RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 C10orf95Q9H7T3 257 aa6.7□□□□□ -1.34
SCARB2-215ENST00000639145 KRTAP10-4P60372 401 aaPredicted RBP6.69□□□□□ -1.34
SCARB2-215ENST00000639145 MYCBP2O75592 4640 aa6.69□□□□□ -1.34
SCARB2-215ENST00000639145 DNAH7Q8WXX0 4024 aa6.67□□□□□ -1.34
SCARB2-215ENST00000639145 CMYA5Q8N3K9 4069 aa6.66□□□□□ -1.34
SCARB2-215ENST00000639145 A0A0A0MQY5 61 aa6.64□□□□□ -1.35
SCARB2-215ENST00000639145 HYDINQ4G0P3 5121 aa6.63□□□□□ -1.35
SCARB2-215ENST00000639145 KRTAP3-1Q9BYR8 98 aa6.63□□□□□ -1.35
SCARB2-215ENST00000639145 PRO2289Q9P1D8 64 aa6.63□□□□□ -1.35
SCARB2-215ENST00000639145 RYR3Q15413 4870 aa6.61□□□□□ -1.35
SCARB2-215ENST00000639145 FAT3Q8TDW7 4589 aa6.59□□□□□ -1.35
SCARB2-215ENST00000639145 DNAH2Q9P225 4427 aa6.59□□□□□ -1.36
SCARB2-215ENST00000639145 VPS13BQ7Z7G8 4022 aa6.58□□□□□ -1.36
SCARB2-215ENST00000639145 DNAH6Q9C0G6 4158 aa6.56□□□□□ -1.36
SCARB2-215ENST00000639145 DNAH17Q9UFH2 4485 aa6.55□□□□□ -1.36
SCARB2-215ENST00000639145 SACSQ9NZJ4 4579 aa6.53□□□□□ -1.36
SCARB2-215ENST00000639145 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
SCARB2-215ENST00000639145 LRP1Q07954 4544 aaKnown RBP6.52□□□□□ -1.37
SCARB2-215ENST00000639145 FRAS1Q86XX4 4008 aa6.52□□□□□ -1.37
SCARB2-215ENST00000639145 KMT2CQ8NEZ4 4911 aaKnown RBP6.51□□□□□ -1.37
SCARB2-215ENST00000639145 DNAH3Q8TD57 4116 aa6.51□□□□□ -1.37
SCARB2-215ENST00000639145 H3BS24 57 aa6.48□□□□□ -1.37
SCARB2-215ENST00000639145 ALMS1Q8TCU4 4167 aa6.48□□□□□ -1.37
SCARB2-215ENST00000639145 APOBP04114 4563 aaKnown RBP6.46□□□□□ -1.38
SCARB2-215ENST00000639145 KRTAP12-2P59991 146 aa6.46□□□□□ -1.38
SCARB2-215ENST00000639145 PKHD1P08F94 4074 aa6.46□□□□□ -1.38
SCARB2-215ENST00000639145 NDUFAF8A1L188 74 aa6.45□□□□□ -1.38
SCARB2-215ENST00000639145 DYNC2H1Q8NCM8 4307 aaKnown RBP6.45□□□□□ -1.38
SCARB2-215ENST00000639145 KRTAP17-1Q9BYP8 105 aa6.41□□□□□ -1.38
SCARB2-215ENST00000639145 KRTAP12-1P59990 96 aa6.37□□□□□ -1.39
SCARB2-215ENST00000639145 RYR2Q92736 4967 aa6.35□□□□□ -1.39
SCARB2-215ENST00000639145 FAT2Q9NYQ8 4349 aa6.35□□□□□ -1.39
SCARB2-215ENST00000639145 KRTAP10-6P60371 365 aaPredicted RBP6.33□□□□□ -1.4
SCARB2-215ENST00000639145 KRTAP13-4Q3LI77 160 aa6.32□□□□□ -1.4
SCARB2-215ENST00000639145 HECTD4Q9Y4D8 3996 aa6.3□□□□□ -1.4
SCARB2-215ENST00000639145 HERC2O95714 4834 aa6.27□□□□□ -1.41
SCARB2-215ENST00000639145 LRP2P98164 4655 aa6.24□□□□□ -1.41
SCARB2-215ENST00000639145 KRTAP3-3Q9BYR6 98 aa6.22□□□□□ -1.41
SCARB2-215ENST00000639145 EPPK1P58107 5090 aaKnown RBP6.18□□□□□ -1.42
SCARB2-215ENST00000639145 KRTAP4-1Q9BYQ7 146 aa6.16□□□□□ -1.42
SCARB2-215ENST00000639145 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.42
SCARB2-215ENST00000639145 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.44
SCARB2-215ENST00000639145 PCLOQ9Y6V0 5065 aa6.07□□□□□ -1.44
SCARB2-215ENST00000639145 HSPG2P98160 4391 aa6.04□□□□□ -1.44
SCARB2-215ENST00000639145 LPAP08519 4548 aa6□□□□□ -1.45
SCARB2-215ENST00000639145 PKD1P98161 4303 aa5.99□□□□□ -1.45
SCARB2-215ENST00000639145 ABCA13Q86UQ4 5058 aa5.98□□□□□ -1.45
SCARB2-215ENST00000639145 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
SCARB2-215ENST00000639145 BIRC6Q9NR09 4857 aa5.94□□□□□ -1.46
SCARB2-215ENST00000639145 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
SCARB2-215ENST00000639145 RNF213Q63HN8 5207 aa5.84□□□□□ -1.47
SCARB2-215ENST00000639145 HERC1Q15751 4861 aa5.83□□□□□ -1.48
SCARB2-215ENST00000639145 MT1HP80294 61 aa5.83□□□□□ -1.48
SCARB2-215ENST00000639145 FSIP2Q5CZC0 6907 aa5.8□□□□□ -1.48
SCARB2-215ENST00000639145 MUC2Q02817 5179 aa5.79□□□□□ -1.48
SCARB2-215ENST00000639145 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
SCARB2-215ENST00000639145 MT2AP02795 61 aa5.73□□□□□ -1.49
SCARB2-215ENST00000639145 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
SCARB2-215ENST00000639145 UBR4Q5T4S7 5183 aa5.7□□□□□ -1.5
SCARB2-215ENST00000639145 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
SCARB2-215ENST00000639145 PKHD1L1Q86WI1 4243 aa5.65□□□□□ -1.51
SCARB2-215ENST00000639145 MT1FP04733 61 aa5.64□□□□□ -1.51
SCARB2-215ENST00000639145 FAT4Q6V0I7 4981 aa5.62□□□□□ -1.51
SCARB2-215ENST00000639145 KRTAP8-1Q8IUC2 63 aa5.61□□□□□ -1.51
SCARB2-215ENST00000639145 TNXBP22105 4242 aa5.58□□□□□ -1.52
SCARB2-215ENST00000639145 SPRR2GQ9BYE4 73 aa5.53□□□□□ -1.52
SCARB2-215ENST00000639145 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
SCARB2-215ENST00000639145 LCE2CQ5TA81 110 aa5.38□□□□□ -1.55
SCARB2-215ENST00000639145 KRTAP19-1Q8IUB9 90 aa5.34□□□□□ -1.55
SCARB2-215ENST00000639145 SPRR2FQ96RM1 72 aa5.34□□□□□ -1.56
SCARB2-215ENST00000639145 HMCN2Q8NDA2 5059 aa5.33□□□□□ -1.56
SCARB2-215ENST00000639145 KRTAP9-8Q9BYQ0 159 aa5.26□□□□□ -1.57
SCARB2-215ENST00000639145 KRTAP19-2Q3LHN2 52 aa5.26□□□□□ -1.57
SCARB2-215ENST00000639145 MUC17Q685J3 4493 aa5.25□□□□□ -1.57
SCARB2-215ENST00000639145 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
SCARB2-215ENST00000639145 KRTAP19-8Q3LI54 63 aa5.2□□□□□ -1.58
SCARB2-215ENST00000639145 KRTAP10-5P60370 271 aa5.18□□□□□ -1.58
SCARB2-215ENST00000639145 FLGP20930 4061 aaPredicted RBP5.16□□□□□ -1.58
SCARB2-215ENST00000639145 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
SCARB2-215ENST00000639145 MT1BP07438 61 aa5.13□□□□□ -1.59
SCARB2-215ENST00000639145 USH2AO75445 5202 aa5.11□□□□□ -1.59
SCARB2-215ENST00000639145 KRTAP4-8A0A0G2JLE6 195 aa5.09□□□□□ -1.59
SCARB2-215ENST00000639145 KRTAP4-8Q9BYQ9 185 aa5.09□□□□□ -1.59
SCARB2-215ENST00000639145 MT1XP80297 61 aa5.08□□□□□ -1.6
SCARB2-215ENST00000639145 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
SCARB2-215ENST00000639145 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
SCARB2-215ENST00000639145 INE1O15225 51 aa5.05□□□□□ -1.6
SCARB2-215ENST00000639145 LCE2BO14633 110 aa5.03□□□□□ -1.6
SCARB2-215ENST00000639145 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
SCARB2-215ENST00000639145 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
SCARB2-215ENST00000639145 SPRR2EP22531 72 aa4.97□□□□□ -1.61
SCARB2-215ENST00000639145 SPRR2BP35325 72 aa4.97□□□□□ -1.61
SCARB2-215ENST00000639145 SPRR2AP35326 72 aa4.97□□□□□ -1.61
SCARB2-215ENST00000639145 DSTQ03001 7570 aaKnown RBP4.87□□□□□ -1.63
SCARB2-215ENST00000639145 KMT2DO14686 5537 aa4.84□□□□□ -1.63
SCARB2-215ENST00000639145 LCE2AQ5TA79 106 aaPredicted RBP4.79□□□□□ -1.64
SCARB2-215ENST00000639145 SPRR2DP22532 72 aa4.79□□□□□ -1.64
SCARB2-215ENST00000639145 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
SCARB2-215ENST00000639145 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.65
SCARB2-215ENST00000639145 MT1GP13640 62 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms