RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Klf13Q9JJZ6 289 aa13.14□□□□□ -0.31
Scn1b-203ENSMUST00000211945 PdfS4R2K0 231 aa13.14□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Gm12169F2Z474 250 aa13.13□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Fgfbp3Q1HCM0 245 aa13.13□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Gm11733Q8BQP1 125 aa13.13□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Borcs7Q9CRC6 105 aa13.13□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Gm10322F7D7I4 111 aa13.13□□□□□ -0.31
Scn1b-203ENSMUST00000211945 S100a10P08207 97 aa13.13□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Gm904Q3V2L5 102 aa13.13□□□□□ -0.31
Scn1b-203ENSMUST00000211945 A530064D06RikQ8BNV8 229 aa13.13□□□□□ -0.31
Scn1b-203ENSMUST00000211945 TgO08710 2766 aa13.12□□□□□ -0.31
Scn1b-203ENSMUST00000211945 P06329 120 aa13.12□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Q24JP4 165 aa13.12□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Ndufs7Q9DC70 224 aa13.12□□□□□ -0.31
Scn1b-203ENSMUST00000211945 NpwA0A1L1STR8 176 aa13.11□□□□□ -0.31
Scn1b-203ENSMUST00000211945 P06334 169 aa13.11□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Ly6gP35461 111 aa13.11□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Trav14-3A0A075B607 120 aa13.1□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Khdc1cQ4KL78 166 aa13.1□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Gm9944Q8C559 102 aa13.1□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Q9D131 166 aa13.1□□□□□ -0.31
Scn1b-203ENSMUST00000211945 MNCb-2875Q9DCB3 74 aa13.1□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Dnah1E9Q8T7 4250 aa13.09□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Igkv4-91A0A075B5L2 119 aa13.09□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Spink4O35679 86 aa13.09□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Smim7Q5RKS2 75 aa13.09□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Olfr984Q8VFN1 314 aa13.09□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Ube2cQ9D1C1 179 aa13.09□□□□□ -0.31
Scn1b-203ENSMUST00000211945 PmvkQ9D1G2 192 aa13.09□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Gm20379A0A087WR34 119 aa13.08□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Esp38A8R0X1 80 aa13.08□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Gm20517G3UVU6 152 aa13.08□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Tmem140Q8BGY5 185 aa13.08□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Tctex1d2Q9CQ66 144 aa13.08□□□□□ -0.31
Scn1b-203ENSMUST00000211945 Emp2O88662 172 aa13.08□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Gm6040Q4QY32 63 aa13.08□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Gng7Q61016 68 aa13.08□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Ighv1-85A0A075B5Y6 117 aa13.07□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Trav12d-3A0A075B6A4 115 aa13.07□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Pradc1Q9D9N8 188 aa13.07□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Nudt3Q9JI46 168 aa13.07□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Gm5629P06327 117 aa13.06□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Dmrt3Q80WT2 476 aa13.06□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Ammecr1lQ8JZZ6 310 aa13.06□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Fras1Q80T14 4010 aa13.05□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Ighv8-5A0A0A6YY60 119 aa13.05□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Zfp867E9Q2M4 473 aa13.05□□□□□ -0.32
Scn1b-203ENSMUST00000211945 P01791 123 aa13.05□□□□□ -0.32
Scn1b-203ENSMUST00000211945 LalbaP29752 143 aa13.05□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Q3UUX7 111 aa13.05□□□□□ -0.32
Scn1b-203ENSMUST00000211945 RfxapQ8VCG9 231 aa13.05□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Ormdl3Q9CPZ6 153 aa13.05□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Trav9d-3A0A075B695 113 aa13.04□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Gata1P17679 413 aa13.04□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Gm21370Q3T9V6 190 aa13.04□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Rab5aQ9CQD1 215 aa13.04□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Urm1Q9D2P4 101 aa13.04□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Trav13-1A0A075B644 110 aa13.03□□□□□ -0.32
Scn1b-203ENSMUST00000211945 SriQ6P069 198 aa13.03□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Gm9936Q8C864 160 aa13.03□□□□□ -0.32
Scn1b-203ENSMUST00000211945 AamdcQ8R0P4 122 aa13.03□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Tmem101Q91VP7 257 aa13.03□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Snai3Q9QY31 287 aa13.03□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Dnah7bL7N1Y0 4068 aa13.03□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Gm9918Q8BUR5 174 aa13.03□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Bles03Q8VD62 251 aa13.03□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Tcf24V9GWT9 166 aa13.03□□□□□ -0.32
Scn1b-203ENSMUST00000211945 PlecQ9QXS1 4691 aaKnown RBP13.02□□□□□ -0.32
Scn1b-203ENSMUST00000211945 Ube2d3P61079 147 aa13.02□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Ube2d2P62838 147 aa13.02□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Rpl36aP83882 106 aaKnown RBP13.02□□□□□ -0.33
Scn1b-203ENSMUST00000211945 A930004D18RikQ8C8W7 157 aa13.02□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Gm16223Q8CBM3 117 aa13.02□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Polr2kQ63871 58 aa13.01□□□□□ -0.33
Scn1b-203ENSMUST00000211945 AplnQ9R0R4 77 aa13.01□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Ighv8-13A0A075B5Y0 101 aa13□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Gm16442D3YZG3 307 aa13□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Scgb2a2J3KMP9 96 aa13□□□□□ -0.33
Scn1b-203ENSMUST00000211945 CebpgP53568 150 aa13□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Mllt11P97783 90 aa13□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Mapk1ip1Q9D7G9 263 aa13□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Ighv8-11A0A075B5X4 119 aa12.99□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Trav6n-6A0A075B6B2 114 aa12.99□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Rpl32P62911 135 aaKnown RBP12.99□□□□□ -0.33
Scn1b-203ENSMUST00000211945 PrcdQ00LT2 53 aa12.99□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Ndufa4Q62425 82 aaKnown RBP12.99□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Tmem239Q9DA47 151 aa12.99□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Gm43218A0A0G2JGT0 114 aa12.98□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Gm21834J3QN05 151 aa12.98□□□□□ -0.33
Scn1b-203ENSMUST00000211945 NpsP0C0P8 89 aa12.98□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Pmis2Q497Q9 96 aa12.98□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Cox7a1P56392 80 aa12.98□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Sdhaf1Q3U276 118 aa12.98□□□□□ -0.33
Scn1b-203ENSMUST00000211945 PdpnQ62011 172 aa12.98□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Gm12057A0A087WR21 115 aa12.97□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Zfp930A0A1D5RM15 441 aa12.97□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Mmp23O88676 391 aa12.97□□□□□ -0.33
Scn1b-203ENSMUST00000211945 P01729 129 aa12.97□□□□□ -0.33
Scn1b-203ENSMUST00000211945 Sumo2P61957 95 aaKnown RBP12.97□□□□□ -0.33
Scn1b-203ENSMUST00000211945 2010109I03RikQ9CQ11 111 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 57.1 ms