RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W AAT1Q01802 451 aa2.66□□□□□ -1.98
VPS52YDR484W ARA2Q04212 335 aa2.66□□□□□ -1.98
VPS52YDR484W CRF1Q04930 467 aa2.66□□□□□ -1.98
VPS52YDR484W BRE1Q07457 700 aaKnown RBP2.66□□□□□ -1.98
VPS52YDR484W AIM6Q07716 390 aa2.66□□□□□ -1.98
VPS52YDR484W PCL8Q08966 492 aa2.66□□□□□ -1.98
VPS52YDR484W BI2P03873 423 aa2.66□□□□□ -1.98
VPS52YDR484W MSS18P08593 268 aa2.66□□□□□ -1.98
VPS52YDR484W MIS1P09440 975 aaKnown RBP2.66□□□□□ -1.98
VPS52YDR484W PHO81P17442 1178 aa2.66□□□□□ -1.98
VPS52YDR484W GSY2P27472 705 aa2.66□□□□□ -1.98
VPS52YDR484W SWC3P31376 625 aa2.66□□□□□ -1.98
VPS52YDR484W GDA1P32621 518 aa2.66□□□□□ -1.98
VPS52YDR484W ARB1P40024 610 aaKnown RBP2.66□□□□□ -1.98
VPS52YDR484W CAB2P40506 365 aa2.66□□□□□ -1.98
VPS52YDR484W FAF1P40546 346 aaPredicted RBP2.66□□□□□ -1.98
VPS52YDR484W UBP16Q02863 499 aa2.66□□□□□ -1.98
VPS52YDR484W YPL108WQ02872 168 aaPredicted RBP2.66□□□□□ -1.98
VPS52YDR484W ATG21Q02887 496 aa2.66□□□□□ -1.98
VPS52YDR484W RIM13Q03792 727 aa2.66□□□□□ -1.98
VPS52YDR484W HIM1Q06674 414 aa2.66□□□□□ -1.98
VPS52YDR484W IWR1Q07532 353 aaPredicted RBP2.66□□□□□ -1.98
VPS52YDR484W SEC3P33332 1336 aaKnown RBP2.65□□□□□ -1.98
VPS52YDR484W POL3P15436 1097 aa2.65□□□□□ -1.99
VPS52YDR484W NUP1P20676 1076 aa2.65□□□□□ -1.99
VPS52YDR484W PDE1P22434 369 aa2.65□□□□□ -1.99
VPS52YDR484W APN1P22936 367 aa2.65□□□□□ -1.99
VPS52YDR484W MCM3P24279 971 aaKnown RBP2.65□□□□□ -1.99
VPS52YDR484W FRD1P32614 470 aaKnown RBP2.65□□□□□ -1.99
VPS52YDR484W CIR1P42940 261 aa2.65□□□□□ -1.99
VPS52YDR484W GAT1P43574 510 aa2.65□□□□□ -1.99
VPS52YDR484W ATP23P53722 227 aa2.65□□□□□ -1.99
VPS52YDR484W ESF2P53743 316 aaKnown RBP2.65□□□□□ -1.99
VPS52YDR484W RAD33Q04231 177 aa2.65□□□□□ -1.99
VPS52YDR484W EIS1Q05050 843 aaKnown RBP2.65□□□□□ -1.99
VPS52YDR484W YDL242WQ07746 117 aa2.65□□□□□ -1.99
VPS52YDR484W RDL1Q12305 139 aaKnown RBP2.65□□□□□ -1.99
VPS52YDR484W AMD2P22580 549 aa2.64□□□□□ -1.99
VPS52YDR484W YJU2P28320 278 aaPredicted RBP2.64□□□□□ -1.99
VPS52YDR484W RPF2P36160 344 aaKnown RBP2.64□□□□□ -1.99
VPS52YDR484W YHL041WP38730 149 aa2.64□□□□□ -1.99
VPS52YDR484W ARO9P38840 513 aaPredicted RBP2.64□□□□□ -1.99
VPS52YDR484W LTP1P40347 161 aa2.64□□□□□ -1.99
VPS52YDR484W YML119WQ03208 357 aa2.64□□□□□ -1.99
VPS52YDR484W IOC4Q04213 475 aa2.64□□□□□ -1.99
VPS52YDR484W SPN1Q06505 410 aaPredicted RBP2.64□□□□□ -1.99
VPS52YDR484W BSP1Q06604 576 aa2.64□□□□□ -1.99
VPS52YDR484W LCB4Q12246 624 aa2.64□□□□□ -1.99
VPS52YDR484W YBR255C-AQ3E776 120 aa2.64□□□□□ -1.99
VPS52YDR484W RIT1P23796 513 aa2.64□□□□□ -1.99
VPS52YDR484W SIP1P32578 815 aa2.64□□□□□ -1.99
VPS52YDR484W SAE2P46946 345 aa2.64□□□□□ -1.99
VPS52YDR484W YJR008WP47085 338 aa2.64□□□□□ -1.99
VPS52YDR484W CPR6P53691 371 aaKnown RBP2.64□□□□□ -1.99
VPS52YDR484W UBX4P54730 416 aa2.64□□□□□ -1.99
VPS52YDR484W MOT3P54785 490 aaKnown RBP2.64□□□□□ -1.99
VPS52YDR484W PLM2Q04383 521 aa2.64□□□□□ -1.99
VPS52YDR484W HRD3Q05787 833 aa2.64□□□□□ -1.99
VPS52YDR484W CYK3Q07533 885 aa2.64□□□□□ -1.99
VPS52YDR484W YPL191CQ08930 360 aa2.64□□□□□ -1.99
VPS52YDR484W SEC18P18759 758 aaKnown RBP2.63□□□□□ -1.99
VPS52YDR484W MBR1P23493 339 aa2.63□□□□□ -1.99
VPS52YDR484W TPM2P40414 161 aa2.63□□□□□ -1.99
VPS52YDR484W SKP2P42843 763 aa2.63□□□□□ -1.99
VPS52YDR484W BPL1P48445 690 aaPredicted RBP2.63□□□□□ -1.99
VPS52YDR484W YML053CQ04978 212 aa2.63□□□□□ -1.99
VPS52YDR484W ICL2Q12031 575 aa2.63□□□□□ -1.99
VPS52YDR484W ADE3P07245 946 aaKnown RBP2.62□□□□□ -1.99
VPS52YDR484W PTP1P25044 335 aa2.62□□□□□ -1.99
VPS52YDR484W RRP43P25359 394 aaPredicted RBP2.62□□□□□ -1.99
VPS52YDR484W GCD7P32502 381 aaPredicted RBP2.62□□□□□ -1.99
VPS52YDR484W BEM3P32873 1128 aa2.62□□□□□ -1.99
VPS52YDR484W KES1P35844 434 aaKnown RBP2.62□□□□□ -1.99
VPS52YDR484W FSH1P38777 243 aaKnown RBP2.62□□□□□ -1.99
VPS52YDR484W VPS8P39702 1274 aa2.62□□□□□ -1.99
VPS52YDR484W SAP1P39955 897 aaKnown RBP2.62□□□□□ -1.99
VPS52YDR484W XBP1P40489 647 aa2.62□□□□□ -1.99
VPS52YDR484W SNO3P43544 222 aa2.62□□□□□ -1.99
VPS52YDR484W BST1P43571 1029 aa2.62□□□□□ -1.99
VPS52YDR484W NMD5P46970 1048 aa2.62□□□□□ -1.99
VPS52YDR484W IMA1P53051 589 aa2.62□□□□□ -1.99
VPS52YDR484W YPL071CQ02864 156 aa2.62□□□□□ -1.99
VPS52YDR484W PNO1Q99216 274 aaKnown RBP2.62□□□□□ -1.99
VPS52YDR484W PET122P10355 254 aa2.62□□□□□ -1.99
VPS52YDR484W BIK1P11709 440 aa2.62□□□□□ -1.99
VPS52YDR484W URE2P23202 354 aaKnown RBP2.62□□□□□ -1.99
VPS52YDR484W MRPL36P36531 177 aa2.62□□□□□ -1.99
VPS52YDR484W VBA2P38358 474 aaKnown RBP2.62□□□□□ -1.99
VPS52YDR484W SPC72P39723 622 aa2.62□□□□□ -1.99
VPS52YDR484W ACA1P39970 489 aa2.62□□□□□ -1.99
VPS52YDR484W ULP2P40537 1034 aaPredicted RBP2.62□□□□□ -1.99
VPS52YDR484W BNA3P47039 444 aaKnown RBP2.62□□□□□ -1.99
VPS52YDR484W ERG13P54839 491 aaKnown RBP2.62□□□□□ -1.99
VPS52YDR484W TPO3Q06451 622 aa2.62□□□□□ -1.99
VPS52YDR484W RVB2Q12464 471 aaKnown RBP2.62□□□□□ -1.99
VPS52YDR484W CET1O13297 549 aaPredicted RBP2.61□□□□□ -1.99
VPS52YDR484W PGI1P12709 554 aaKnown RBP2.61□□□□□ -1.99
VPS52YDR484W MSM1P22438 575 aa2.61□□□□□ -1.99
VPS52YDR484W CLB4P24871 460 aa2.61□□□□□ -1.99
VPS52YDR484W ARP2P32381 391 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms