RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Gm12845A0A0N4SUM5 588 aa11.33□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Scgb1b24B1B0N6 92 aa11.33□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Tcrg-C3L7N479 172 aa11.33□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 P03985 172 aa11.33□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Cdkn1aP39689 159 aa11.33□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Sumo2P61957 95 aaKnown RBP11.33□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Obp2aQ8K1H9 176 aa11.33□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Igkv4-90A0A075B5L3 117 aa11.32□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Tmem30bQ8BHG3 353 aa11.32□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Ighv1-53A0A075B5W3 117 aa11.31□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Igkv4-71A0A0G2JEH0 117 aa11.31□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 P01812 117 aa11.31□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Tmem170bP86050 132 aa11.31□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Zfhx4Q9JJN2 3550 aa11.31□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Igkv4-59A0A0B4J1I8 117 aa11.31□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 P01725 110 aa11.31□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Ubald2Q8BQH4 164 aa11.31□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Foxi1Q922I5 372 aa11.31□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Tmem14cQ9CQN6 114 aa11.31□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Gkn1Q9CR36 201 aa11.31□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Gemin7Q9CWY4 129 aa11.31□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Col6a6Q8C6K9 2265 aa11.31□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Ighv1-31A0A0A6YWK5 117 aa11.3□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 1700056E22RikF7CNM6 234 aa11.3□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Gm20481G3UXK4 153 aa11.3□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Ube2d3P61079 147 aa11.3□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Ube2d2P62838 147 aa11.3□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Map1bP14873 2464 aaKnown RBP11.3□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Obp2bA2BHR0 176 aa11.3□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 TshbP12656 138 aa11.3□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Svs5P30933 122 aa11.3□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 TgfaP48030 159 aa11.3□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Gm1553Q66VB7 94 aa11.3□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Psmb11Q8BG41 302 aa11.29□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 A130051J06RikQ8CAU1 227 aa11.29□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Ighv14-1A0A075B5R4 117 aa11.29□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Ighv3-4A0A0A6YXF1 117 aa11.29□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Gm42674D3YUT9 64 aa11.29□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Srp14P16254 110 aaKnown RBP11.29□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Minos1Q7TNS2 76 aa11.29□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Q9D8Q6 235 aa11.29□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Lynx1P0DP60 116 aa11.28□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Ss18Q62280 418 aa11.28□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Hif1anQ8BLR9 349 aa11.28□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Myo15bI7HPW8 3033 aa11.28□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Gm10036E9PYL9 178 aaKnown RBP11.28□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 S100a4P07091 101 aa11.28□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Sdhaf1Q3U276 118 aa11.28□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Olfr313Q5NC55 308 aa11.28□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Dpm2Q9Z324 84 aa11.28□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Gm6812B1AXU1 112 aa11.27□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Gm2174F6ZVF2 133 aa11.27□□□□□ -0.6
Ushbp1-201ENSMUST00000049184 Cacna1hO88427 2365 aa11.27□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 4930447F04RikA2AFR2 126 aa11.27□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 SrarpQ3ULG3 163 aa11.27□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Mrpl36Q99N90 102 aa11.27□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Gm5629P06327 117 aa11.26□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Fhl1P97447 280 aaKnown RBP11.26□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Fam24aQ8CF27 98 aa11.26□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Wfdc15bQ9JHY4 80 aa11.26□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Igkv4-57A0A0A6YYE7 117 aa11.26□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Mrps21P58059 87 aa11.26□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Spata46Q4FZF2 204 aa11.26□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Q9CX25 107 aa11.26□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Prrc2aQ7TSC1 2158 aaKnown RBP11.25□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Gm10271F6WY25 52 aa11.25□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Il1f10Q8R459 152 aa11.25□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Tac4Q99N14 128 aa11.25□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Nav2E9Q842 2432 aa11.25□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Trav4n-4A0A075B615 110 aa11.25□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Cysltr1Q99JA4 352 aa11.25□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Piezo1E2JF22 2547 aa11.24□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Lgals6O54891 301 aa11.24□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 P01724 129 aa11.24□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 P01727 129 aa11.24□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Ighv1-62-3P01754 117 aa11.24□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Tex26Q0VB26 296 aa11.24□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Smrp1Q2MH31 260 aa11.24□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Spink6Q8BT20 105 aa11.24□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Gpr82Q8BZR0 328 aa11.24□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Prr13Q9CQJ5 137 aa11.24□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Triap1Q9D8Z2 76 aa11.24□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Map1aQ9QYR6 2776 aa11.24□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 P01802 115 aa11.24□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Ighv3-1A0A075B5S6 116 aa11.23□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Ighv12-3A0A075B5T1 117 aa11.23□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Rpl36-ps4A0A140T8U4 117 aa11.23□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Gm17727E9Q4V7 109 aa11.23□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Ly6lH3BJG9 140 aa11.23□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Foxi2Q3I5G5 311 aa11.23□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Zfand3Q497H0 227 aa11.23□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Atp6v0e1Q9CQD8 81 aa11.23□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Ighv1-80A0A075B5Y3 117 aa11.23□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Ighv1-9A0A0A6YW37 117 aa11.23□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Igkv2-137A0A0B4J1H6 120 aa11.23□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Zfp248Q640N4 576 aa11.23□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Ccl24Q9JKC0 119 aa11.23□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Mrps12O35680 139 aa11.22□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Ang2Q64438 145 aa11.22□□□□□ -0.61
Ushbp1-201ENSMUST00000049184 Parm1Q923D3 296 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 59.5 ms