RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W YER189WP40104 122 aa5.32□□□□□ -1.56
SSO1YPL232W RAD26P40352 1085 aa5.32□□□□□ -1.56
SSO1YPL232W AIP1P46680 615 aaKnown RBP5.32□□□□□ -1.56
SSO1YPL232W YJR124CP47159 448 aa5.32□□□□□ -1.56
SSO1YPL232W POB3Q04636 552 aaKnown RBP5.32□□□□□ -1.56
SSO1YPL232W LEU1P07264 779 aaKnown RBP5.31□□□□□ -1.56
SSO1YPL232W YKR104WP0CE69 306 aa5.31□□□□□ -1.56
SSO1YPL232W PPH21P23594 369 aa5.31□□□□□ -1.56
SSO1YPL232W MNE1P24720 663 aa5.31□□□□□ -1.56
SSO1YPL232W APL1P27351 700 aa5.31□□□□□ -1.56
SSO1YPL232W TFC3P34111 1160 aa5.31□□□□□ -1.56
SSO1YPL232W LYS9P38999 446 aa5.31□□□□□ -1.56
SSO1YPL232W RRN7P40992 514 aa5.31□□□□□ -1.56
SSO1YPL232W NUP85P46673 744 aa5.31□□□□□ -1.56
SSO1YPL232W IPI3P53877 555 aa5.31□□□□□ -1.56
SSO1YPL232W VHS1Q03785 461 aa5.31□□□□□ -1.56
SSO1YPL232W INP2Q03824 705 aa5.31□□□□□ -1.56
SSO1YPL232W GRX8Q05926 109 aa5.31□□□□□ -1.56
SSO1YPL232W STP3Q05937 343 aa5.31□□□□□ -1.56
SSO1YPL232W YPR114WQ06107 315 aa5.31□□□□□ -1.56
SSO1YPL232W KAP95Q06142 861 aaKnown RBP5.31□□□□□ -1.56
SSO1YPL232W CDA2Q06703 312 aa5.31□□□□□ -1.56
SSO1YPL232W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
SSO1YPL232W YOL024WQ08172 172 aa5.31□□□□□ -1.56
SSO1YPL232W YAP7Q08182 245 aa5.31□□□□□ -1.56
SSO1YPL232W AIM39Q08223 395 aa5.31□□□□□ -1.56
SSO1YPL232W CDC33P07260 213 aaKnown RBP5.3□□□□□ -1.56
SSO1YPL232W MTF2P10849 440 aa5.3□□□□□ -1.56
SSO1YPL232W GLN4P13188 809 aaKnown RBP5.3□□□□□ -1.56
SSO1YPL232W LDB16P25587 256 aa5.3□□□□□ -1.56
SSO1YPL232W ADY2P25613 283 aa5.3□□□□□ -1.56
SSO1YPL232W LYP1P32487 611 aa5.3□□□□□ -1.56
SSO1YPL232W MPE1P35728 441 aaKnown RBP5.3□□□□□ -1.56
SSO1YPL232W ALY1P36117 915 aa5.3□□□□□ -1.56
SSO1YPL232W PAN6P40459 309 aa5.3□□□□□ -1.56
SSO1YPL232W CFD1P40558 293 aa5.3□□□□□ -1.56
SSO1YPL232W EMW1P42842 904 aaKnown RBP5.3□□□□□ -1.56
SSO1YPL232W SNZ3P43545 298 aa5.3□□□□□ -1.56
SSO1YPL232W RPS10BP46784 105 aaKnown RBP5.3□□□□□ -1.56
SSO1YPL232W HXT16P47185 567 aa5.3□□□□□ -1.56
SSO1YPL232W YGR237CP50089 785 aa5.3□□□□□ -1.56
SSO1YPL232W SNZ2P53824 298 aa5.3□□□□□ -1.56
SSO1YPL232W ESBP6P53918 673 aa5.3□□□□□ -1.56
SSO1YPL232W HXT15P54854 567 aa5.3□□□□□ -1.56
SSO1YPL232W PPN1Q04119 674 aa5.3□□□□□ -1.56
SSO1YPL232W ENT2Q05785 613 aa5.3□□□□□ -1.56
SSO1YPL232W BSC6Q08280 497 aa5.3□□□□□ -1.56
SSO1YPL232W RPS10AQ08745 105 aaPredicted RBP5.3□□□□□ -1.56
SSO1YPL232W YPL066WQ12194 479 aa5.3□□□□□ -1.56
SSO1YPL232W VPS5Q92331 675 aa5.3□□□□□ -1.56
SSO1YPL232W TUB1P09733 447 aaKnown RBP5.29□□□□□ -1.56
SSO1YPL232W EST1P17214 699 aaPredicted RBP5.29□□□□□ -1.56
SSO1YPL232W MSH3P25336 1018 aa5.29□□□□□ -1.56
SSO1YPL232W RNQ1P25367 405 aa5.29□□□□□ -1.56
SSO1YPL232W SEC1P30619 724 aaKnown RBP5.29□□□□□ -1.56
SSO1YPL232W GYP6P32806 458 aa5.29□□□□□ -1.56
SSO1YPL232W PIM1P36775 1133 aa5.29□□□□□ -1.56
SSO1YPL232W CCT6P39079 546 aa5.29□□□□□ -1.56
SSO1YPL232W SPG5P42933 373 aa5.29□□□□□ -1.56
SSO1YPL232W CTK3P46963 296 aaPredicted RBP5.29□□□□□ -1.56
SSO1YPL232W ASN2P49090 572 aaKnown RBP5.29□□□□□ -1.56
SSO1YPL232W YGR283CP53336 341 aaPredicted RBP5.29□□□□□ -1.56
SSO1YPL232W TEP1P53916 434 aa5.29□□□□□ -1.56
SSO1YPL232W EGD1Q02642 157 aaKnown RBP5.29□□□□□ -1.56
SSO1YPL232W TRS23Q03784 219 aa5.29□□□□□ -1.56
SSO1YPL232W SND1Q04007 877 aa5.29□□□□□ -1.56
SSO1YPL232W VID22Q05934 901 aa5.29□□□□□ -1.56
SSO1YPL232W YDL073WQ07454 984 aa5.29□□□□□ -1.56
SSO1YPL232W CIR2Q08822 631 aa5.29□□□□□ -1.56
SSO1YPL232W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
SSO1YPL232W GLE1Q12315 538 aa5.29□□□□□ -1.56
SSO1YPL232W BI2P03873 423 aa5.28□□□□□ -1.56
SSO1YPL232W MPH2P0CD99 609 aa5.28□□□□□ -1.56
SSO1YPL232W RED1P14291 827 aa5.28□□□□□ -1.56
SSO1YPL232W SCL1P21243 252 aaKnown RBP5.28□□□□□ -1.56
SSO1YPL232W AAT2P23542 418 aaKnown RBP5.28□□□□□ -1.56
SSO1YPL232W YKT6P36015 200 aaKnown RBP5.28□□□□□ -1.56
SSO1YPL232W TRZ1P36159 838 aaPredicted RBP5.28□□□□□ -1.56
SSO1YPL232W YAL037WP39728 267 aa5.28□□□□□ -1.56
SSO1YPL232W FAU1P40099 211 aa5.28□□□□□ -1.56
SSO1YPL232W SAP185P40856 1058 aa5.28□□□□□ -1.56
SSO1YPL232W CIR1P42940 261 aa5.28□□□□□ -1.56
SSO1YPL232W DLD2P46681 530 aaKnown RBP5.28□□□□□ -1.56
SSO1YPL232W PMT3P47190 753 aa5.28□□□□□ -1.56
SSO1YPL232W SPC105P53148 917 aa5.28□□□□□ -1.56
SSO1YPL232W VAC7P53950 1165 aa5.28□□□□□ -1.56
SSO1YPL232W YNL040WP53960 456 aaPredicted RBP5.28□□□□□ -1.56
SSO1YPL232W TRE2Q08693 809 aa5.28□□□□□ -1.56
SSO1YPL232W GUP2Q08929 609 aa5.28□□□□□ -1.56
SSO1YPL232W YPL272CQ08984 517 aa5.28□□□□□ -1.56
SSO1YPL232W VPS68Q12016 184 aa5.28□□□□□ -1.56
SSO1YPL232W YOR338WQ99326 363 aa5.28□□□□□ -1.56
SSO1YPL232W BI3Q9ZZW7 517 aa5.28□□□□□ -1.56
SSO1YPL232W BIK1P11709 440 aa5.27□□□□□ -1.57
SSO1YPL232W PMA2P19657 947 aa5.27□□□□□ -1.57
SSO1YPL232W GAL11P19659 1081 aa5.27□□□□□ -1.57
SSO1YPL232W PAT1P25644 796 aaKnown RBP5.27□□□□□ -1.57
SSO1YPL232W SPR1P32603 445 aa5.27□□□□□ -1.57
SSO1YPL232W TAF14P35189 244 aa5.27□□□□□ -1.57
SSO1YPL232W IRS4P36115 615 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms