RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 KRTAP21-3Q3LHN1 58 aa5.37□□□□□ -1.55
SPIN3-230ENST00000639888 DNAH7Q8WXX0 4024 aa5.36□□□□□ -1.55
SPIN3-230ENST00000639888 DNAH11Q96DT5 4516 aa5.35□□□□□ -1.55
SPIN3-230ENST00000639888 PRKDCP78527 4128 aaKnown RBP5.35□□□□□ -1.55
SPIN3-230ENST00000639888 KMT2AQ03164 3969 aa5.34□□□□□ -1.55
SPIN3-230ENST00000639888 DNAH8Q96JB1 4490 aa5.33□□□□□ -1.56
SPIN3-230ENST00000639888 DNAH17Q9UFH2 4485 aa5.33□□□□□ -1.56
SPIN3-230ENST00000639888 DNHD1Q96M86 4753 aa5.31□□□□□ -1.56
SPIN3-230ENST00000639888 A0A1B0GVY2 172 aa5.3□□□□□ -1.56
SPIN3-230ENST00000639888 FRAS1Q86XX4 4008 aa5.29□□□□□ -1.56
SPIN3-230ENST00000639888 DNAH2Q9P225 4427 aa5.27□□□□□ -1.57
SPIN3-230ENST00000639888 DYNC2H1Q8NCM8 4307 aaKnown RBP5.27□□□□□ -1.57
SPIN3-230ENST00000639888 HECTD4Q9Y4D8 3996 aa5.25□□□□□ -1.57
SPIN3-230ENST00000639888 LRP1BQ9NZR2 4599 aa5.24□□□□□ -1.57
SPIN3-230ENST00000639888 PRO2289Q9P1D8 64 aa5.2□□□□□ -1.58
SPIN3-230ENST00000639888 DNAH5Q8TE73 4624 aa5.19□□□□□ -1.58
SPIN3-230ENST00000639888 DNAH6Q9C0G6 4158 aa5.18□□□□□ -1.58
SPIN3-230ENST00000639888 M0R2T5 61 aa5.17□□□□□ -1.58
SPIN3-230ENST00000639888 KRTAP10-4P60372 401 aaPredicted RBP5.16□□□□□ -1.58
SPIN3-230ENST00000639888 LCE2DQ5TA82 110 aaPredicted RBP5.14□□□□□ -1.59
SPIN3-230ENST00000639888 VPS13BQ7Z7G8 4022 aa5.12□□□□□ -1.59
SPIN3-230ENST00000639888 FAT1Q14517 4588 aa5.09□□□□□ -1.59
SPIN3-230ENST00000639888 INE1O15225 51 aa5.06□□□□□ -1.6
SPIN3-230ENST00000639888 DYNC1H1Q14204 4646 aaKnown RBP5.06□□□□□ -1.6
SPIN3-230ENST00000639888 HYDINQ4G0P3 5121 aa5.01□□□□□ -1.61
SPIN3-230ENST00000639888 SACSQ9NZJ4 4579 aa4.98□□□□□ -1.61
SPIN3-230ENST00000639888 LORP23490 312 aaPredicted RBP4.98□□□□□ -1.61
SPIN3-230ENST00000639888 MT1HL1P0DM35 61 aa4.95□□□□□ -1.62
SPIN3-230ENST00000639888 FAT2Q9NYQ8 4349 aa4.94□□□□□ -1.62
SPIN3-230ENST00000639888 PKHD1P08F94 4074 aa4.94□□□□□ -1.62
SPIN3-230ENST00000639888 PKD1P98161 4303 aa4.9□□□□□ -1.62
SPIN3-230ENST00000639888 MYCBP2O75592 4640 aa4.85□□□□□ -1.63
SPIN3-230ENST00000639888 APOBP04114 4563 aaKnown RBP4.84□□□□□ -1.63
SPIN3-230ENST00000639888 LRP1Q07954 4544 aaKnown RBP4.83□□□□□ -1.64
SPIN3-230ENST00000639888 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
SPIN3-230ENST00000639888 KMT2CQ8NEZ4 4911 aaKnown RBP4.75□□□□□ -1.65
SPIN3-230ENST00000639888 KIAA1109Q2LD37 5005 aa4.73□□□□□ -1.65
SPIN3-230ENST00000639888 RYR2Q92736 4967 aa4.73□□□□□ -1.65
SPIN3-230ENST00000639888 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
SPIN3-230ENST00000639888 FAT3Q8TDW7 4589 aa4.72□□□□□ -1.65
SPIN3-230ENST00000639888 RYR1P21817 5038 aa4.71□□□□□ -1.66
SPIN3-230ENST00000639888 KRTAP10-10P60014 251 aa4.71□□□□□ -1.66
SPIN3-230ENST00000639888 KRTAP17-1Q9BYP8 105 aa4.71□□□□□ -1.66
SPIN3-230ENST00000639888 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
SPIN3-230ENST00000639888 RYR3Q15413 4870 aa4.68□□□□□ -1.66
SPIN3-230ENST00000639888 PKHD1L1Q86WI1 4243 aa4.65□□□□□ -1.67
SPIN3-230ENST00000639888 HSPG2P98160 4391 aa4.62□□□□□ -1.67
SPIN3-230ENST00000639888 LRP2P98164 4655 aa4.59□□□□□ -1.67
SPIN3-230ENST00000639888 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
SPIN3-230ENST00000639888 SPRR5A0A1B0GTR4 108 aa4.57□□□□□ -1.68
SPIN3-230ENST00000639888 KRTAP4-1Q9BYQ7 146 aa4.57□□□□□ -1.68
SPIN3-230ENST00000639888 TNXBP22105 4242 aa4.57□□□□□ -1.68
SPIN3-230ENST00000639888 LCE2BO14633 110 aa4.54□□□□□ -1.68
SPIN3-230ENST00000639888 KRTAP10-12P60413 245 aa4.49□□□□□ -1.69
SPIN3-230ENST00000639888 EPPK1P58107 5090 aaKnown RBP4.46□□□□□ -1.69
SPIN3-230ENST00000639888 LPAP08519 4548 aa4.46□□□□□ -1.69
SPIN3-230ENST00000639888 LCE2CQ5TA81 110 aa4.43□□□□□ -1.7
SPIN3-230ENST00000639888 HERC2O95714 4834 aa4.36□□□□□ -1.71
SPIN3-230ENST00000639888 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
SPIN3-230ENST00000639888 ABCA13Q86UQ4 5058 aa4.3□□□□□ -1.72
SPIN3-230ENST00000639888 BIRC6Q9NR09 4857 aa4.24□□□□□ -1.73
SPIN3-230ENST00000639888 KRTAP19-2Q3LHN2 52 aa4.21□□□□□ -1.73
SPIN3-230ENST00000639888 SPRR2GQ9BYE4 73 aa4.21□□□□□ -1.74
SPIN3-230ENST00000639888 CRCT1Q9UGL9 99 aa4.18□□□□□ -1.74
SPIN3-230ENST00000639888 MT1HP80294 61 aa4.18□□□□□ -1.74
SPIN3-230ENST00000639888 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
SPIN3-230ENST00000639888 KRTAP10-5P60370 271 aa4.16□□□□□ -1.74
SPIN3-230ENST00000639888 MUC2Q02817 5179 aa4.14□□□□□ -1.75
SPIN3-230ENST00000639888 MT2AP02795 61 aa4.14□□□□□ -1.75
SPIN3-230ENST00000639888 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
SPIN3-230ENST00000639888 MT1FP04733 61 aa4.12□□□□□ -1.75
SPIN3-230ENST00000639888 KRTAP19-1Q8IUB9 90 aa4.12□□□□□ -1.75
SPIN3-230ENST00000639888 MUC17Q685J3 4493 aa4.12□□□□□ -1.75
SPIN3-230ENST00000639888 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
SPIN3-230ENST00000639888 HERC1Q15751 4861 aa4.1□□□□□ -1.75
SPIN3-230ENST00000639888 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.76
SPIN3-230ENST00000639888 PCLOQ9Y6V0 5065 aa4.05□□□□□ -1.76
SPIN3-230ENST00000639888 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
SPIN3-230ENST00000639888 KRTAP9-8Q9BYQ0 159 aa3.97□□□□□ -1.77
SPIN3-230ENST00000639888 FAT4Q6V0I7 4981 aa3.97□□□□□ -1.77
SPIN3-230ENST00000639888 KRTAP12-4P60329 112 aa3.96□□□□□ -1.77
SPIN3-230ENST00000639888 MT1XP80297 61 aa3.95□□□□□ -1.78
SPIN3-230ENST00000639888 KRTAP19-8Q3LI54 63 aa3.95□□□□□ -1.78
SPIN3-230ENST00000639888 RNF213Q63HN8 5207 aa3.95□□□□□ -1.78
SPIN3-230ENST00000639888 HMCN2Q8NDA2 5059 aa3.92□□□□□ -1.78
SPIN3-230ENST00000639888 MT1BP07438 61 aa3.91□□□□□ -1.78
SPIN3-230ENST00000639888 UBR4Q5T4S7 5183 aa3.9□□□□□ -1.78
SPIN3-230ENST00000639888 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
SPIN3-230ENST00000639888 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
SPIN3-230ENST00000639888 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
SPIN3-230ENST00000639888 KRTAP9-3Q9BYQ3 159 aa3.81□□□□□ -1.8
SPIN3-230ENST00000639888 KRTAP4-8A0A0G2JLE6 195 aa3.79□□□□□ -1.8
SPIN3-230ENST00000639888 KRTAP4-8Q9BYQ9 185 aa3.79□□□□□ -1.8
SPIN3-230ENST00000639888 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
SPIN3-230ENST00000639888 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
SPIN3-230ENST00000639888 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
SPIN3-230ENST00000639888 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
SPIN3-230ENST00000639888 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
SPIN3-230ENST00000639888 LCE3BQ5TA77 95 aa3.66□□□□□ -1.82
SPIN3-230ENST00000639888 MT1GP13640 62 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms