RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Gm16223Q8CBM3 117 aa11.4□□□□□ -0.58
Nup54-201ENSMUST00000038514 P18527 97 aa11.39□□□□□ -0.59
Nup54-201ENSMUST00000038514 Edn3P48299 214 aa11.39□□□□□ -0.59
Nup54-201ENSMUST00000038514 Ndufa4Q62425 82 aaKnown RBP11.39□□□□□ -0.59
Nup54-201ENSMUST00000038514 Hrct1Q9D6B9 109 aa11.39□□□□□ -0.59
Nup54-201ENSMUST00000038514 Q9DAB9 146 aa11.39□□□□□ -0.59
Nup54-201ENSMUST00000038514 Prrc2cQ3TLH4 2846 aaKnown RBP11.39□□□□□ -0.59
Nup54-201ENSMUST00000038514 Esp4A8R0T8 117 aa11.38□□□□□ -0.59
Nup54-201ENSMUST00000038514 Sap30O88574 220 aa11.38□□□□□ -0.59
Nup54-201ENSMUST00000038514 Gkn1Q9CR36 201 aa11.38□□□□□ -0.59
Nup54-201ENSMUST00000038514 Mettl26Q9DCS2 204 aa11.38□□□□□ -0.59
Nup54-201ENSMUST00000038514 Slamf6Q9ET39 351 aa11.38□□□□□ -0.59
Nup54-201ENSMUST00000038514 Ighv1-80A0A075B5Y3 117 aa11.37□□□□□ -0.59
Nup54-201ENSMUST00000038514 Ighv1-9A0A0A6YW37 117 aa11.37□□□□□ -0.59
Nup54-201ENSMUST00000038514 Igkv20-101-2A0A0G2JDU3 113 aa11.37□□□□□ -0.59
Nup54-201ENSMUST00000038514 4930447F04RikA2AFR2 126 aa11.37□□□□□ -0.59
Nup54-201ENSMUST00000038514 Sumo2P61957 95 aaKnown RBP11.37□□□□□ -0.59
Nup54-201ENSMUST00000038514 Olfr312Q7TRZ9 308 aa11.37□□□□□ -0.59
Nup54-201ENSMUST00000038514 Ormdl2Q9CQZ0 153 aa11.37□□□□□ -0.59
Nup54-201ENSMUST00000038514 Ighv1-82A0A0G2JEU7 117 aa11.36□□□□□ -0.59
Nup54-201ENSMUST00000038514 Brd3osA0A1B0GRB6 84 aa11.36□□□□□ -0.59
Nup54-201ENSMUST00000038514 P01741 114 aa11.36□□□□□ -0.59
Nup54-201ENSMUST00000038514 Ang5Q5GAN1 145 aa11.36□□□□□ -0.59
Nup54-201ENSMUST00000038514 Arhgap32Q811P8 2089 aa11.36□□□□□ -0.59
Nup54-201ENSMUST00000038514 Smr3aQ61900 147 aa11.36□□□□□ -0.59
Nup54-201ENSMUST00000038514 Gm17334Q8C6U3 126 aa11.36□□□□□ -0.59
Nup54-201ENSMUST00000038514 Tctex1d4Q8CDY7 219 aa11.36□□□□□ -0.59
Nup54-201ENSMUST00000038514 Mustn1Q99JI1 82 aa11.36□□□□□ -0.59
Nup54-201ENSMUST00000038514 Mrpl36Q99N90 102 aa11.36□□□□□ -0.59
Nup54-201ENSMUST00000038514 Q9CX63 252 aa11.36□□□□□ -0.59
Nup54-201ENSMUST00000038514 Tmem219Q9D123 240 aa11.36□□□□□ -0.59
Nup54-201ENSMUST00000038514 Dpm3Q9D1Q4 92 aa11.36□□□□□ -0.59
Nup54-201ENSMUST00000038514 Vamp8O70404 101 aa11.35□□□□□ -0.59
Nup54-201ENSMUST00000038514 P01724 129 aa11.35□□□□□ -0.59
Nup54-201ENSMUST00000038514 P01727 129 aa11.35□□□□□ -0.59
Nup54-201ENSMUST00000038514 Spink13Q3UTS8 97 aa11.35□□□□□ -0.59
Nup54-201ENSMUST00000038514 Defb45Q3V490 66 aa11.35□□□□□ -0.59
Nup54-201ENSMUST00000038514 Igkv4-57-1A0A075B5M4 119 aa11.35□□□□□ -0.59
Nup54-201ENSMUST00000038514 S100a4P07091 101 aa11.35□□□□□ -0.59
Nup54-201ENSMUST00000038514 Lmo4P61969 165 aa11.35□□□□□ -0.59
Nup54-201ENSMUST00000038514 Tex26Q0VB26 296 aa11.35□□□□□ -0.59
Nup54-201ENSMUST00000038514 Defa26Q3L180 93 aa11.35□□□□□ -0.59
Nup54-201ENSMUST00000038514 Dopey2Q3UHQ6 2295 aa11.35□□□□□ -0.59
Nup54-201ENSMUST00000038514 Ighv12-3A0A075B5T1 117 aa11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 P01837 106 aa11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 Hint1P70349 126 aaKnown RBP11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 Q4KKZ1 196 aa11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 Prr9Q8BV84 116 aa11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 Atp6v0bQ91V37 205 aa11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 Rbmxl2Q9DAE2 385 aaKnown RBP11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 Tcf24V9GWT9 166 aa11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 Ighv5-8A0A075B676 92 aa11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 Gm12845A0A0N4SUM5 588 aa11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 Gm17430F6RSK3 157 aa11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 Sdhaf1Q3U276 118 aa11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 Ss18Q62280 418 aa11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 Arl3Q9WUL7 182 aa11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 Abca4O35600 2310 aa11.34□□□□□ -0.59
Nup54-201ENSMUST00000038514 Ighv1-75A0A075B5Y2 117 aa11.33□□□□□ -0.6
Nup54-201ENSMUST00000038514 AamdcQ8R0P4 122 aa11.33□□□□□ -0.6
Nup54-201ENSMUST00000038514 Prss29Q99MS4 279 aa11.33□□□□□ -0.6
Nup54-201ENSMUST00000038514 Gm44965A0A0N4SVR3 59 aa11.33□□□□□ -0.6
Nup54-201ENSMUST00000038514 Defa37K9J724 93 aa11.33□□□□□ -0.6
Nup54-201ENSMUST00000038514 Defa5P28312 93 aa11.33□□□□□ -0.6
Nup54-201ENSMUST00000038514 Cks1brtQ3UNC9 96 aa11.33□□□□□ -0.6
Nup54-201ENSMUST00000038514 Mob4Q6PEB6 225 aa11.33□□□□□ -0.6
Nup54-201ENSMUST00000038514 Ovol2Q8CIV7 274 aa11.33□□□□□ -0.6
Nup54-201ENSMUST00000038514 SNORCQ9CXL7 121 aa11.33□□□□□ -0.6
Nup54-201ENSMUST00000038514 Cox8cA6H666 72 aa11.32□□□□□ -0.6
Nup54-201ENSMUST00000038514 Gm15557A6PWY0 234 aa11.32□□□□□ -0.6
Nup54-201ENSMUST00000038514 Gm5629P06327 117 aa11.32□□□□□ -0.6
Nup54-201ENSMUST00000038514 Gm10295Q8CCF3 114 aa11.32□□□□□ -0.6
Nup54-201ENSMUST00000038514 Ubtd1Q91WB7 227 aa11.32□□□□□ -0.6
Nup54-201ENSMUST00000038514 Pradc1Q9D9N8 188 aa11.32□□□□□ -0.6
Nup54-201ENSMUST00000038514 Trav8-1A0A075B641 109 aa11.31□□□□□ -0.6
Nup54-201ENSMUST00000038514 Ighv3-3A0A0A6YWL2 116 aa11.31□□□□□ -0.6
Nup54-201ENSMUST00000038514 A730046J19RikA0A1B0GSN8 89 aa11.31□□□□□ -0.6
Nup54-201ENSMUST00000038514 Mrps12O35680 139 aa11.31□□□□□ -0.6
Nup54-201ENSMUST00000038514 Ptprz1B9EKR1 2312 aa11.31□□□□□ -0.6
Nup54-201ENSMUST00000038514 Sdk1Q3UH53 2193 aa11.31□□□□□ -0.6
Nup54-201ENSMUST00000038514 Lama5Q61001 3718 aa11.31□□□□□ -0.6
Nup54-201ENSMUST00000038514 Lce6aD3YV94 81 aa11.31□□□□□ -0.6
Nup54-201ENSMUST00000038514 Tcte2E9PY37 120 aa11.31□□□□□ -0.6
Nup54-201ENSMUST00000038514 P01739 132 aa11.31□□□□□ -0.6
Nup54-201ENSMUST00000038514 P01820 115 aa11.31□□□□□ -0.6
Nup54-201ENSMUST00000038514 Csn3P06796 181 aa11.31□□□□□ -0.6
Nup54-201ENSMUST00000038514 Tcrg-C3L7N479 172 aa11.3□□□□□ -0.6
Nup54-201ENSMUST00000038514 Ccl25O35903 144 aa11.3□□□□□ -0.6
Nup54-201ENSMUST00000038514 Sigmar1O55242 223 aa11.3□□□□□ -0.6
Nup54-201ENSMUST00000038514 P01812 117 aa11.3□□□□□ -0.6
Nup54-201ENSMUST00000038514 P03985 172 aa11.3□□□□□ -0.6
Nup54-201ENSMUST00000038514 Olfr313Q5NC55 308 aa11.3□□□□□ -0.6
Nup54-201ENSMUST00000038514 Fam222aQ6PGH4 453 aa11.3□□□□□ -0.6
Nup54-201ENSMUST00000038514 Fam240aJ3QNP9 97 aa11.3□□□□□ -0.6
Nup54-201ENSMUST00000038514 Lgals6O54891 301 aa11.3□□□□□ -0.6
Nup54-201ENSMUST00000038514 P01747 120 aa11.3□□□□□ -0.6
Nup54-201ENSMUST00000038514 Defb33Q30KN3 62 aa11.3□□□□□ -0.6
Nup54-201ENSMUST00000038514 Gpr82Q8BZR0 328 aa11.3□□□□□ -0.6
Nup54-201ENSMUST00000038514 Ndufa11Q9D8B4 141 aa11.3□□□□□ -0.6
Nup54-201ENSMUST00000038514 Sh3bgrl2Q8BG73 107 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 68.4 ms