RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 NISCHQ9Y2I1 1504 aa19.35■□□□□ 0.69
SPIN3-230ENST00000639888 PELP1Q8IZL8 1130 aaKnown RBP18.66■□□□□ 0.58
SPIN3-230ENST00000639888 MYT1Q01538 1121 aa18.22■□□□□ 0.51
SPIN3-230ENST00000639888 PCGF6Q9BYE7 350 aa18.19■□□□□ 0.5
SPIN3-230ENST00000639888 HRCP23327 699 aa18.12■□□□□ 0.49
SPIN3-230ENST00000639888 SUPT5HO00267 1087 aaKnown RBP18■□□□□ 0.47
SPIN3-230ENST00000639888 PPARGC1BQ86YN6 1023 aaKnown RBP17.94■□□□□ 0.46
SPIN3-230ENST00000639888 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
SPIN3-230ENST00000639888 CENPBP07199 599 aaPredicted RBP17.52■□□□□ 0.4
SPIN3-230ENST00000639888 DCAF8L2P0C7V8 631 aa17.44■□□□□ 0.38
SPIN3-230ENST00000639888 ZEB1P37275 1124 aaPredicted RBP17.41■□□□□ 0.38
SPIN3-230ENST00000639888 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
SPIN3-230ENST00000639888 EHMT2Q96KQ7 1210 aa17.22■□□□□ 0.35
SPIN3-230ENST00000639888 YTHDC1Q96MU7 727 aaKnown RBP17.21■□□□□ 0.34
SPIN3-230ENST00000639888 GTF3C3Q9Y5Q9 886 aa17.19■□□□□ 0.34
SPIN3-230ENST00000639888 TRIM26Q12899 539 aaPredicted RBP17.14■□□□□ 0.33
SPIN3-230ENST00000639888 ACIN1Q9UKV3 1341 aaKnown RBP17.03■□□□□ 0.32
SPIN3-230ENST00000639888 CCER1Q8TC90 406 aaPredicted RBP17.03■□□□□ 0.32
SPIN3-230ENST00000639888 LOC105371045A0A1W2PR82 267 aa16.95■□□□□ 0.3
SPIN3-230ENST00000639888 CHIC1Q5VXU3 224 aa16.9■□□□□ 0.3
SPIN3-230ENST00000639888 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
SPIN3-230ENST00000639888 FAM9AQ8IZU1 332 aaPredicted RBP16.88■□□□□ 0.29
SPIN3-230ENST00000639888 TTBK1Q5TCY1 1321 aaPredicted RBP16.87■□□□□ 0.29
SPIN3-230ENST00000639888 ERICH6Q7L0X2 663 aa16.84■□□□□ 0.29
SPIN3-230ENST00000639888 DIEXFQ68CQ4 756 aaKnown RBP16.83■□□□□ 0.28
SPIN3-230ENST00000639888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
SPIN3-230ENST00000639888 BCL11AQ9H165 835 aa16.62■□□□□ 0.25
SPIN3-230ENST00000639888 NEFLP07196 543 aa16.45■□□□□ 0.22
SPIN3-230ENST00000639888 TRIM41Q8WV44 630 aa16.43■□□□□ 0.22
SPIN3-230ENST00000639888 BCANQ96GW7 911 aa16.39■□□□□ 0.21
SPIN3-230ENST00000639888 ANP32EQ9BTT0 268 aa16.38■□□□□ 0.21
SPIN3-230ENST00000639888 MYO15BQ96JP2 1530 aa16.29■□□□□ 0.2
SPIN3-230ENST00000639888 DCAF1Q9Y4B6 1507 aa16.26■□□□□ 0.19
SPIN3-230ENST00000639888 ZCCHC6Q5VYS8 1495 aaKnown RBP16.25■□□□□ 0.19
SPIN3-230ENST00000639888 ZNF316A6NFI3 1004 aaPredicted RBP16.25■□□□□ 0.19
SPIN3-230ENST00000639888 APLP2Q06481 763 aa16.14■□□□□ 0.17
SPIN3-230ENST00000639888 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
SPIN3-230ENST00000639888 MIER1Q8N108 512 aa16.09■□□□□ 0.17
SPIN3-230ENST00000639888 CCDC180Q9P1Z9 1646 aa16.07■□□□□ 0.16
SPIN3-230ENST00000639888 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
SPIN3-230ENST00000639888 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
SPIN3-230ENST00000639888 PRKCSHP14314 528 aaPredicted RBP16.01■□□□□ 0.15
SPIN3-230ENST00000639888 EIF5BO60841 1220 aaKnown RBP15.97■□□□□ 0.15
SPIN3-230ENST00000639888 FKBP8Q14318 412 aa15.97■□□□□ 0.15
SPIN3-230ENST00000639888 CLSPNQ9HAW4 1339 aa15.94■□□□□ 0.14
SPIN3-230ENST00000639888 RANGAP1P46060 587 aaPredicted RBP15.92■□□□□ 0.14
SPIN3-230ENST00000639888 SUPT16HQ9Y5B9 1047 aaKnown RBP15.91■□□□□ 0.14
SPIN3-230ENST00000639888 UBTFP17480 764 aaKnown RBP15.91■□□□□ 0.14
SPIN3-230ENST00000639888 CDK11AQ9UQ88 783 aaPredicted RBP15.9■□□□□ 0.14
SPIN3-230ENST00000639888 TSHZ2Q9NRE2 1034 aa15.87■□□□□ 0.13
SPIN3-230ENST00000639888 ITGAEP38570 1179 aa15.85■□□□□ 0.13
SPIN3-230ENST00000639888 NBR1Q14596 966 aa15.84■□□□□ 0.13
SPIN3-230ENST00000639888 MYT1LQ9UL68 1186 aa15.78■□□□□ 0.12
SPIN3-230ENST00000639888 RTN4Q9NQC3 1192 aaKnown RBP15.73■□□□□ 0.11
SPIN3-230ENST00000639888 RBM19Q9Y4C8 960 aaKnown RBP15.71■□□□□ 0.1
SPIN3-230ENST00000639888 DEKP35659 375 aaKnown RBP15.68■□□□□ 0.1
SPIN3-230ENST00000639888 ABCC9O60706 1549 aa15.66■□□□□ 0.1
SPIN3-230ENST00000639888 DAXXQ9UER7 740 aaPredicted RBP15.63■□□□□ 0.09
SPIN3-230ENST00000639888 CCDC136Q96JN2 1154 aa15.63■□□□□ 0.09
SPIN3-230ENST00000639888 TRIM52Q96A61 297 aa15.6■□□□□ 0.09
SPIN3-230ENST00000639888 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.59■□□□□ 0.09
SPIN3-230ENST00000639888 SCRIBQ14160 1630 aa15.59■□□□□ 0.09
SPIN3-230ENST00000639888 ANO8Q9HCE9 1232 aaPredicted RBP15.57■□□□□ 0.08
SPIN3-230ENST00000639888 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
SPIN3-230ENST00000639888 ANP32AP39687 249 aaKnown RBP15.55■□□□□ 0.08
SPIN3-230ENST00000639888 ANP32CO43423 234 aa15.51■□□□□ 0.07
SPIN3-230ENST00000639888 CNGB1Q14028 1251 aaPredicted RBP15.49■□□□□ 0.07
SPIN3-230ENST00000639888 GLIPR1L2Q4G1C9 344 aa15.49■□□□□ 0.07
SPIN3-230ENST00000639888 NPM2Q86SE8 214 aaKnown RBP15.49■□□□□ 0.07
SPIN3-230ENST00000639888 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
SPIN3-230ENST00000639888 DDX10Q13206 875 aaKnown RBP15.46■□□□□ 0.07
SPIN3-230ENST00000639888 ZBTB47Q9UFB7 747 aaPredicted RBP15.46■□□□□ 0.07
SPIN3-230ENST00000639888 HNRNPUQ00839 825 aaKnown RBP eCLIP15.38■□□□□ 0.05
SPIN3-230ENST00000639888 NOP58Q9Y2X3 529 aaKnown RBP15.35■□□□□ 0.05
SPIN3-230ENST00000639888 SALL2Q9Y467 1007 aaPredicted RBP15.35■□□□□ 0.05
SPIN3-230ENST00000639888 ATP1B4Q9UN42 357 aaPredicted RBP15.31■□□□□ 0.04
SPIN3-230ENST00000639888 ERICH6BQ5W0A0 696 aa15.28■□□□□ 0.04
SPIN3-230ENST00000639888 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
SPIN3-230ENST00000639888 POLR3GLQ9BT43 218 aa15.28■□□□□ 0.04
SPIN3-230ENST00000639888 NEFMP07197 916 aa15.26■□□□□ 0.03
SPIN3-230ENST00000639888 HIRIP3Q9BW71 556 aaPredicted RBP15.24■□□□□ 0.03
SPIN3-230ENST00000639888 LAS1LQ9Y4W2 734 aaKnown RBP15.23■□□□□ 0.03
SPIN3-230ENST00000639888 CECR2Q9BXF3 1484 aa15.21■□□□□ 0.03
SPIN3-230ENST00000639888 KCNH8Q96L42 1107 aa15.21■□□□□ 0.03
SPIN3-230ENST00000639888 RB1CC1Q8TDY2 1594 aa15.19■□□□□ 0.02
SPIN3-230ENST00000639888 B4GALNT3Q6L9W6 998 aa15.18■□□□□ 0.02
SPIN3-230ENST00000639888 NACADO15069 1562 aa15.17■□□□□ 0.02
SPIN3-230ENST00000639888 ARXQ96QS3 562 aa15.16■□□□□ 0.02
SPIN3-230ENST00000639888 FAM9BQ8IZU0 186 aa15.14■□□□□ 0.01
SPIN3-230ENST00000639888 FANCIQ9NVI1 1328 aa15.14■□□□□ 0.01
SPIN3-230ENST00000639888 IL27Q8NEV9 243 aa15.14■□□□□ 0.01
SPIN3-230ENST00000639888 MSH5O43196 834 aa15.13■□□□□ 0.01
SPIN3-230ENST00000639888 PPP4R2Q9NY27 417 aa15.12■□□□□ 0.01
SPIN3-230ENST00000639888 TIMELESSQ9UNS1 1208 aa15.08■□□□□ 0
SPIN3-230ENST00000639888 MROH2BQ7Z745 1585 aa15.08■□□□□ 0
SPIN3-230ENST00000639888 PKNOX2Q96KN3 472 aa15.07■□□□□ 0
SPIN3-230ENST00000639888 VSIG10Q8N0Z9 540 aa15.06■□□□□ 0
SPIN3-230ENST00000639888 FAM50AQ14320 339 aaKnown RBP15.05■□□□□ -0
SPIN3-230ENST00000639888 NAP1L5Q96NT1 182 aaPredicted RBP15.03■□□□□ -0
SPIN3-230ENST00000639888 PPM1GO15355 546 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms