RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Lyzl4Q9D925 145 aa11.58□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Utp20Q5XG71 2788 aaKnown RBP11.58□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Trav9-2A0A075B647 113 aa11.58□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Trav9-4A0A0B4J1K2 113 aa11.58□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Fam240aJ3QNP9 97 aa11.58□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Vamp8O70404 101 aa11.58□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Ccl19O70460 108 aa11.58□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Tmem97Q8VD00 176 aa11.58□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Trav8-1A0A075B641 109 aa11.57□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Gm14137Q8CE97 175 aa11.57□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Dynlrb2Q9DAJ5 96 aa11.57□□□□□ -0.56
Sdc1-205ENSMUST00000171158 A930009A15RikG3UYI6 118 aa11.57□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Defb45Q3V490 66 aa11.57□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Srsf12Q8C8K3 266 aa11.57□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Gm10295Q8CCF3 114 aa11.56□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Ube2e2Q91W82 201 aa11.56□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Iglc1A0A0G2JE99 106 aa11.55□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Gm44965A0A0N4SVR3 59 aa11.55□□□□□ -0.56
Sdc1-205ENSMUST00000171158 1810032O08RikE9PZV8 113 aa11.55□□□□□ -0.56
Sdc1-205ENSMUST00000171158 P01843 105 aa11.55□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Rs1Q9Z1L4 224 aa11.55□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Gm9913Q8BQQ2 135 aa11.55□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Ighv5-9-1A0A0A6YVS4 126 aa11.54□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Igkv2-137A0A0B4J1H6 120 aa11.54□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Gm9242J3QNY1 357 aa11.54□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Plac1Q9JI83 173 aa11.54□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Muc4Q8JZM8 3443 aa11.54□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Mllt11P97783 90 aa11.54□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Atxn7l1Q9CZ05 146 aa11.54□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Smr3aQ61900 147 aa11.53□□□□□ -0.56
Sdc1-205ENSMUST00000171158 P01802 115 aa11.53□□□□□ -0.56
Sdc1-205ENSMUST00000171158 S100a8P27005 89 aa11.53□□□□□ -0.56
Sdc1-205ENSMUST00000171158 AamdcQ8R0P4 122 aa11.53□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Ptpn13Q64512 2453 aa11.53□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Nbeal1E9PYP2 2688 aa11.52□□□□□ -0.56
Sdc1-205ENSMUST00000171158 Ighv1-85A0A075B5Y6 117 aa11.52□□□□□ -0.57
Sdc1-205ENSMUST00000171158 F11rO88792 300 aa11.52□□□□□ -0.57
Sdc1-205ENSMUST00000171158 P01753 117 aa11.52□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Ang3P97802 145 aa11.52□□□□□ -0.57
Sdc1-205ENSMUST00000171158 4930596D02RikQ3V0H9 216 aa11.52□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Gm1553Q66VB7 94 aa11.52□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Q9D8Q6 235 aa11.52□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Gm29666A0A087WQ99 126 aa11.52□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Krtap27-1E9PX37 202 aa11.52□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Fhl2O70433 279 aa11.52□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Ccl21aP84444 133 aa11.52□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Ccl21bP86792 133 aa11.52□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Ccl21cP86793 133 aa11.52□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Znhit3Q9CQK1 151 aa11.52□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Gm2564F6Z9S8 108 aa11.51□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Psmb8P28063 276 aa11.51□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Klhdc1Q80YG3 406 aa11.51□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Spag11Q8K4N2 71 aa11.51□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Timm17aQ9Z0V8 171 aa11.51□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Hectd1Q69ZR2 2618 aaKnown RBP11.51□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Gm42674D3YUT9 64 aa11.51□□□□□ -0.57
Sdc1-205ENSMUST00000171158 P06329 120 aa11.51□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Foxi2Q3I5G5 311 aa11.51□□□□□ -0.57
Sdc1-205ENSMUST00000171158 SrarpQ3ULG3 163 aa11.51□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Rbmxl2Q9DAE2 385 aaKnown RBP11.51□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Esp4A8R0T8 117 aa11.49□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Gata3P23772 443 aa11.49□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Trav7-2Q5R1I3 112 aa11.49□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Cox11Q6P8I6 275 aa11.49□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Gtf2h5Q8K2X8 71 aa11.49□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Synj2bpQ9D6K5 145 aa11.49□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Abca12E9Q876 2595 aa11.49□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Gm45753A0A1C7CYU8 86 aa11.49□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Fam240bJ3QMB3 78 aa11.49□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Hoxd3P09027 433 aa11.49□□□□□ -0.57
Sdc1-205ENSMUST00000171158 FcorP0DJI6 106 aa11.49□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Ociad2Q9D8W7 154 aa11.49□□□□□ -0.57
Sdc1-205ENSMUST00000171158 P01741 114 aa11.48□□□□□ -0.57
Sdc1-205ENSMUST00000171158 SvipQ3UZP4 77 aa11.48□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Q5BN45 167 aa11.48□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Gm26920S4R2A5 56 aa11.48□□□□□ -0.57
Sdc1-205ENSMUST00000171158 LrbaQ9ESE1 2856 aa11.48□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Ighv1-5A0A0A6YWG2 117 aa11.48□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Trav4n-4A0A075B615 110 aa11.47□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Nat8b-psE0CYC6 232 aa11.47□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Gm10490F6VBM2 120 aa11.47□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Dpm2Q9Z324 84 aa11.47□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Gm5819E9PZ96 154 aa11.47□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Reg3gO09049 174 aa11.47□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Gm21370Q3T9V6 190 aa11.47□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Spink13Q3UTS8 97 aa11.47□□□□□ -0.57
Sdc1-205ENSMUST00000171158 FlncQ8VHX6 2726 aaKnown RBP11.47□□□□□ -0.57
Sdc1-205ENSMUST00000171158 Higd1aQ9JLR9 95 aa11.46□□□□□ -0.57
Sdc1-205ENSMUST00000171158 TtrP07309 147 aa11.46□□□□□ -0.58
Sdc1-205ENSMUST00000171158 Try10Q792Z1 246 aaKnown RBP11.46□□□□□ -0.58
Sdc1-205ENSMUST00000171158 Cysltr1Q99JA4 352 aa11.46□□□□□ -0.58
Sdc1-205ENSMUST00000171158 Ucn2Q99ML8 113 aa11.46□□□□□ -0.58
Sdc1-205ENSMUST00000171158 AY761184Q9D848 116 aa11.46□□□□□ -0.58
Sdc1-205ENSMUST00000171158 Igkv4-68A0A0B4J1I7 117 aa11.45□□□□□ -0.58
Sdc1-205ENSMUST00000171158 Gm28044L7N1X0 119 aa11.45□□□□□ -0.58
Sdc1-205ENSMUST00000171158 Ccl25O35903 144 aa11.45□□□□□ -0.58
Sdc1-205ENSMUST00000171158 Ube2d1P61080 147 aaKnown RBP11.45□□□□□ -0.58
Sdc1-205ENSMUST00000171158 Ankrd39Q9D2X0 183 aa11.45□□□□□ -0.58
Sdc1-205ENSMUST00000171158 Slamf6Q9ET39 351 aa11.45□□□□□ -0.58
Sdc1-205ENSMUST00000171158 Runx1Q03347 451 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms