RNA–Protein interactions for RNA: YJL048C

UBX6, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeast

Gene UBX6, Length 1,191 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBX6	YJL048C	LYS9	P38999	446 aa		11.24	□□□□□ -0.61
UBX6	YJL048C	VAC7	P53950	1165 aa		11.24	□□□□□ -0.61
UBX6	YJL048C	APL5	Q08951	932 aa	Known RBP	11.24	□□□□□ -0.61
UBX6	YJL048C	RPL43A	P0CX25	92 aa	Known RBP	11.23	□□□□□ -0.61
UBX6	YJL048C	RPL43B	P0CX26	92 aa		11.23	□□□□□ -0.61
UBX6	YJL048C	MNE1	P24720	663 aa		11.23	□□□□□ -0.61
UBX6	YJL048C	IPI3	P53877	555 aa		11.23	□□□□□ -0.61
UBX6	YJL048C	YPR114W	Q06107	315 aa		11.23	□□□□□ -0.61
UBX6	YJL048C	GPR1	Q12361	961 aa		11.23	□□□□□ -0.61
UBX6	YJL048C	INH1	P01097	85 aa		11.22	□□□□□ -0.61
UBX6	YJL048C	SPT5	P27692	1063 aa	Known RBP	11.22	□□□□□ -0.61
UBX6	YJL048C	MPE1	P35728	441 aa	Known RBP	11.22	□□□□□ -0.61
UBX6	YJL048C	IRS4	P36115	615 aa	Known RBP	11.22	□□□□□ -0.61
UBX6	YJL048C	SAP185	P40856	1058 aa		11.22	□□□□□ -0.61
UBX6	YJL048C	BET4	Q00618	327 aa		11.22	□□□□□ -0.61
UBX6	YJL048C	YMR018W	Q04364	514 aa		11.22	□□□□□ -0.61
UBX6	YJL048C	POB3	Q04636	552 aa	Known RBP	11.22	□□□□□ -0.61
UBX6	YJL048C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	11.22	□□□□□ -0.61	not detected
UBX6	YJL048C	SNT1	P25357	1226 aa		11.21	□□□□□ -0.61
UBX6	YJL048C	SEC1	P30619	724 aa	Known RBP	11.21	□□□□□ -0.61
UBX6	YJL048C	RPS0A	P32905	252 aa	Known RBP	11.21	□□□□□ -0.61
UBX6	YJL048C	EXO5	P38289	585 aa		11.21	□□□□□ -0.61
UBX6	YJL048C	TUB1	P09733	447 aa	Known RBP	11.2	□□□□□ -0.62
UBX6	YJL048C	RED1	P14291	827 aa		11.2	□□□□□ -0.62
UBX6	YJL048C	MRPL32	P25348	183 aa		11.2	□□□□□ -0.62
UBX6	YJL048C	SMC1	P32908	1225 aa		11.2	□□□□□ -0.62
UBX6	YJL048C	CIR1	P42940	261 aa		11.2	□□□□□ -0.62
UBX6	YJL048C	RSM10	Q03201	203 aa		11.2	□□□□□ -0.62
UBX6	YJL048C	VHS1	Q03785	461 aa		11.2	□□□□□ -0.62
UBX6	YJL048C	CDC37	P06101	506 aa	Known RBP	11.19	□□□□□ -0.62
UBX6	YJL048C	YKR104W	P0CE69	306 aa		11.19	□□□□□ -0.62
UBX6	YJL048C	PAT1	P25644	796 aa	Known RBP	11.19	□□□□□ -0.62
UBX6	YJL048C	TFC3	P34111	1160 aa		11.19	□□□□□ -0.62
UBX6	YJL048C	ALR2	P43553	858 aa		11.19	□□□□□ -0.62
UBX6	YJL048C	DLD2	P46681	530 aa	Known RBP	11.19	□□□□□ -0.62
UBX6	YJL048C	HXT16	P47185	567 aa		11.19	□□□□□ -0.62
UBX6	YJL048C	TRF5	P48561	642 aa	Known RBP	11.19	□□□□□ -0.62
UBX6	YJL048C	SUR7	P54003	302 aa		11.19	□□□□□ -0.62
UBX6	YJL048C	HXT15	P54854	567 aa		11.19	□□□□□ -0.62
UBX6	YJL048C	SND1	Q04007	877 aa		11.19	□□□□□ -0.62
UBX6	YJL048C	CWC2	Q12046	339 aa	Predicted RBP	11.19	□□□□□ -0.62
UBX6	YJL048C	AFI1	Q99222	893 aa		11.19	□□□□□ -0.62
UBX6	YJL048C	GLN4	P13188	809 aa	Known RBP	11.18	□□□□□ -0.62
UBX6	YJL048C	PMA2	P19657	947 aa		11.18	□□□□□ -0.62
UBX6	YJL048C	RNQ1	P25367	405 aa		11.18	□□□□□ -0.62
UBX6	YJL048C	AIM26	P32858	118 aa		11.18	□□□□□ -0.62
UBX6	YJL048C	YIL054W	P40524	105 aa		11.18	□□□□□ -0.62
UBX6	YJL048C	RPS10B	P46784	105 aa	Known RBP	11.18	□□□□□ -0.62
UBX6	YJL048C	BNI4	P53858	892 aa		11.18	□□□□□ -0.62
UBX6	YJL048C	YNL040W	P53960	456 aa	Predicted RBP	11.18	□□□□□ -0.62
UBX6	YJL048C	PPN1	Q04119	674 aa		11.18	□□□□□ -0.62
UBX6	YJL048C	GRX8	Q05926	109 aa		11.18	□□□□□ -0.62
UBX6	YJL048C	STP3	Q05937	343 aa		11.18	□□□□□ -0.62
UBX6	YJL048C	KAP95	Q06142	861 aa	Known RBP	11.18	□□□□□ -0.62
UBX6	YJL048C	RPS10A	Q08745	105 aa	Predicted RBP	11.18	□□□□□ -0.62
UBX6	YJL048C	MTF2	P10849	440 aa		11.17	□□□□□ -0.62
UBX6	YJL048C	LYP1	P32487	611 aa		11.17	□□□□□ -0.62
UBX6	YJL048C	ELM1	P32801	640 aa		11.17	□□□□□ -0.62
UBX6	YJL048C	YET1	P35723	206 aa		11.17	□□□□□ -0.62
UBX6	YJL048C	SPC42	P36094	363 aa		11.17	□□□□□ -0.62
UBX6	YJL048C	FUI1	P38196	639 aa		11.17	□□□□□ -0.62
UBX6	YJL048C	CEM1	P39525	442 aa		11.17	□□□□□ -0.62
UBX6	YJL048C	RRN7	P40992	514 aa		11.17	□□□□□ -0.62
UBX6	YJL048C	RKM2	Q03942	479 aa		11.17	□□□□□ -0.62
UBX6	YJL048C	YDR222W	Q04925	415 aa		11.17	□□□□□ -0.62
UBX6	YJL048C	TRE2	Q08693	809 aa		11.17	□□□□□ -0.62
UBX6	YJL048C	GLE1	Q12315	538 aa		11.17	□□□□□ -0.62
UBX6	YJL048C	SEC39	Q12745	709 aa		11.17	□□□□□ -0.62
UBX6	YJL048C	IPP1	P00817	287 aa	Known RBP	11.16	□□□□□ -0.62
UBX6	YJL048C	YEL028W	P39989	153 aa		11.16	□□□□□ -0.62
UBX6	YJL048C	NUP85	P46673	744 aa		11.16	□□□□□ -0.62
UBX6	YJL048C	TAD1	P53065	400 aa		11.16	□□□□□ -0.62
UBX6	YJL048C	SWC7	Q06707	132 aa		11.16	□□□□□ -0.62
UBX6	YJL048C	BSC6	Q08280	497 aa		11.16	□□□□□ -0.62
UBX6	YJL048C	THI21	Q08975	551 aa		11.16	□□□□□ -0.62
UBX6	YJL048C	AAT2	P23542	418 aa	Known RBP	11.15	□□□□□ -0.62
UBX6	YJL048C	RRN6	P32786	894 aa		11.15	□□□□□ -0.62
UBX6	YJL048C	YCK3	P39962	524 aa		11.15	□□□□□ -0.62
UBX6	YJL048C	SPG5	P42933	373 aa		11.15	□□□□□ -0.62
UBX6	YJL048C	SPC105	P53148	917 aa		11.15	□□□□□ -0.62
UBX6	YJL048C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	11.15	□□□□□ -0.62	not detected
UBX6	YJL048C	MCP2	Q06567	569 aa		11.15	□□□□□ -0.62
UBX6	YJL048C	OCA6	Q12454	224 aa		11.15	□□□□□ -0.62
UBX6	YJL048C	YPK1	P12688	680 aa	Known RBP	11.14	□□□□□ -0.63
UBX6	YJL048C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	11.14	□□□□□ -0.63	not detected
UBX6	YJL048C	NIP100	P33420	868 aa		11.14	□□□□□ -0.63
UBX6	YJL048C	TDA3	P38758	523 aa		11.14	□□□□□ -0.63
UBX6	YJL048C	CCT5	P40413	562 aa	Known RBP	11.14	□□□□□ -0.63
UBX6	YJL048C	ZIM17	P42844	174 aa		11.14	□□□□□ -0.63
UBX6	YJL048C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	11.14	□□□□□ -0.63	not detected
UBX6	YJL048C	TEP1	P53916	434 aa		11.14	□□□□□ -0.63
UBX6	YJL048C	TRS23	Q03784	219 aa		11.14	□□□□□ -0.63
UBX6	YJL048C	CMS1	Q07897	291 aa	Known RBP	11.14	□□□□□ -0.63
UBX6	YJL048C	CIR2	Q08822	631 aa		11.14	□□□□□ -0.63
UBX6	YJL048C	SCH9	P11792	824 aa	Known RBP	11.13	□□□□□ -0.63
UBX6	YJL048C	TUP1	P16649	713 aa		11.13	□□□□□ -0.63
UBX6	YJL048C	CLC1	P17891	233 aa		11.13	□□□□□ -0.63
UBX6	YJL048C	GAL11	P19659	1081 aa		11.13	□□□□□ -0.63
UBX6	YJL048C	SPR1	P32603	445 aa		11.13	□□□□□ -0.63
UBX6	YJL048C	ADE17	P38009	592 aa	Known RBP	11.13	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms