RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C ACO1P19414 778 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
RPA43YOR340C KIN82P25341 720 aa3.98□□□□□ -1.77
RPA43YOR340C DPB3P27344 201 aa3.98□□□□□ -1.77
RPA43YOR340C MF(ALPHA)2P32435 120 aa3.98□□□□□ -1.77
RPA43YOR340C PHO11P35842 467 aa3.98□□□□□ -1.77
RPA43YOR340C SRP68P38687 599 aaKnown RBP3.98□□□□□ -1.77
RPA43YOR340C PHO12P38693 467 aa3.98□□□□□ -1.77
RPA43YOR340C SAW1P39735 261 aa3.98□□□□□ -1.77
RPA43YOR340C YEL076CP39971 216 aa3.98□□□□□ -1.77
RPA43YOR340C ASK10P48361 1146 aa3.98□□□□□ -1.77
RPA43YOR340C VPS4P52917 437 aa3.98□□□□□ -1.77
RPA43YOR340C IRC4Q03036 179 aa3.98□□□□□ -1.77
RPA43YOR340C RGC1Q06108 1083 aaKnown RBP3.98□□□□□ -1.77
RPA43YOR340C PRP22P24384 1145 aaKnown RBP3.97□□□□□ -1.77
RPA43YOR340C PTH2P34222 208 aa3.97□□□□□ -1.77
RPA43YOR340C KTR3P38130 404 aaPredicted RBP3.97□□□□□ -1.77
RPA43YOR340C STL1P39932 569 aa3.97□□□□□ -1.77
RPA43YOR340C BIT61P47041 543 aa3.97□□□□□ -1.77
RPA43YOR340C TRM44Q02648 567 aaKnown RBP3.97□□□□□ -1.77
RPA43YOR340C HLR1Q04429 423 aa3.97□□□□□ -1.77
RPA43YOR340C BRE1Q07457 700 aaKnown RBP3.97□□□□□ -1.77
RPA43YOR340C PHO81P17442 1178 aa3.96□□□□□ -1.78
RPA43YOR340C SEC18P18759 758 aaKnown RBP3.96□□□□□ -1.78
RPA43YOR340C HOP1P20050 605 aa3.96□□□□□ -1.78
RPA43YOR340C MSM1P22438 575 aa3.96□□□□□ -1.78
RPA43YOR340C PRP28P23394 588 aa3.96□□□□□ -1.78
RPA43YOR340C BCS1P32839 456 aa3.96□□□□□ -1.78
RPA43YOR340C RPT3P33298 428 aaKnown RBP3.96□□□□□ -1.78
RPA43YOR340C YHR033WP38690 423 aa3.96□□□□□ -1.78
RPA43YOR340C YNG2P38806 282 aaKnown RBP3.96□□□□□ -1.78
RPA43YOR340C YIL077CP40508 320 aa3.96□□□□□ -1.78
RPA43YOR340C BUD8P41698 603 aa3.96□□□□□ -1.78
RPA43YOR340C PXA1P41909 870 aa3.96□□□□□ -1.78
RPA43YOR340C TAF4P50105 388 aa3.96□□□□□ -1.78
RPA43YOR340C YGR117CP53270 476 aa3.96□□□□□ -1.78
RPA43YOR340C FHN1P53279 174 aa3.96□□□□□ -1.78
RPA43YOR340C SPO1P53541 631 aa3.96□□□□□ -1.78
RPA43YOR340C VPS72Q03388 795 aa3.96□□□□□ -1.78
RPA43YOR340C NSE5Q03718 556 aa3.96□□□□□ -1.78
RPA43YOR340C PPN1Q04119 674 aa3.96□□□□□ -1.78
RPA43YOR340C TMN2Q04562 672 aa3.96□□□□□ -1.78
RPA43YOR340C YDL121CQ07541 149 aa3.96□□□□□ -1.78
RPA43YOR340C CHS5Q12114 671 aaKnown RBP3.96□□□□□ -1.78
RPA43YOR340C RRG1Q12167 365 aaPredicted RBP3.96□□□□□ -1.78
RPA43YOR340C ARP7Q12406 477 aa3.96□□□□□ -1.78
RPA43YOR340C TOM1Q03280 3268 aa3.96□□□□□ -1.78
RPA43YOR340C POM152P39685 1337 aa3.95□□□□□ -1.78
RPA43YOR340C THR1P17423 357 aaKnown RBP3.95□□□□□ -1.78
RPA43YOR340C HPR1P17629 752 aaKnown RBP3.95□□□□□ -1.78
RPA43YOR340C CDC43P18898 376 aa3.95□□□□□ -1.78
RPA43YOR340C FEN2P25621 512 aaKnown RBP3.95□□□□□ -1.78
RPA43YOR340C RPS7AP26786 190 aaKnown RBP3.95□□□□□ -1.78
RPA43YOR340C GCD7P32502 381 aaPredicted RBP3.95□□□□□ -1.78
RPA43YOR340C YPT7P32939 208 aa3.95□□□□□ -1.78
RPA43YOR340C SDS22P36047 338 aa3.95□□□□□ -1.78
RPA43YOR340C EXO84P38261 753 aa3.95□□□□□ -1.78
RPA43YOR340C ACA1P39970 489 aa3.95□□□□□ -1.78
RPA43YOR340C SCS2P40075 244 aaKnown RBP3.95□□□□□ -1.78
RPA43YOR340C ARG2P40360 574 aa3.95□□□□□ -1.78
RPA43YOR340C NDC80P40460 691 aa3.95□□□□□ -1.78
RPA43YOR340C YIL089WP40500 205 aa3.95□□□□□ -1.78
RPA43YOR340C SDS3P40505 327 aa3.95□□□□□ -1.78
RPA43YOR340C SAP185P40856 1058 aa3.95□□□□□ -1.78
RPA43YOR340C GND2P53319 492 aa3.95□□□□□ -1.78
RPA43YOR340C TEP1P53916 434 aa3.95□□□□□ -1.78
RPA43YOR340C MOT3P54785 490 aaKnown RBP3.95□□□□□ -1.78
RPA43YOR340C SMX3P54999 86 aaPredicted RBP3.95□□□□□ -1.78
RPA43YOR340C TIM50Q02776 476 aa3.95□□□□□ -1.78
RPA43YOR340C PRP42Q03776 544 aaKnown RBP3.95□□□□□ -1.78
RPA43YOR340C MLH3Q12083 715 aa3.95□□□□□ -1.78
RPA43YOR340C RTK1Q12100 620 aaPredicted RBP3.95□□□□□ -1.78
RPA43YOR340C USV1Q12132 391 aa3.95□□□□□ -1.78
RPA43YOR340C SNU66Q12420 587 aaPredicted RBP3.95□□□□□ -1.78
RPA43YOR340C VPS5Q92331 675 aa3.95□□□□□ -1.78
RPA43YOR340C FLO1P32768 1537 aa3.95□□□□□ -1.78
RPA43YOR340C ABF1P14164 731 aa3.94□□□□□ -1.78
RPA43YOR340C KIN3P22209 435 aa3.94□□□□□ -1.78
RPA43YOR340C DBF20P32328 564 aa3.94□□□□□ -1.78
RPA43YOR340C NTH1P32356 751 aa3.94□□□□□ -1.78
RPA43YOR340C PET309P32522 965 aaPredicted RBP3.94□□□□□ -1.78
RPA43YOR340C TGL1P34163 548 aa3.94□□□□□ -1.78
RPA43YOR340C COS111P38308 924 aa3.94□□□□□ -1.78
RPA43YOR340C STU2P46675 888 aa3.94□□□□□ -1.78
RPA43YOR340C PUS4P48567 403 aaKnown RBP3.94□□□□□ -1.78
RPA43YOR340C RFX1P48743 811 aa3.94□□□□□ -1.78
RPA43YOR340C MNT2P53059 558 aa3.94□□□□□ -1.78
RPA43YOR340C YRB30P53107 440 aaPredicted RBP3.94□□□□□ -1.78
RPA43YOR340C ADH4P10127 382 aa3.93□□□□□ -1.78
RPA43YOR340C SNF3P10870 884 aa3.93□□□□□ -1.78
RPA43YOR340C MTC7P32633 139 aa3.93□□□□□ -1.78
RPA43YOR340C MTH1P35198 433 aa3.93□□□□□ -1.78
RPA43YOR340C APM3P38153 483 aa3.93□□□□□ -1.78
RPA43YOR340C SSP120P39931 234 aaKnown RBP3.93□□□□□ -1.78
RPA43YOR340C PRM2P40534 656 aa3.93□□□□□ -1.78
RPA43YOR340C IMA5P40884 581 aa3.93□□□□□ -1.78
RPA43YOR340C ERR3P42222 437 aa3.93□□□□□ -1.78
RPA43YOR340C YFH7P43591 353 aa3.93□□□□□ -1.78
RPA43YOR340C MPS3P47069 682 aa3.93□□□□□ -1.78
RPA43YOR340C CTR1P49573 406 aa3.93□□□□□ -1.78
RPA43YOR340C ATG4P53867 494 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms