RNA–Protein interactions for RNA: YCR054C

CTR86, Transcript of Essential protein of unknown function, yeast

Gene CTR86, Length 1,692 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR86	YCR054C	GRX6	Q12438	231 aa		4.28	□□□□□ -1.72
CTR86	YCR054C	PAR32	Q12515	295 aa	Known RBP	4.28	□□□□□ -1.72
CTR86	YCR054C	STE14	P32584	239 aa		4.27	□□□□□ -1.73
CTR86	YCR054C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
CTR86	YCR054C	FTR1	P40088	404 aa		4.27	□□□□□ -1.73
CTR86	YCR054C	YNL195C	P40168	261 aa		4.27	□□□□□ -1.73
CTR86	YCR054C	SSU1	P41930	458 aa		4.27	□□□□□ -1.73
CTR86	YCR054C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
CTR86	YCR054C	YFR016C	P43597	1233 aa	Known RBP	4.27	□□□□□ -1.73
CTR86	YCR054C	ROK1	P45818	564 aa	Predicted RBP	4.27	□□□□□ -1.73
CTR86	YCR054C	YJL055W	P47044	245 aa		4.27	□□□□□ -1.73
CTR86	YCR054C	NOP9	P47077	666 aa	Known RBP	4.27	□□□□□ -1.73
CTR86	YCR054C	YDL183C	P48569	320 aa		4.27	□□□□□ -1.73
CTR86	YCR054C	PIL1	P53252	339 aa	Known RBP	4.27	□□□□□ -1.73
CTR86	YCR054C	FDC1	Q03034	503 aa		4.27	□□□□□ -1.73
CTR86	YCR054C	WHI4	Q07655	649 aa	Known RBP	4.27	□□□□□ -1.73
CTR86	YCR054C	CPA2	P03965	1118 aa	Known RBP	4.26	□□□□□ -1.73
CTR86	YCR054C	REC107	P21651	314 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	TRX1	P22217	103 aa	Known RBP	4.26	□□□□□ -1.73
CTR86	YCR054C	ERG8	P24521	451 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	UBP11	P36026	717 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	APE3	P37302	537 aa	Known RBP	4.26	□□□□□ -1.73
CTR86	YCR054C	CRG1	P38892	291 aa	RIP-Chip data	4.26	□□□□□ -1.73	RIP-Chip
CTR86	YCR054C	RTS1	P38903	757 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	GLO1	P50107	326 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	SGF73	P53165	657 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	ART5	P53244	586 aa	Known RBP	4.26	□□□□□ -1.73
CTR86	YCR054C	YNR014W	P53719	212 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	MUB1	Q03162	620 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	NGL3	Q03210	505 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	ECM22	Q05958	814 aa	Predicted RBP	4.26	□□□□□ -1.73
CTR86	YCR054C	TPO1	Q07824	586 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	RIM20	Q12033	661 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	VCX1	Q99385	411 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	TUB3	P09734	445 aa	Known RBP	4.26	□□□□□ -1.73
CTR86	YCR054C	EFT1	P32324	842 aa	Known RBP	4.26	□□□□□ -1.73
CTR86	YCR054C	DCG1	P32460	244 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	GCS1	P35197	352 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	KES1	P35844	434 aa	Known RBP	4.26	□□□□□ -1.73
CTR86	YCR054C	ALY1	P36117	915 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	KTR3	P38130	404 aa	Predicted RBP	4.26	□□□□□ -1.73
CTR86	YCR054C	REG2	P38232	338 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	SMF1	P38925	575 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	PSD1	P39006	500 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	AKR1	P39010	764 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	SLZ1	P40167	298 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	RGI2	P40188	164 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	LTP1	P40347	161 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	YIL161W	P40449	235 aa	Known RBP	4.26	□□□□□ -1.73
CTR86	YCR054C	MET18	P40469	1032 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	SAE2	P46946	345 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	YGR066C	P53242	292 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	JJJ1	P53863	590 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	VTI1	Q04338	217 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	ERB1	Q04660	807 aa	Known RBP	4.26	□□□□□ -1.73
CTR86	YCR054C	AIM32	Q04689	311 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	GAD1	Q04792	585 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	TMA16	Q08687	178 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	TGL5	Q12043	749 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	ECM3	Q99252	613 aa		4.26	□□□□□ -1.73
CTR86	YCR054C	TY1B-A	O13527	1196 aa	Known RBP	4.25	□□□□□ -1.73
CTR86	YCR054C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
CTR86	YCR054C	CHS2	P14180	963 aa		4.25	□□□□□ -1.73
CTR86	YCR054C	VPS33	P20795	691 aa		4.25	□□□□□ -1.73
CTR86	YCR054C	MSB1	P21339	1137 aa	Known RBP	4.25	□□□□□ -1.73
CTR86	YCR054C	SEC21	P32074	935 aa	Known RBP	4.25	□□□□□ -1.73
CTR86	YCR054C	STB6	P36085	766 aa		4.25	□□□□□ -1.73
CTR86	YCR054C	RRF1	P38771	230 aa		4.25	□□□□□ -1.73
CTR86	YCR054C	LYS9	P38999	446 aa		4.25	□□□□□ -1.73
CTR86	YCR054C	MET12	P46151	657 aa		4.25	□□□□□ -1.73
CTR86	YCR054C	IDS2	P46958	469 aa		4.25	□□□□□ -1.73
CTR86	YCR054C	NRG1	Q03125	231 aa		4.25	□□□□□ -1.73
CTR86	YCR054C	SSY1	Q03770	852 aa		4.25	□□□□□ -1.73
CTR86	YCR054C	CTK1	Q03957	528 aa	Known RBP	4.25	□□□□□ -1.73
CTR86	YCR054C	RRP9	Q06506	573 aa	Known RBP	4.25	□□□□□ -1.73
CTR86	YCR054C	YJR112W-A	Q3E743	109 aa		4.25	□□□□□ -1.73
CTR86	YCR054C	GAL10	P04397	699 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	PRP4	P20053	465 aa	Known RBP	4.24	□□□□□ -1.73
CTR86	YCR054C	PEX1	P24004	1043 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	CLB1	P24868	471 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	CAP1	P28495	268 aa	Known RBP	4.24	□□□□□ -1.73
CTR86	YCR054C	SWH1	P35845	1188 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	SRO77	P38163	1010 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	MSS4	P38994	779 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	YJL193W	P39542	402 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	PFK26	P40433	827 aa	Known RBP	4.24	□□□□□ -1.73
CTR86	YCR054C	MET28	P40573	187 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	LCB2	P40970	561 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	EOS1	P53938	366 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	SEC5	P89102	971 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	OAZ1	Q02803	292 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	MTG1	Q03151	367 aa	Predicted RBP	4.24	□□□□□ -1.73
CTR86	YCR054C	NGL2	Q03264	515 aa	Known RBP	4.24	□□□□□ -1.73
CTR86	YCR054C	PRP42	Q03776	544 aa	Known RBP	4.24	□□□□□ -1.73
CTR86	YCR054C	SKG3	Q06315	1026 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	RIX7	Q07844	837 aa	Known RBP	4.24	□□□□□ -1.73
CTR86	YCR054C	CUE5	Q08412	411 aa	Known RBP	4.24	□□□□□ -1.73
CTR86	YCR054C	TCO89	Q08921	799 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	SKS1	Q12505	502 aa		4.24	□□□□□ -1.73
CTR86	YCR054C	YRF1-4	O13559	1382 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms