RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 AmtQ8CFA2 403 aaKnown RBP6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Vmn1r216Q8R257 298 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 BC107364E9Q5A2 140 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Rasl10aQ8K5A4 203 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Dpm3Q9D1Q4 92 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Fras1Q80T14 4010 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 TgO08710 2766 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm5157A0A087WRH8 301 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Igkv4-59A0A0B4J1I8 117 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 1810032O08RikE9PZV8 113 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Defa37K9J724 93 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Cox7cP17665 63 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Defa5P28312 93 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gng5Q80SZ7 68 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Supt4h1bQ9Z199 117 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Trav13-2A0A075B649 110 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm20773A0A0A6YXW2 232 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm20873J3QMQ9 232 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm20795J3QP49 232 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm21310J3QQ23 232 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 P0C1Z5 52 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm21440Q3TTD8 232 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Arl14eplQ3UKZ7 152 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Olfr553Q7TRS6 326 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 RnasekQ8K3C0 98 aa6.19□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm6812B1AXU1 112 aa6.18□□□□□ -1.42
Trim39-205ENSMUST00000173369 1700020N15RikL7MTX3 112 aa6.18□□□□□ -1.42
Trim39-205ENSMUST00000173369 S100a10P08207 97 aa6.18□□□□□ -1.42
Trim39-205ENSMUST00000173369 Psmb8P28063 276 aa6.18□□□□□ -1.42
Trim39-205ENSMUST00000173369 A130051J06RikQ8CAU1 227 aa6.18□□□□□ -1.42
Trim39-205ENSMUST00000173369 Ythdf2Q91YT7 579 aaKnown RBP6.18□□□□□ -1.42
Trim39-205ENSMUST00000173369 Pla2g2eQ9QUL3 142 aa6.18□□□□□ -1.42
Trim39-205ENSMUST00000173369 Olfr1024A2ASU7 327 aa6.18□□□□□ -1.42
Trim39-205ENSMUST00000173369 Apoc4Q61268 124 aa6.18□□□□□ -1.42
Trim39-205ENSMUST00000173369 ScxQ64124 207 aa6.18□□□□□ -1.42
Trim39-205ENSMUST00000173369 Sh3bgrl3Q91VW3 93 aa6.18□□□□□ -1.42
Trim39-205ENSMUST00000173369 Nhp2Q9CRB2 153 aaKnown RBP6.18□□□□□ -1.42
Trim39-205ENSMUST00000173369 Cd164l2Q9D6W7 172 aa6.18□□□□□ -1.42
Trim39-205ENSMUST00000173369 Lyrm7Q9DA03 104 aa6.18□□□□□ -1.42
Trim39-205ENSMUST00000173369 Ighv2-3A0A075B696 115 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Igkv20-101-2A0A0G2JDU3 113 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm28374F6SG70 93 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Rpl32-psP17932 135 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Serf2P84102 59 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Rbfox3Q8BIF2 374 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Tctex1d1Q9D5I4 173 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 MNCb-2875Q9DCB3 74 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Klf13Q9JJZ6 289 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Igkv4-81A0A0G2JEY5 119 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Ifitm6A0A1B0GS75 124 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 P01741 114 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Ighv1-62-3P01754 117 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm9944Q8C559 102 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Ufsp1Q9CZP0 217 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Fam213bQ9DB60 201 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 HampQ9EQ21 83 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Kcnip2Q9JJ69 270 aa6.17□□□□□ -1.42
Trim39-205ENSMUST00000173369 Trav13-1A0A075B644 110 aa6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 Trav4-4-dv10A0A075B651 110 aa6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 AngP21570 145 aa6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 Twist1P26687 206 aa6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 Prr3Q811B5 190 aaKnown RBP6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 Mrps11Q9DCA2 191 aaKnown RBP6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 Trav4-2A0A075B638 110 aa6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 Shisal2aA2A9G7 189 aa6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 P01811 117 aa6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 NpsP0C0P8 89 aa6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 Trappc1Q5NCF2 145 aa6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 Zfp248Q640N4 576 aa6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 Wfdc21Q8BTE6 63 aa6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 Plpp2Q9DAX2 276 aa6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 Npc2Q9Z0J0 149 aa6.16□□□□□ -1.42
Trim39-205ENSMUST00000173369 E130114P18RikF6S0S7 154 aa6.15□□□□□ -1.42
Trim39-205ENSMUST00000173369 Dand5Q76LW6 185 aa6.15□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm5105Q8C6Y9 112 aa6.15□□□□□ -1.42
Trim39-205ENSMUST00000173369 Wfdc2Q9DAU7 174 aa6.15□□□□□ -1.42
Trim39-205ENSMUST00000173369 Igll1P20764 209 aa6.15□□□□□ -1.42
Trim39-205ENSMUST00000173369 Snrpd3P62320 126 aaKnown RBP6.15□□□□□ -1.42
Trim39-205ENSMUST00000173369 Psmb2Q9R1P3 201 aa6.15□□□□□ -1.42
Trim39-205ENSMUST00000173369 Ctxnd1A0A1B0GST9 59 aa6.15□□□□□ -1.43
Trim39-205ENSMUST00000173369 P01750 117 aa6.15□□□□□ -1.43
Trim39-205ENSMUST00000173369 Gm1968Q3T9I3 115 aa6.15□□□□□ -1.43
Trim39-205ENSMUST00000173369 RetnQ99P87 114 aa6.15□□□□□ -1.43
Trim39-205ENSMUST00000173369 Mrpl55Q9CZ83 127 aa6.15□□□□□ -1.43
Trim39-205ENSMUST00000173369 Gm9508A0A1W2P7W0 230 aa6.14□□□□□ -1.43
Trim39-205ENSMUST00000173369 MycbQ6P8Z1 170 aa6.14□□□□□ -1.43
Trim39-205ENSMUST00000173369 Pla2g1bQ9Z0Y2 146 aa6.14□□□□□ -1.43
Trim39-205ENSMUST00000173369 Ighv8-12A0A0G2JDE1 119 aa6.14□□□□□ -1.43
Trim39-205ENSMUST00000173369 Gm17349F7BGH6 99 aa6.14□□□□□ -1.43
Trim39-205ENSMUST00000173369 Olfr311Q5NC59 308 aa6.14□□□□□ -1.43
Trim39-205ENSMUST00000173369 Defb11Q8R2I7 77 aa6.14□□□□□ -1.43
Trim39-205ENSMUST00000173369 4930470P17RikQ9D542 155 aa6.14□□□□□ -1.43
Trim39-205ENSMUST00000173369 Smim6Q3U0I6 56 aa6.13□□□□□ -1.43
Trim39-205ENSMUST00000173369 H2al1bA0A087WP11 105 aa6.13□□□□□ -1.43
Trim39-205ENSMUST00000173369 Gm21060J3KMU4 56 aa6.13□□□□□ -1.43
Trim39-205ENSMUST00000173369 H2al1kJ3QP08 105 aa6.13□□□□□ -1.43
Trim39-205ENSMUST00000173369 H2al1eQ810S6 105 aa6.13□□□□□ -1.43
Trim39-205ENSMUST00000173369 Olfr1012Q8VFJ7 311 aa6.13□□□□□ -1.43
Trim39-205ENSMUST00000173369 Mrpl35Q9CQL6 188 aa6.13□□□□□ -1.43
Trim39-205ENSMUST00000173369 H2al1mQ9DAD9 105 aa6.13□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 56.8 ms