RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Gm45785A0A1B0GT05 94 aa11.86□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 Morn5Q9DAI9 170 aa11.86□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 Cryba4Q9JJV0 196 aa11.86□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 Phlda3Q9WV95 125 aa11.86□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 Gm28269A0A087WSG3 125 aa11.86□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 MsmbO08540 113 aa11.86□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 Ly86O88188 162 aa11.86□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 March3Q8BRX9 218 aa11.86□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 Mrpl35Q9CQL6 188 aa11.86□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 CckP09240 115 aa11.85□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 Cox17P56394 63 aa11.85□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 MrapQ9D159 127 aa11.85□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 3110070M22RikQ9DAQ7 118 aa11.85□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 Ighv1-58A0A075B5W9 117 aa11.84□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 4930442H23RikQ9D5G7 103 aa11.84□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 HilpdaQ9JLS0 64 aa11.84□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 Cep192E9Q4Y4 2514 aaKnown RBP11.84□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 Cspg4Q8VHY0 2327 aa11.84□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 Dido1Q8C9B9 2256 aaKnown RBP11.84□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 P01753 117 aa11.83□□□□□ -0.51
Ttc39b-202ENSMUST00000048274 Ighv2-7A0A075B5Q8 116 aa11.83□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 C920008G01RikA0A0B4J1N1 112 aa11.83□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Gm10553J3QPF1 123 aa11.83□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Gm28044L7N1X0 119 aa11.83□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Psmb8P28063 276 aa11.83□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Fgfbp3Q1HCM0 245 aa11.83□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Cfap126Q6P8X9 189 aa11.83□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Gm9936Q8C864 160 aa11.83□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 BC106179Q8C9L1 186 aa11.83□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Col7a1Q63870 2944 aa11.82□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Trbv17A0A140T8P8 114 aa11.82□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Ly6gP35461 111 aa11.82□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Lrcol1Q3URS3 161 aa11.82□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Igkv4-68A0A0B4J1I7 117 aa11.81□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Rpl32-psP17932 135 aa11.81□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Rpl13aP19253 203 aaKnown RBP11.81□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Fam19a4Q7TPG5 135 aa11.81□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Gm10322F7D7I4 111 aa11.81□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 A930009A15RikG3UYI6 118 aa11.81□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Gm10509O88255 85 aa11.81□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Ighv1-72P01751 139 aa11.81□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Srp14P16254 110 aaKnown RBP11.81□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Lelp1Q9DAE3 120 aa11.81□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Smg1Q8BKX6 3658 aaKnown RBP11.8□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 1810032O08RikE9PZV8 113 aa11.8□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Prr3Q811B5 190 aaKnown RBP11.8□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Mfap4Q9D1H9 257 aa11.8□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Lect2O88803 151 aa11.79□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 P04219 140 aa11.79□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 A530064D06RikQ8BNV8 229 aa11.79□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Lgals4Q8K419 326 aa11.79□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Ube2e2Q91W82 201 aa11.79□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Dynlrb2Q9DAJ5 96 aa11.79□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Trav4-3A0A0B4J1K1 110 aa11.79□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Gm10490F6VBM2 120 aa11.79□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 H1fxQ80ZM5 188 aa11.79□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Rnf152Q8BG47 203 aa11.79□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Tnfrsf23Q9ER63 176 aa11.79□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Ttc28Q80XJ3 2450 aa11.78□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Trav4d-3A0A075B625 110 aa11.78□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Cks1bP61025 79 aa11.78□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Ifitm10Q8BR26 201 aa11.78□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Rab37Q9JKM7 223 aa11.78□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Timm17bQ9Z0V7 172 aa11.78□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Sptbn1Q62261 2363 aaKnown RBP11.77□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Trav9-2A0A075B647 113 aa11.77□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Trav9-4A0A0B4J1K2 113 aa11.77□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Gm35549A0A0N4SUS7 141 aa11.77□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 P84751 237 aa11.77□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Tmem213Q08EA8 116 aa11.77□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Eif4ebp1Q60876 117 aa11.77□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 Synj2bpQ9D6K5 145 aa11.77□□□□□ -0.52
Ttc39b-202ENSMUST00000048274 SonQ9QX47 2444 aaKnown RBP11.77□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Ighv1-11A0A0A6YWI9 117 aa11.76□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Gm9887F6RFI0 207 aa11.76□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Fhl2O70433 279 aa11.76□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Gata1P17679 413 aa11.76□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 NrgnP60761 78 aa11.76□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Gm21994F6T2D2 329 aa11.76□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 P01811 117 aa11.76□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Smrp1Q2MH31 260 aa11.76□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Gm21748Q3UE70 102 aa11.76□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Sptan1P16546 2472 aaKnown RBP11.75□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Myo18bE9PV66 2605 aa11.75□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Scgb1b24B1B0N6 92 aa11.75□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Srsf12Q8C8K3 266 aa11.75□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Ccl24Q9JKC0 119 aa11.75□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Med13lQ6JPI3 2207 aa11.75□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 B230217C12RikE9Q3Z1 139 aa11.74□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Trav7d-3Q5R1I1 112 aa11.74□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Crip2Q9DCT8 208 aaKnown RBP11.74□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Gm10135F6TEE5 83 aa11.73□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Ifi27l2aQ8R412 90 aa11.73□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Abca12E9Q876 2595 aa11.73□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Fam208bQ5DTT3 2382 aa11.72□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Spag11Q8K4N2 71 aa11.72□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Chd6A3KFM7 2711 aa11.72□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 OdaphJ3QNT8 126 aa11.72□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Samd5Q3V1H9 173 aa11.72□□□□□ -0.53
Ttc39b-202ENSMUST00000048274 Ndufs7Q9DC70 224 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 100.7 ms