RNA–Protein interactions for RNA: ENST00000640523.1

KCNMA1-283, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-283ENST00000640523 HUWE1Q7Z6Z7 4374 aaKnown RBP9.56□□□□□ -0.88
KCNMA1-283ENST00000640523 CSMD3Q7Z407 3707 aa9.46□□□□□ -0.9
KCNMA1-283ENST00000640523 AKAP9Q99996 3911 aa9.37□□□□□ -0.91
KCNMA1-283ENST00000640523 KRTAP10-5P60370 271 aa9.32□□□□□ -0.92
KCNMA1-283ENST00000640523 KRTAP8-1Q8IUC2 63 aa9.23□□□□□ -0.93
KCNMA1-283ENST00000640523 DNAH5Q8TE73 4624 aa9.17□□□□□ -0.94
KCNMA1-283ENST00000640523 DNAH10Q8IVF4 4471 aa9.16□□□□□ -0.94
KCNMA1-283ENST00000640523 ALMS1Q8TCU4 4167 aa9.11□□□□□ -0.95
KCNMA1-283ENST00000640523 DNAH11Q96DT5 4516 aa9.11□□□□□ -0.95
KCNMA1-283ENST00000640523 DNAH9Q9NYC9 4486 aa9.09□□□□□ -0.95
KCNMA1-283ENST00000640523 KRTAP4-1Q9BYQ7 146 aa9.06□□□□□ -0.96
KCNMA1-283ENST00000640523 SPRR2GQ9BYE4 73 aa9.01□□□□□ -0.97
KCNMA1-283ENST00000640523 PLECQ15149 4684 aaKnown RBP9□□□□□ -0.97
KCNMA1-283ENST00000640523 FAT1Q14517 4588 aa9□□□□□ -0.97
KCNMA1-283ENST00000640523 DNAH1Q9P2D7 4330 aa8.97□□□□□ -0.97
KCNMA1-283ENST00000640523 DNAH2Q9P225 4427 aa8.94□□□□□ -0.98
KCNMA1-283ENST00000640523 MT1HP80294 61 aa8.89□□□□□ -0.99
KCNMA1-283ENST00000640523 MT2AP02795 61 aa8.84□□□□□ -0.99
KCNMA1-283ENST00000640523 DNAH17Q9UFH2 4485 aa8.8□□□□□ -1
KCNMA1-283ENST00000640523 DNAH8Q96JB1 4490 aa8.79□□□□□ -1
KCNMA1-283ENST00000640523 LCE3CQ5T5A8 94 aa8.74□□□□□ -1.01
KCNMA1-283ENST00000640523 KRTAP19-5Q3LI72 72 aa8.71□□□□□ -1.02
KCNMA1-283ENST00000640523 VPS13DQ5THJ4 4388 aa8.69□□□□□ -1.02
KCNMA1-283ENST00000640523 MT1FP04733 61 aa8.64□□□□□ -1.03
KCNMA1-283ENST00000640523 DYNC1H1Q14204 4646 aaKnown RBP8.6□□□□□ -1.03
KCNMA1-283ENST00000640523 KRTAP19-4Q3LI73 84 aa8.59□□□□□ -1.03
KCNMA1-283ENST00000640523 DNHD1Q96M86 4753 aa8.59□□□□□ -1.03
KCNMA1-283ENST00000640523 SPRR2FQ96RM1 72 aa8.56□□□□□ -1.04
KCNMA1-283ENST00000640523 STARD9Q9P2P6 4700 aa8.55□□□□□ -1.04
KCNMA1-283ENST00000640523 KRTAP10-7P60409 375 aaPredicted RBP8.54□□□□□ -1.04
KCNMA1-283ENST00000640523 SACSQ9NZJ4 4579 aa8.53□□□□□ -1.04
KCNMA1-283ENST00000640523 LRP1BQ9NZR2 4599 aa8.51□□□□□ -1.05
KCNMA1-283ENST00000640523 DNAH3Q8TD57 4116 aa8.49□□□□□ -1.05
KCNMA1-283ENST00000640523 RYR1P21817 5038 aa8.4□□□□□ -1.06
KCNMA1-283ENST00000640523 SPRR5A0A1B0GTR4 108 aa8.38□□□□□ -1.07
KCNMA1-283ENST00000640523 PRKDCP78527 4128 aaKnown RBP8.37□□□□□ -1.07
KCNMA1-283ENST00000640523 APOBP04114 4563 aaKnown RBP8.37□□□□□ -1.07
KCNMA1-283ENST00000640523 KMT2AQ03164 3969 aa8.35□□□□□ -1.07
KCNMA1-283ENST00000640523 KRTAP19-1Q8IUB9 90 aa8.34□□□□□ -1.07
KCNMA1-283ENST00000640523 DYNC2H1Q8NCM8 4307 aaKnown RBP8.33□□□□□ -1.08
KCNMA1-283ENST00000640523 ANK2Q01484 3957 aa8.33□□□□□ -1.08
KCNMA1-283ENST00000640523 KRTAP19-8Q3LI54 63 aa8.31□□□□□ -1.08
KCNMA1-283ENST00000640523 FAT2Q9NYQ8 4349 aa8.27□□□□□ -1.09
KCNMA1-283ENST00000640523 LYSTQ99698 3801 aa8.22□□□□□ -1.09
KCNMA1-283ENST00000640523 FRAS1Q86XX4 4008 aa8.18□□□□□ -1.1
KCNMA1-283ENST00000640523 CMYA5Q8N3K9 4069 aa8.16□□□□□ -1.1
KCNMA1-283ENST00000640523 MYCBP2O75592 4640 aa8.13□□□□□ -1.11
KCNMA1-283ENST00000640523 MT1XP80297 61 aa8.13□□□□□ -1.11
KCNMA1-283ENST00000640523 VPS13BQ7Z7G8 4022 aa8.13□□□□□ -1.11
KCNMA1-283ENST00000640523 KRTAP12-4P60329 112 aa8.12□□□□□ -1.11
KCNMA1-283ENST00000640523 LRP1Q07954 4544 aaKnown RBP8.06□□□□□ -1.12
KCNMA1-283ENST00000640523 FAT3Q8TDW7 4589 aa8.03□□□□□ -1.12
KCNMA1-283ENST00000640523 LCE3BQ5TA77 95 aa8.02□□□□□ -1.12
KCNMA1-283ENST00000640523 DNAH6Q9C0G6 4158 aa8□□□□□ -1.13
KCNMA1-283ENST00000640523 DNAH7Q8WXX0 4024 aa8□□□□□ -1.13
KCNMA1-283ENST00000640523 MT1BP07438 61 aa7.98□□□□□ -1.13
KCNMA1-283ENST00000640523 SPRR2EP22531 72 aa7.96□□□□□ -1.13
KCNMA1-283ENST00000640523 SPRR2BP35325 72 aa7.96□□□□□ -1.13
KCNMA1-283ENST00000640523 SPRR2AP35326 72 aa7.96□□□□□ -1.13
KCNMA1-283ENST00000640523 HECTD4Q9Y4D8 3996 aa7.94□□□□□ -1.14
KCNMA1-283ENST00000640523 RYR3Q15413 4870 aa7.91□□□□□ -1.14
KCNMA1-283ENST00000640523 MT1GP13640 62 aa7.91□□□□□ -1.14
KCNMA1-283ENST00000640523 KRTAP17-1Q9BYP8 105 aa7.82□□□□□ -1.16
KCNMA1-283ENST00000640523 KIAA1109Q2LD37 5005 aa7.81□□□□□ -1.16
KCNMA1-283ENST00000640523 KRTAP9-8Q9BYQ0 159 aa7.79□□□□□ -1.16
KCNMA1-283ENST00000640523 KRTAP4-8A0A0G2JLE6 195 aa7.75□□□□□ -1.17
KCNMA1-283ENST00000640523 KRTAP4-8Q9BYQ9 185 aa7.75□□□□□ -1.17
KCNMA1-283ENST00000640523 HYDINQ4G0P3 5121 aa7.73□□□□□ -1.17
KCNMA1-283ENST00000640523 LCE3DQ9BYE3 92 aa7.7□□□□□ -1.18
KCNMA1-283ENST00000640523 SPRR2DP22532 72 aa7.69□□□□□ -1.18
KCNMA1-283ENST00000640523 RYR2Q92736 4967 aa7.69□□□□□ -1.18
KCNMA1-283ENST00000640523 LCE2BO14633 110 aa7.67□□□□□ -1.18
KCNMA1-283ENST00000640523 LCE3EQ5T5B0 92 aa7.63□□□□□ -1.19
KCNMA1-283ENST00000640523 LCE2CQ5TA81 110 aa7.6□□□□□ -1.19
KCNMA1-283ENST00000640523 KRTAP9-3Q9BYQ3 159 aa7.6□□□□□ -1.19
KCNMA1-283ENST00000640523 PKHD1P08F94 4074 aa7.59□□□□□ -1.19
KCNMA1-283ENST00000640523 LRP2P98164 4655 aa7.5□□□□□ -1.21
KCNMA1-283ENST00000640523 PKD1P98161 4303 aa7.5□□□□□ -1.21
KCNMA1-283ENST00000640523 HSPG2P98160 4391 aa7.49□□□□□ -1.21
KCNMA1-283ENST00000640523 HERC1Q15751 4861 aa7.48□□□□□ -1.21
KCNMA1-283ENST00000640523 MT1LQ93083 61 aa7.44□□□□□ -1.22
KCNMA1-283ENST00000640523 KRTAP4-7Q9BYR0 210 aa7.43□□□□□ -1.22
KCNMA1-283ENST00000640523 KRTAP19-3Q7Z4W3 81 aa7.35□□□□□ -1.23
KCNMA1-283ENST00000640523 MT1EP04732 61 aa7.31□□□□□ -1.24
KCNMA1-283ENST00000640523 KRTAP19-2Q3LHN2 52 aa7.28□□□□□ -1.24
KCNMA1-283ENST00000640523 LPAP08519 4548 aa7.28□□□□□ -1.24
KCNMA1-283ENST00000640523 HERC2O95714 4834 aa7.27□□□□□ -1.25
KCNMA1-283ENST00000640523 PCLOQ9Y6V0 5065 aa7.25□□□□□ -1.25
KCNMA1-283ENST00000640523 KMT2CQ8NEZ4 4911 aaKnown RBP7.23□□□□□ -1.25
KCNMA1-283ENST00000640523 SYNE1Q8NF91 8797 aaKnown RBP7.22□□□□□ -1.25
KCNMA1-283ENST00000640523 PKHD1L1Q86WI1 4243 aa7.16□□□□□ -1.26
KCNMA1-283ENST00000640523 MUC17Q685J3 4493 aa7.16□□□□□ -1.26
KCNMA1-283ENST00000640523 TNXBP22105 4242 aa7.12□□□□□ -1.27
KCNMA1-283ENST00000640523 PRM1P04553 51 aa7.12□□□□□ -1.27
KCNMA1-283ENST00000640523 LCE2DQ5TA82 110 aaPredicted RBP7.07□□□□□ -1.28
KCNMA1-283ENST00000640523 MT1MQ8N339 61 aa7.06□□□□□ -1.28
KCNMA1-283ENST00000640523 BIRC6Q9NR09 4857 aa7.03□□□□□ -1.28
KCNMA1-283ENST00000640523 EPPK1P58107 5090 aaKnown RBP7.01□□□□□ -1.29
KCNMA1-283ENST00000640523 FLGP20930 4061 aaPredicted RBP6.98□□□□□ -1.29
KCNMA1-283ENST00000640523 MT3P25713 68 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms