RNA–Protein interactions for RNA: ENSMUST00000021956.8

Ddx41-201, Transcript of Probable ATP-dependent RNA helicase DDX41, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx41, Length 2,205 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41-201ENSMUST00000021956 Ighv3-4A0A0A6YXF1 117 aa13.79□□□□□ -0.2
Ddx41-201ENSMUST00000021956 P18527 97 aa13.79□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Ccl6P27784 116 aa13.79□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Olfr312Q7TRZ9 308 aa13.79□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Tmem14cQ9CQN6 114 aa13.79□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Pgpep1Q9ESW8 209 aa13.79□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Gm28269A0A087WSG3 125 aa13.79□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Igkv4-71A0A0G2JEH0 117 aa13.79□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Trav7-2Q5R1I3 112 aa13.79□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Q9CX25 107 aa13.79□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Abca1P41233 2261 aa13.79□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Ighv3-1A0A075B5S6 116 aa13.78□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Ighv1-22A0A075B5U7 117 aa13.78□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Trav21-dv12A0A075B6C4 109 aa13.78□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Gm12845A0A0N4SUM5 588 aa13.78□□□□□ -0.2
Ddx41-201ENSMUST00000021956 1700056E22RikF7CNM6 234 aa13.78□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Fam240aJ3QNP9 97 aa13.78□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Sdhaf1Q3U276 118 aa13.78□□□□□ -0.2
Ddx41-201ENSMUST00000021956 ElaneQ3UP87 265 aa13.78□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Khdc1cQ4KL78 166 aa13.78□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Nit2Q9JHW2 276 aa13.78□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Plac1Q9JI83 173 aa13.78□□□□□ -0.2
Ddx41-201ENSMUST00000021956 Brd3osA0A1B0GRB6 84 aa13.77□□□□□ -0.21
Ddx41-201ENSMUST00000021956 P01725 110 aa13.77□□□□□ -0.21
Ddx41-201ENSMUST00000021956 P01812 117 aa13.77□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Sumo2P61957 95 aaKnown RBP13.77□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Runx1Q03347 451 aa13.77□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Sec16aA2AIX1 2377 aa13.77□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Ankrd11E9Q4F7 2643 aa13.77□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Prok1Q14A28 105 aa13.76□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Csmd1Q923L3 3564 aa13.76□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Gm44965A0A0N4SVR3 59 aa13.76□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Gm45785A0A1B0GT05 94 aa13.76□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Ube2d1P61080 147 aaKnown RBP13.76□□□□□ -0.21
Ddx41-201ENSMUST00000021956 NrepQ07475 68 aa13.76□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Gm4763Q8CFJ5 196 aa13.76□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Pradc1Q9D9N8 188 aa13.76□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Pla2g2dQ9WVF6 144 aa13.76□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Ighv8-5A0A0A6YY60 119 aa13.75□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Igkv4-57A0A0A6YYE7 117 aa13.75□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Csn3P06796 181 aa13.75□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Usp24B1AY13 2617 aaKnown RBP13.75□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Tln1P26039 2541 aaKnown RBP13.75□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Klhdc1Q80YG3 406 aa13.75□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Prss41Q920S2 322 aa13.75□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Ighv12-3A0A075B5T1 117 aa13.74□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Lgals6O54891 301 aa13.74□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Zfand3Q497H0 227 aa13.74□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Gm16223Q8CBM3 117 aa13.74□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Map1aQ9QYR6 2776 aa13.74□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Tcrg-C3L7N479 172 aa13.74□□□□□ -0.21
Ddx41-201ENSMUST00000021956 P03985 172 aa13.74□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Uqcrfs1Q9CR68 274 aa13.74□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Cdip1Q9DB75 208 aa13.74□□□□□ -0.21
Ddx41-201ENSMUST00000021956 AtrxQ61687 2476 aaKnown RBP13.73□□□□□ -0.21
Ddx41-201ENSMUST00000021956 MdfiP70331 251 aa13.72□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Gm21370Q3T9V6 190 aa13.72□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Srsf9Q9D0B0 222 aaKnown RBP13.72□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Gm45753A0A1C7CYU8 86 aa13.72□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Lce6aD3YV94 81 aa13.72□□□□□ -0.21
Ddx41-201ENSMUST00000021956 PolP10400 120 aa13.72□□□□□ -0.21
Ddx41-201ENSMUST00000021956 TshbP12656 138 aa13.72□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Ube2d3P61079 147 aa13.72□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Ube2d2P62838 147 aa13.72□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Gemin7Q9CWY4 129 aa13.72□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Tspan13Q9D8C2 204 aa13.72□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Ptprz1B9EKR1 2312 aa13.72□□□□□ -0.21
Ddx41-201ENSMUST00000021956 NbasE9Q411 2356 aa13.71□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Trav4n-4A0A075B615 110 aa13.71□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Rpl36-ps4A0A140T8U4 117 aa13.71□□□□□ -0.21
Ddx41-201ENSMUST00000021956 4930447F04RikA2AFR2 126 aa13.71□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Cfc1P97766 202 aa13.71□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Sh3bgrl2Q8BG73 107 aa13.71□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Gkn1Q9CR36 201 aa13.71□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Rs1Q9Z1L4 224 aa13.71□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Dpm2Q9Z324 84 aa13.71□□□□□ -0.21
Ddx41-201ENSMUST00000021956 Tmem170bP86050 132 aa13.71□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Q9D8Q6 235 aa13.71□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Gm6812B1AXU1 112 aa13.7□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Nsun4C4P6S0 806 aaKnown RBP13.7□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Zzef1Q5SSH7 2924 aa13.7□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Ighv1-80A0A075B5Y3 117 aa13.7□□□□□ -0.22
Ddx41-201ENSMUST00000021956 S100a4P07091 101 aa13.7□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Fhl1P97447 280 aaKnown RBP13.7□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Olfr313Q5NC55 308 aa13.7□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Foxi1Q922I5 372 aa13.7□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Atp6v0e1Q9CQD8 81 aa13.7□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Gm5629P06327 117 aa13.69□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Ss18Q62280 418 aa13.69□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Zfp248Q640N4 576 aa13.69□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Spink6Q8BT20 105 aa13.69□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Obp2aQ8K1H9 176 aa13.69□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Stpg1Q9D2F5 341 aa13.69□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Prrc2aQ7TSC1 2158 aaKnown RBP13.69□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Ighv1-9A0A0A6YW37 117 aa13.68□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Ly6lH3BJG9 140 aa13.68□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Tac4Q99N14 128 aa13.68□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Mrpl36Q99N90 102 aa13.68□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Klk5Q9D140 293 aa13.68□□□□□ -0.22
Ddx41-201ENSMUST00000021956 Scgb1b24B1B0N6 92 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 73.9 ms