RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Gm10118Q8C8J5 116 aa10.91□□□□□ -0.66
Ssr1-204ENSMUST00000225319 QrfpQ8CE23 124 aa10.91□□□□□ -0.66
Ssr1-204ENSMUST00000225319 Trav6-6A0A075B603 114 aa10.91□□□□□ -0.66
Ssr1-204ENSMUST00000225319 Gm10521E9PZK0 135 aa10.91□□□□□ -0.66
Ssr1-204ENSMUST00000225319 Spock3Q8BKV0 436 aa10.91□□□□□ -0.66
Ssr1-204ENSMUST00000225319 A130051J06RikQ8CAU1 227 aa10.91□□□□□ -0.66
Ssr1-204ENSMUST00000225319 PpbpQ9EQI5 113 aa10.91□□□□□ -0.66
Ssr1-204ENSMUST00000225319 Nav3Q80TN7 2359 aa10.9□□□□□ -0.66
Ssr1-204ENSMUST00000225319 Ighv2-6A0A075B6A7 116 aa10.9□□□□□ -0.66
Ssr1-204ENSMUST00000225319 P01812 117 aa10.9□□□□□ -0.66
Ssr1-204ENSMUST00000225319 UrahQ9CRB3 118 aa10.9□□□□□ -0.66
Ssr1-204ENSMUST00000225319 Gcn1E9PVA8 2671 aaKnown RBP10.9□□□□□ -0.66
Ssr1-204ENSMUST00000225319 Q24JP4 165 aa10.89□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Gm5941Q497P9 117 aa10.89□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Olfr365Q8VFT2 312 aa10.89□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Tax1bp3Q9DBG9 124 aa10.89□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Ube2l6Q9QZU9 153 aa10.89□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Ighv1-53A0A075B5W3 117 aa10.88□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Trav14n-2A0A0G2JDF5 121 aa10.88□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Gm5878E9PUB3 99 aa10.88□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Trdv2-2Q5R1A4 116 aa10.88□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Cox7a2lQ61387 111 aa10.88□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Q9DAA3 117 aa10.88□□□□□ -0.67
Ssr1-204ENSMUST00000225319 AponG3X9D6 251 aa10.87□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Gm5426J3QNM7 103 aa10.87□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Crip3Q6Q6R3 243 aa10.87□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Gtsf1lQ9CWD0 151 aa10.87□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Wfdc15bQ9JHY4 80 aa10.87□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Epg5Q80TA9 2572 aa10.87□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Tenm3Q9WTS6 2715 aa10.87□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Rif1Q6PR54 2419 aaKnown RBP10.87□□□□□ -0.67
Ssr1-204ENSMUST00000225319 7420426K07RikQ3UX66 186 aa10.87□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Trpt1Q8K3A2 249 aa10.87□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Olfr1012Q8VFJ7 311 aa10.87□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Fmc1Q9CR13 113 aa10.87□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Klf13Q9JJZ6 289 aa10.87□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Gm15294V9GXA7 121 aa10.87□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Nf1Q04690 2841 aa10.86□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Trav6-4A0A075B6B4 115 aa10.86□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Ighv9-1A0A0B4J1P3 117 aa10.86□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Psmg4P0C7N9 123 aa10.86□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Cox8bP48772 70 aa10.86□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Ube2e2Q91W82 201 aa10.86□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Klk10Q99M20 278 aa10.86□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Card19Q9D1I2 183 aa10.86□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Sorl1O88307 2215 aaKnown RBP10.86□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Gm10036E9PYL9 178 aaKnown RBP10.85□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Ly86O88188 162 aa10.85□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Gm94Q3V2D2 93 aa10.85□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Hspe1Q64433 102 aaKnown RBP10.85□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Vsig8Q6P3A4 417 aa10.85□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Tctex1d1Q9D5I4 173 aa10.85□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Lamtor2Q9JHS3 125 aa10.85□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Ighv8-4A0A0A6YW26 117 aa10.84□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Esp38A8R0X1 80 aa10.84□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Nat8f4G5E8L3 226 aa10.84□□□□□ -0.67
Ssr1-204ENSMUST00000225319 H2-DMb1P35737 261 aa10.84□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Gm5464Q3UY29 175 aa10.84□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Cotl1Q9CQI6 142 aa10.84□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Trav6n-6A0A075B6B2 114 aa10.84□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Gm45623A0A1B0GSF6 103 aa10.84□□□□□ -0.67
Ssr1-204ENSMUST00000225319 P01791 123 aa10.84□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Olfr1437Q7TQR7 312 aa10.84□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Odf3l1Q810P2 275 aa10.84□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Krtap26-1Q9D7N2 215 aa10.84□□□□□ -0.67
Ssr1-204ENSMUST00000225319 Tmem160Q9D938 188 aa10.84□□□□□ -0.67
Ssr1-204ENSMUST00000225319 BsnO88737 3942 aa10.83□□□□□ -0.68
Ssr1-204ENSMUST00000225319 MtorQ9JLN9 2549 aa10.83□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Ighv1-23A0A0A6YVW3 117 aa10.83□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Gm8439G3UWA7 96 aa10.83□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Timm8bP62077 83 aaKnown RBP10.83□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Ndufa4l2Q4FZG9 87 aa10.83□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Foxc2Q61850 494 aa10.83□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Tomm6Q9CQN3 74 aa10.83□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Dpm3Q9D1Q4 92 aa10.83□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Vmn1r63Q9EPT1 300 aa10.83□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Rabac1Q9Z0S9 185 aa10.83□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Usp9yF8VPU6 2556 aa10.82□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Trav21-dv12A0A075B6C4 109 aa10.82□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Gm7849D3YX03 116 aa10.82□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Omt2bD3YX29 119 aa10.82□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Gm5105Q8C6Y9 112 aa10.82□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Map1lc3aQ91VR7 121 aa10.82□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Rnf185Q91YT2 192 aa10.82□□□□□ -0.68
Ssr1-204ENSMUST00000225319 RhohQ9D3G9 191 aa10.82□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Gm765B2RVL9 189 aa10.81□□□□□ -0.68
Ssr1-204ENSMUST00000225319 P01756 117 aa10.81□□□□□ -0.68
Ssr1-204ENSMUST00000225319 P01757 117 aa10.81□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Hoxd3P09027 433 aa10.81□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Defb26Q30KN7 186 aa10.81□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Khdc1aQ3UWR2 166 aa10.81□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Rchy1Q9CR50 261 aa10.81□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Npc2Q9Z0J0 149 aa10.81□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Igkv4-57-1A0A075B5M4 119 aa10.8□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Ighv1-80A0A075B5Y3 117 aa10.8□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Psmb11Q8BG41 302 aa10.8□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Mrpl20Q9CQL4 149 aa10.8□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Ufc1Q9CR09 167 aa10.8□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Ighv1-52A0A0A6YXC3 117 aa10.8□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Trav19A0A0B4J1K4 119 aa10.8□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms