RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C HIS6P40545 261 aa3.77□□□□□ -1.81
PDX1YGR193C RLP7P40693 322 aaKnown RBP3.77□□□□□ -1.81
PDX1YGR193C SNX4P47057 423 aa3.77□□□□□ -1.81
PDX1YGR193C UPF3P48412 387 aaKnown RBP3.77□□□□□ -1.81
PDX1YGR193C BPL1P48445 690 aaPredicted RBP3.77□□□□□ -1.81
PDX1YGR193C YDL183CP48569 320 aa3.77□□□□□ -1.81
PDX1YGR193C LYS4P49367 693 aaPredicted RBP3.77□□□□□ -1.81
PDX1YGR193C NPY1P53164 384 aa3.77□□□□□ -1.81
PDX1YGR193C YGR125WP53273 1036 aa3.77□□□□□ -1.81
PDX1YGR193C YAP1802P53309 568 aa3.77□□□□□ -1.81
PDX1YGR193C BRE5P53741 515 aaKnown RBP3.77□□□□□ -1.81
PDX1YGR193C EOS1P53938 366 aa3.77□□□□□ -1.81
PDX1YGR193C RNT1Q02555 471 aa3.77□□□□□ -1.81
PDX1YGR193C YDR131CQ03899 556 aa3.77□□□□□ -1.81
PDX1YGR193C RTN1Q04947 295 aaKnown RBP3.77□□□□□ -1.81
PDX1YGR193C KAP95Q06142 861 aaKnown RBP3.77□□□□□ -1.81
PDX1YGR193C CDA1Q06702 301 aa3.77□□□□□ -1.81
PDX1YGR193C OPI10Q08202 246 aa3.77□□□□□ -1.81
PDX1YGR193C DNL4Q08387 944 aaPredicted RBP3.77□□□□□ -1.81
PDX1YGR193C ICL2Q12031 575 aa3.77□□□□□ -1.81
PDX1YGR193C YPL066WQ12194 479 aa3.77□□□□□ -1.81
PDX1YGR193C MDY2Q12285 212 aa3.77□□□□□ -1.81
PDX1YGR193C YRF1-4O13559 1382 aa3.76□□□□□ -1.81
PDX1YGR193C YML133CQ03099 1374 aa3.76□□□□□ -1.81
PDX1YGR193C YLL067CQ07888 1374 aa3.76□□□□□ -1.81
PDX1YGR193C YLL066CQ99208 1374 aa3.76□□□□□ -1.81
PDX1YGR193C CPA2P03965 1118 aaKnown RBP3.76□□□□□ -1.81
PDX1YGR193C ARG81P05085 880 aa3.76□□□□□ -1.81
PDX1YGR193C YAP1P19880 650 aaKnown RBP3.76□□□□□ -1.81
PDX1YGR193C PRP2P20095 876 aaPredicted RBP3.76□□□□□ -1.81
PDX1YGR193C BMH1P29311 267 aaKnown RBP3.76□□□□□ -1.81
PDX1YGR193C MEI4P29467 408 aa3.76□□□□□ -1.81
PDX1YGR193C RRP1P35178 278 aaPredicted RBP3.76□□□□□ -1.81
PDX1YGR193C RMA1P36001 430 aaKnown RBP3.76□□□□□ -1.81
PDX1YGR193C YPT52P36018 234 aaKnown RBP3.76□□□□□ -1.81
PDX1YGR193C DID4P36108 232 aa3.76□□□□□ -1.81
PDX1YGR193C SMF2P38778 549 aa3.76□□□□□ -1.81
PDX1YGR193C LSM5P40089 93 aaKnown RBP3.76□□□□□ -1.81
PDX1YGR193C YTA12P40341 825 aa3.76□□□□□ -1.81
PDX1YGR193C YJR061WP40355 935 aa3.76□□□□□ -1.81
PDX1YGR193C RSM25P40496 264 aa3.76□□□□□ -1.81
PDX1YGR193C BNA6P43619 295 aa3.76□□□□□ -1.81
PDX1YGR193C BUL1P48524 976 aa3.76□□□□□ -1.81
PDX1YGR193C TAF4P50105 388 aa3.76□□□□□ -1.81
PDX1YGR193C TEL2P53038 688 aa3.76□□□□□ -1.81
PDX1YGR193C GTR1Q00582 310 aa3.76□□□□□ -1.81
PDX1YGR193C TOF2Q02208 771 aa3.76□□□□□ -1.81
PDX1YGR193C MRPS17Q03246 237 aaPredicted RBP3.76□□□□□ -1.81
PDX1YGR193C RBS1Q05672 457 aaKnown RBP3.76□□□□□ -1.81
PDX1YGR193C UTP21Q06078 939 aaPredicted RBP3.76□□□□□ -1.81
PDX1YGR193C SEC10Q06245 871 aa3.76□□□□□ -1.81
PDX1YGR193C PEX19Q07418 342 aa3.76□□□□□ -1.81
PDX1YGR193C AIM39Q08223 395 aa3.76□□□□□ -1.81
PDX1YGR193C ABP140Q08641 628 aaKnown RBP3.76□□□□□ -1.81
PDX1YGR193C VIK1Q12045 647 aa3.76□□□□□ -1.81
PDX1YGR193C PAR32Q12515 295 aaKnown RBP3.76□□□□□ -1.81
PDX1YGR193C SSM4P40318 1319 aa3.75□□□□□ -1.81
PDX1YGR193C SPE1P08432 466 aa3.75□□□□□ -1.81
PDX1YGR193C THR1P17423 357 aaKnown RBP3.75□□□□□ -1.81
PDX1YGR193C CDC15P27636 974 aa3.75□□□□□ -1.81
PDX1YGR193C POT1P27796 417 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
PDX1YGR193C CDC12P32468 407 aaKnown RBP3.75□□□□□ -1.81
PDX1YGR193C PAH1P32567 862 aa3.75□□□□□ -1.81
PDX1YGR193C GYP6P32806 458 aa3.75□□□□□ -1.81
PDX1YGR193C SRP101P32916 621 aa3.75□□□□□ -1.81
PDX1YGR193C CPR5P35176 225 aa3.75□□□□□ -1.81
PDX1YGR193C LHS1P36016 881 aa3.75□□□□□ -1.81
PDX1YGR193C YKL151CP36059 337 aa3.75□□□□□ -1.81
PDX1YGR193C LAS1P36146 502 aaPredicted RBP3.75□□□□□ -1.81
PDX1YGR193C ATP3P38077 311 aaKnown RBP3.75□□□□□ -1.81
PDX1YGR193C MED8P38304 223 aa3.75□□□□□ -1.81
PDX1YGR193C SIP3P38717 1229 aa3.75□□□□□ -1.81
PDX1YGR193C MBP1P39678 833 aa3.75□□□□□ -1.81
PDX1YGR193C MNN11P46985 422 aaKnown RBP3.75□□□□□ -1.81
PDX1YGR193C APS3P47064 194 aa3.75□□□□□ -1.81
PDX1YGR193C FAA4P47912 694 aaKnown RBP3.75□□□□□ -1.81
PDX1YGR193C PSP2P50109 593 aaKnown RBP3.75□□□□□ -1.81
PDX1YGR193C ASE1P50275 885 aa3.75□□□□□ -1.81
PDX1YGR193C PCL10P53124 433 aa3.75□□□□□ -1.81
PDX1YGR193C LSG1P53145 640 aaKnown RBP3.75□□□□□ -1.81
PDX1YGR193C YBP2P53169 641 aa3.75□□□□□ -1.81
PDX1YGR193C YGR053CP53234 283 aa3.75□□□□□ -1.81
PDX1YGR193C IPI3P53877 555 aa3.75□□□□□ -1.81
PDX1YGR193C KTR6P54070 446 aa3.75□□□□□ -1.81
PDX1YGR193C PRO2P54885 456 aaKnown RBP3.75□□□□□ -1.81
PDX1YGR193C ATG17Q06410 417 aa3.75□□□□□ -1.81
PDX1YGR193C YCG1Q06680 1035 aa3.75□□□□□ -1.81
PDX1YGR193C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
PDX1YGR193C RRT8Q08219 342 aa3.75□□□□□ -1.81
PDX1YGR193C VHS3Q08438 674 aa3.75□□□□□ -1.81
PDX1YGR193C KEL3Q08979 651 aaPredicted RBP3.75□□□□□ -1.81
PDX1YGR193C MED4Q12343 284 aa3.75□□□□□ -1.81
PDX1YGR193C NPC2Q12408 173 aa3.75□□□□□ -1.81
PDX1YGR193C ISA2Q12425 185 aa3.75□□□□□ -1.81
PDX1YGR193C FRE6Q12473 712 aa3.75□□□□□ -1.81
PDX1YGR193C SRN2Q99176 213 aa3.75□□□□□ -1.81
PDX1YGR193C LAM4P38800 1345 aa3.74□□□□□ -1.81
PDX1YGR193C SEM1O94742 89 aa3.74□□□□□ -1.81
PDX1YGR193C FBP1P09201 348 aa3.74□□□□□ -1.81
PDX1YGR193C CDC34P14682 295 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms