RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC1, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC1	YDR177W	AMA1	P50082	593 aa		5.07	□□□□□ -1.6
UBC1	YDR177W	YGR066C	P53242	292 aa		5.07	□□□□□ -1.6
UBC1	YDR177W	TEX1	P53851	422 aa	Known RBP	5.07	□□□□□ -1.6
UBC1	YDR177W	YMR187C	Q03236	431 aa		5.07	□□□□□ -1.6
UBC1	YDR177W	RAD30	Q04049	632 aa		5.07	□□□□□ -1.6
UBC1	YDR177W	PSK2	Q08217	1101 aa		5.07	□□□□□ -1.6
UBC1	YDR177W	TCO89	Q08921	799 aa		5.07	□□□□□ -1.6
UBC1	YDR177W	YLR122C	Q12312	125 aa		5.07	□□□□□ -1.6
UBC1	YDR177W	SUI3	P09064	285 aa	Known RBP	5.06	□□□□□ -1.6
UBC1	YDR177W	CBS1	P14066	229 aa		5.06	□□□□□ -1.6
UBC1	YDR177W	YCK2	P23292	546 aa	Known RBP	5.06	□□□□□ -1.6
UBC1	YDR177W	DSS4	P32601	143 aa		5.06	□□□□□ -1.6
UBC1	YDR177W	KES1	P35844	434 aa	Known RBP	5.06	□□□□□ -1.6
UBC1	YDR177W	LNP1	P38878	278 aa		5.06	□□□□□ -1.6
UBC1	YDR177W	RTS1	P38903	757 aa		5.06	□□□□□ -1.6
UBC1	YDR177W	PFK26	P40433	827 aa	Known RBP	5.06	□□□□□ -1.6
UBC1	YDR177W	MRX6	P48564	524 aa		5.06	□□□□□ -1.6
UBC1	YDR177W	MUB1	Q03162	620 aa		5.06	□□□□□ -1.6
UBC1	YDR177W	YML119W	Q03208	357 aa		5.06	□□□□□ -1.6
UBC1	YDR177W	THI22	Q06490	572 aa		5.06	□□□□□ -1.6
UBC1	YDR177W	ENT4	Q07872	247 aa		5.06	□□□□□ -1.6
UBC1	YDR177W	ICL2	Q12031	575 aa		5.06	□□□□□ -1.6
UBC1	YDR177W	HMI1	Q12039	706 aa		5.06	□□□□□ -1.6
UBC1	YDR177W	YDR215C	Q12240	137 aa		5.06	□□□□□ -1.6
UBC1	YDR177W	SUL2	Q12325	893 aa		5.06	□□□□□ -1.6
UBC1	YDR177W	PCD1	Q12524	340 aa		5.06	□□□□□ -1.6
UBC1	YDR177W	HRP1	Q99383	534 aa	Known RBP	5.06	□□□□□ -1.6
UBC1	YDR177W	CYC7	P00045	113 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	GCD1	P09032	578 aa	Predicted RBP	5.05	□□□□□ -1.6
UBC1	YDR177W	TUP1	P16649	713 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	PRP4	P20053	465 aa	Known RBP	5.05	□□□□□ -1.6
UBC1	YDR177W	YCK1	P23291	538 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	PRP28	P23394	588 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	ORC2	P32833	620 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	UBP11	P36026	717 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
UBC1	YDR177W	YIL077C	P40508	320 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	YIR042C	P40586	236 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	SSU1	P41930	458 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	YDL183C	P48569	320 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	DSD1	P53095	428 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	YGR130C	P53278	816 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	NSG2	P53898	299 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	ZDS2	P54786	942 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	ROT1	Q03691	256 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	ATG23	Q06671	453 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	YFT2	Q06676	274 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	TMA16	Q08687	178 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	YDL176W	Q12027	708 aa		5.05	□□□□□ -1.6
UBC1	YDR177W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.04	□□□□□ -1.6	not detected
UBC1	YDR177W	PDE1	P22434	369 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	ERG8	P24521	451 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	CAD1	P24813	409 aa	Known RBP	5.04	□□□□□ -1.6
UBC1	YDR177W	EMC1	P25574	760 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	MDL1	P33310	695 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	ALY1	P36117	915 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	AGP2	P38090	596 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	EHT1	P38295	451 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	STB5	P38699	743 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	OTU2	P38747	307 aa	Known RBP	5.04	□□□□□ -1.6
UBC1	YDR177W	YJL206C	P39529	758 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	NUP60	P39705	539 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	SLZ1	P40167	298 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	LRO1	P40345	661 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	YIL166C	P40445	542 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	LSB3	P43603	459 aa	Known RBP	5.04	□□□□□ -1.6
UBC1	YDR177W	YJL055W	P47044	245 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	GCV2	P49095	1034 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	RIM20	Q12033	661 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	SWT1	Q12104	458 aa		5.04	□□□□□ -1.6
UBC1	YDR177W	PGA3	Q12746	312 aa	Known RBP	5.04	□□□□□ -1.6
UBC1	YDR177W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
UBC1	YDR177W	MET3	P08536	511 aa		5.03	□□□□□ -1.6
UBC1	YDR177W	LAT1	P12695	482 aa	Known RBP	5.03	□□□□□ -1.6
UBC1	YDR177W	FEN2	P25621	512 aa	Known RBP	5.03	□□□□□ -1.6
UBC1	YDR177W	ECM32	P32644	1121 aa	Known RBP	5.03	□□□□□ -1.6
UBC1	YDR177W	APE3	P37302	537 aa	Known RBP	5.03	□□□□□ -1.6
UBC1	YDR177W	RXT2	P38255	430 aa		5.03	□□□□□ -1.6
UBC1	YDR177W	TOS1	P38288	455 aa		5.03	□□□□□ -1.6
UBC1	YDR177W	ETP1	P38748	585 aa	Known RBP	5.03	□□□□□ -1.6
UBC1	YDR177W	GDI1	P39958	451 aa	Known RBP	5.03	□□□□□ -1.6
UBC1	YDR177W	GET2	P40056	285 aa		5.03	□□□□□ -1.6
UBC1	YDR177W	CTH1	P47976	325 aa		5.03	□□□□□ -1.6
UBC1	YDR177W	GLO1	P50107	326 aa		5.03	□□□□□ -1.6
UBC1	YDR177W	OCA1	P50946	238 aa	Predicted RBP	5.03	□□□□□ -1.6
UBC1	YDR177W	VPS62	P53285	467 aa		5.03	□□□□□ -1.6
UBC1	YDR177W	HOF1	Q05080	669 aa		5.03	□□□□□ -1.6
UBC1	YDR177W	FRE5	Q08908	694 aa		5.03	□□□□□ -1.6
UBC1	YDR177W	GET3	Q12154	354 aa	Known RBP	5.03	□□□□□ -1.6
UBC1	YDR177W	YPR053C	Q6Q5F3	151 aa		5.03	□□□□□ -1.6
UBC1	YDR177W	VCX1	Q99385	411 aa		5.03	□□□□□ -1.6
UBC1	YDR177W	CYB2	P00175	591 aa		5.02	□□□□□ -1.61
UBC1	YDR177W	TPM1	P17536	199 aa	Known RBP	5.02	□□□□□ -1.61
UBC1	YDR177W	CAP1	P28495	268 aa	Known RBP	5.02	□□□□□ -1.61
UBC1	YDR177W	BRF1	P29056	596 aa		5.02	□□□□□ -1.61
UBC1	YDR177W	PRE2	P30656	287 aa	Known RBP	5.02	□□□□□ -1.61
UBC1	YDR177W	TMN3	P40071	706 aa		5.02	□□□□□ -1.61
UBC1	YDR177W	COS12	P53053	380 aa		5.02	□□□□□ -1.61
UBC1	YDR177W	ART5	P53244	586 aa	Known RBP	5.02	□□□□□ -1.61
UBC1	YDR177W	YPL034W	Q03083	165 aa		5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms