa12.62□□□□□ -0.39
Usp47-201ENSMUST00000106653 Reg3bP35230 175 aa12.62□□□□□ -0.39
Usp47-201ENSMUST00000106653 Gm42674D3YUT9 64 aa12.61□□□□□ -0.39
Usp47-201ENSMUST00000106653 Hrct1Q9D6B9 109 aa12.61□□□□□ -0.39
Usp47-201ENSMUST00000106653 Gm10542F6XDR3 90 aa12.61□□□□□ -0.39
Usp47-201ENSMUST00000106653 Znf575Q3TXZ1 239 aa12.6□□□□□ -0.39
Usp47-201ENSMUST00000106653 Pcp4P63054 62 aa12.6□□□□□ -0.39
Usp47-201ENSMUST00000106653 Gm12689Q8BQU9 117 aa12.6□□□□□ -0.39
Usp47-201ENSMUST00000106653 Eml6Q5SQM0 1958 aa12.6□□□□□ -0.39
Usp47-201ENSMUST00000106653 Ly6c2P0CW03 131 aa12.59□□□□□ -0.39
Usp47-201ENSMUST00000106653 Camk2n2Q78WH7 79 aa12.59□□□□□ -0.39
Usp47-201ENSMUST00000106653 PkigO70139 76 aa12.59□□□□□ -0.39
Usp47-201ENSMUST00000106653 Rbmy1bQ60990 380 aa12.59□□□□□ -0.39
Usp47-201ENSMUST00000106653 Tns1E9Q0S6 1888 aaKnown RBP12.59□□□□□ -0.39
Usp47-201ENSMUST00000106653 Znf239P24399 201 aa12.58□□□□□ -0.39
Usp47-201ENSMUST00000106653 Trav13-2A0A075B649 110 aa12.58□□□□□ -0.4
Usp47-201ENSMUST00000106653 Sh2d1aO88890 126 aa12.58□□□□□ -0.4
Usp47-201ENSMUST00000106653 A130051J06RikQ8CAU1 227 aa12.58□□□□□ -0.4
Usp47-201ENSMUST00000106653 Ebi3O35228 228 aa12.57□□□□□ -0.4
Usp47-201ENSMUST00000106653 Med13lQ6JPI3 2207 aa12.57□□□□□ -0.4
Usp47-201ENSMUST00000106653 Ighv2-6A0A075B6A7 116 aa12.57□□□□□ -0.4
Usp47-201ENSMUST00000106653 P0C913 63 aa12.57□□□□□ -0.4
Usp47-201ENSMUST00000106653 Ighv1-85A0A075B5Y6 117 aa12.57□□□□□ -0.4
Usp47-201ENSMUST00000106653 B230307C23RikQ8BLB2 64 aa12.57□□□□□ -0.4
Usp47-201ENSMUST00000106653 Wnk1P83741 2377 aa12.56□□□□□ -0.4
Usp47-201ENSMUST00000106653 Trav9n-4A0A075B631 113 aa12.56□□□□□ -0.4
Usp47-201ENSMUST00000106653 Gm17472A0A075B683 117 aa12.56□□□□□ -0.4
Usp47-201ENSMUST00000106653 BB014433Q8C5R5 389 aa12.56□□□□□ -0.4
Usp47-201ENSMUST00000106653 Spry2Q9QXV8 315 aa12.56□□□□□ -0.4
Usp47-201ENSMUST00000106653 Defa27F2Z403 93 aa12.56□□□□□ -0.4
Usp47-201ENSMUST00000106653 Wipf1Q8K1I7 493 aa12.56□□□□□ -0.4
Usp47-201ENSMUST00000106653 Igkv8-26A0A075B5N5 123 aa12.56□□□□□ -0.4
Usp47-201ENSMUST00000106653 B230359F08RikA0A0B4J1K3 109 aa12.56□□□□□ -0.4
Usp47-201ENSMUST00000106653 MifP34884 115 aaKnown RBP12.56□□□□□ -0.4
Usp47-201ENSMUST00000106653 1700010B08RikQ9DAI7 102 aa12.56□□□□□ -0.4
Usp47-201ENSMUST00000106653 Adamts20P59511 1906 aa12.55□□□□□ -0.4
Usp47-201ENSMUST00000106653 Ociad2Q9D8W7 154 aa12.55□□□□□ -0.4
Usp47-201ENSMUST00000106653 Sigmar1O55242 223 aa12.55□□□□□ -0.4
Usp47-201ENSMUST00000106653 Eif4ebp1Q60876 117 aa12.55□□□□□ -0.4
Usp47-201ENSMUST00000106653 Pet100P0DJE0 76 aa12.54□□□□□ -0.4
Usp47-201ENSMUST00000106653 Igkv1-88A0A140T8N1 120 aa12.54□□□□□ -0.4
Usp47-201ENSMUST00000106653 1700012A03RikQ9DAF1 130 aa12.54□□□□□ -0.4
Usp47-201ENSMUST00000106653 PlaurP35456 327 aa12.54□□□□□ -0.4
Usp47-201ENSMUST00000106653 SbsponQ3UPR9 264 aa12.54□□□□□ -0.4
Usp47-201ENSMUST00000106653 Dopey1Q8BL99 2399 aa12.54□□□□□ -0.4
Usp47-201ENSMUST00000106653 Trav13-1A0A075B644 110 aa12.54□□□□□ -0.4
Usp47-201ENSMUST00000106653 Defa21Q8C1P2 93 aa12.53□□□□□ -0.4
Usp47-201ENSMUST00000106653 Lypd6Q8BPP5 171 aa12.53□□□□□ -0.4
Usp47-201ENSMUST00000106653 Gm10735Q3US96 136 aa12.53□□□□□ -0.4
Usp47-201ENSMUST00000106653 Q9D8Q6 235 aa12.53□□□□□ -0.4
Usp47-201ENSMUST00000106653 Spink10Q8CAC8 162 aa12.52□□□□□ -0.4
Usp47-201ENSMUST00000106653 Ighv1-63A0A075B5X2 117 aa12.52□□□□□ -0.41
Usp47-201ENSMUST00000106653 Gm10251J3QPM5 127 aa12.52□□□□□ -0.41
Usp47-201ENSMUST00000106653 Gm2916Q9D9B9 127 aa12.52□□□□□ -0.41
Usp47-201ENSMUST00000106653 E130114P18RikF6S0S7 154 aa12.51□□□□□ -0.41
Usp47-201ENSMUST00000106653 1520401A03RikA0A0J9YVH6 598 aa12.51□□□□□ -0.41
Usp47-201ENSMUST00000106653 Ypel4Q65Z93 127 aa12.51□□□□□ -0.41
Usp47-201ENSMUST00000106653 Igkv4-58A0A0G2JGI6 119 aa12.5□□□□□ -0.41
Usp47-201ENSMUST00000106653 Ovol3D3YYM0 189 aa12.5□□□□□ -0.41
Usp47-201ENSMUST00000106653 Cox11Q6P8I6 275 aa12.5□□□□□ -0.41
Usp47-201ENSMUST00000106653 Gm17577J3QNF7 156 aa12.5□□□□□ -0.41
Usp47-201ENSMUST00000106653 Trav7-6A0A075B640 112 aa12.5□□□□□ -0.41
Usp47-201ENSMUST00000106653 B9d2Q3UK10 175 aa12.5□□□□□ -0.41
Usp47-201ENSMUST00000106653 AngP21570 145 aa12.5□□□□□ -0.41
Usp47-201ENSMUST00000106653 Rnf185Q91YT2 192 aa12.5□□□□□ -0.41
Usp47-201ENSMUST00000106653 Gm5629P06327 117 aa12.49□□□□□ -0.41
Usp47-201ENSMUST00000106653 Psmb8P28063 276 aa12.49□□□□□ -0.41
Usp47-201ENSMUST00000106653 DscamQ9ERC8 2013 aa12.49□□□□□ -0.41
Usp47-201ENSMUST00000106653 Trav13n-2A0A0G2JF93 110 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms