RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 DCAF8L2P0C7V8 631 aa24.94■■□□□ 1.58
SCARB2-215ENST00000639145 NISCHQ9Y2I1 1504 aa24.65■■□□□ 1.54
SCARB2-215ENST00000639145 SUPT5HO00267 1087 aaKnown RBP23.3■■□□□ 1.32
SCARB2-215ENST00000639145 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
SCARB2-215ENST00000639145 EHMT2Q96KQ7 1210 aa22.46■■□□□ 1.19
SCARB2-215ENST00000639145 FAM9AQ8IZU1 332 aaPredicted RBP21.96■■□□□ 1.11
SCARB2-215ENST00000639145 APLP2Q06481 763 aa21.63■■□□□ 1.05
SCARB2-215ENST00000639145 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
SCARB2-215ENST00000639145 TTBK1Q5TCY1 1321 aaPredicted RBP21.56■■□□□ 1.04
SCARB2-215ENST00000639145 TRIM41Q8WV44 630 aa21.53■■□□□ 1.04
SCARB2-215ENST00000639145 ABCC9O60706 1549 aa21.42■■□□□ 1.02
SCARB2-215ENST00000639145 ATP1B4Q9UN42 357 aaPredicted RBP21.29■■□□□ 1
SCARB2-215ENST00000639145 UBTFP17480 764 aaKnown RBP21.25■□□□□ 0.99
SCARB2-215ENST00000639145 PABPN1Q86U42 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
SCARB2-215ENST00000639145 PCGF6Q9BYE7 350 aa21.1■□□□□ 0.97
SCARB2-215ENST00000639145 PPARGC1BQ86YN6 1023 aaKnown RBP20.99■□□□□ 0.95
SCARB2-215ENST00000639145 LOC105371045A0A1W2PR82 267 aa20.93■□□□□ 0.94
SCARB2-215ENST00000639145 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
SCARB2-215ENST00000639145 CCER1Q8TC90 406 aaPredicted RBP20.69■□□□□ 0.9
SCARB2-215ENST00000639145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
SCARB2-215ENST00000639145 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
SCARB2-215ENST00000639145 ITGAEP38570 1179 aa20.52■□□□□ 0.87
SCARB2-215ENST00000639145 MYT1LQ9UL68 1186 aa20.48■□□□□ 0.87
SCARB2-215ENST00000639145 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
SCARB2-215ENST00000639145 SCRIBQ14160 1630 aa20.4■□□□□ 0.86
SCARB2-215ENST00000639145 ZEB1P37275 1124 aaPredicted RBP20.3■□□□□ 0.84
SCARB2-215ENST00000639145 FBLN2P98095 1184 aa20.3■□□□□ 0.84
SCARB2-215ENST00000639145 TRIM26Q12899 539 aaPredicted RBP20.23■□□□□ 0.83
SCARB2-215ENST00000639145 PELP1Q8IZL8 1130 aaKnown RBP20.14■□□□□ 0.81
SCARB2-215ENST00000639145 CCDC180Q9P1Z9 1646 aa20.11■□□□□ 0.81
SCARB2-215ENST00000639145 POLR3GLQ9BT43 218 aa20.02■□□□□ 0.79
SCARB2-215ENST00000639145 FAM50AQ14320 339 aaKnown RBP20■□□□□ 0.79
SCARB2-215ENST00000639145 P3H3Q8IVL6 736 aa19.99■□□□□ 0.79
SCARB2-215ENST00000639145 ARID3CA6NKF2 412 aa19.97■□□□□ 0.79
SCARB2-215ENST00000639145 YTHDC1Q96MU7 727 aaKnown RBP19.94■□□□□ 0.78
SCARB2-215ENST00000639145 CENPBP07199 599 aaPredicted RBP19.92■□□□□ 0.78
SCARB2-215ENST00000639145 CSRNP3Q8WYN3 585 aa19.91■□□□□ 0.78
SCARB2-215ENST00000639145 CNGB1Q14028 1251 aaPredicted RBP19.9■□□□□ 0.78
SCARB2-215ENST00000639145 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
SCARB2-215ENST00000639145 RB1CC1Q8TDY2 1594 aa19.76■□□□□ 0.75
SCARB2-215ENST00000639145 CECR2Q9BXF3 1484 aa19.75■□□□□ 0.75
SCARB2-215ENST00000639145 RSF1Q96T23 1441 aaPredicted RBP19.75■□□□□ 0.75
SCARB2-215ENST00000639145 HRCP23327 699 aa19.74■□□□□ 0.75
SCARB2-215ENST00000639145 SLC4A1APQ9BWU0 796 aaKnown RBP19.68■□□□□ 0.74
SCARB2-215ENST00000639145 NEUROD1Q13562 356 aa19.66■□□□□ 0.74
SCARB2-215ENST00000639145 MYO15BQ96JP2 1530 aa19.63■□□□□ 0.73
SCARB2-215ENST00000639145 ZNF777Q9ULD5 760 aaPredicted RBP19.63■□□□□ 0.73
SCARB2-215ENST00000639145 NEFLP07196 543 aa19.63■□□□□ 0.73
SCARB2-215ENST00000639145 ZNF326Q5BKZ1 582 aaKnown RBP19.58■□□□□ 0.72
SCARB2-215ENST00000639145 NACADO15069 1562 aa19.56■□□□□ 0.72
SCARB2-215ENST00000639145 CDK11AQ9UQ88 783 aaPredicted RBP19.5■□□□□ 0.71
SCARB2-215ENST00000639145 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
SCARB2-215ENST00000639145 NPM1P06748 294 aaKnown RBP eCLIP19.44■□□□□ 0.7
SCARB2-215ENST00000639145 BAZ1BQ9UIG0 1483 aaKnown RBP19.37■□□□□ 0.69
SCARB2-215ENST00000639145 MROH2BQ7Z745 1585 aa19.35■□□□□ 0.69
SCARB2-215ENST00000639145 BCANQ96GW7 911 aa19.34■□□□□ 0.69
SCARB2-215ENST00000639145 ERICH6Q7L0X2 663 aa19.33■□□□□ 0.69
SCARB2-215ENST00000639145 PLPPR3Q6T4P5 718 aa19.33■□□□□ 0.68
SCARB2-215ENST00000639145 DIEXFQ68CQ4 756 aaKnown RBP19.3■□□□□ 0.68
SCARB2-215ENST00000639145 DCAF1Q9Y4B6 1507 aa19.27■□□□□ 0.67
SCARB2-215ENST00000639145 CHIC2Q9UKJ5 165 aa19.26■□□□□ 0.67
SCARB2-215ENST00000639145 ESF1Q9H501 851 aaKnown RBP19.25■□□□□ 0.67
SCARB2-215ENST00000639145 CHGAP10645 457 aaKnown RBP19.21■□□□□ 0.67
SCARB2-215ENST00000639145 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
SCARB2-215ENST00000639145 KCNH8Q96L42 1107 aa19.17■□□□□ 0.66
SCARB2-215ENST00000639145 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.16■□□□□ 0.66
SCARB2-215ENST00000639145 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
SCARB2-215ENST00000639145 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
SCARB2-215ENST00000639145 MTUS2Q5JR59 1369 aa19.14■□□□□ 0.65
SCARB2-215ENST00000639145 STAG3Q9UJ98 1225 aa19.12■□□□□ 0.65
SCARB2-215ENST00000639145 CLIP1P30622 1438 aa19.11■□□□□ 0.65
SCARB2-215ENST00000639145 SOGA1O94964 1423 aa19.1■□□□□ 0.65
SCARB2-215ENST00000639145 TSPY4P0CV99 314 aa19.1■□□□□ 0.65
SCARB2-215ENST00000639145 TSPY10P0CW01 314 aa19.1■□□□□ 0.65
SCARB2-215ENST00000639145 ABCC8Q09428 1581 aa19.07■□□□□ 0.64
SCARB2-215ENST00000639145 WIZO95785 1651 aa19.07■□□□□ 0.64
SCARB2-215ENST00000639145 CCDC88BA6NC98 1476 aa19.06■□□□□ 0.64
SCARB2-215ENST00000639145 ANP32CO43423 234 aa19.04■□□□□ 0.64
SCARB2-215ENST00000639145 KIF27Q86VH2 1401 aa19.03■□□□□ 0.64
SCARB2-215ENST00000639145 PLEKHD1A6NEE1 506 aa19.02■□□□□ 0.64
SCARB2-215ENST00000639145 ZNF316A6NFI3 1004 aaPredicted RBP18.99■□□□□ 0.63
SCARB2-215ENST00000639145 TONSLQ96HA7 1378 aa18.96■□□□□ 0.63
SCARB2-215ENST00000639145 RRP7BPQ9NSQ0 103 aa18.96■□□□□ 0.63
SCARB2-215ENST00000639145 SLC24A1O60721 1099 aa18.95■□□□□ 0.62
SCARB2-215ENST00000639145 EEA1Q15075 1411 aa18.95■□□□□ 0.62
SCARB2-215ENST00000639145 SENP3Q9H4L4 574 aaPredicted RBP18.94■□□□□ 0.62
SCARB2-215ENST00000639145 CEP162Q5TB80 1403 aa18.93■□□□□ 0.62
SCARB2-215ENST00000639145 GOLGA3Q08378 1498 aa18.92■□□□□ 0.62
SCARB2-215ENST00000639145 KDM2AQ9Y2K7 1162 aa18.91■□□□□ 0.62
SCARB2-215ENST00000639145 CLSPNQ9HAW4 1339 aa18.87■□□□□ 0.61
SCARB2-215ENST00000639145 DAXXQ9UER7 740 aaPredicted RBP18.87■□□□□ 0.61
SCARB2-215ENST00000639145 CUX2O14529 1486 aa18.86■□□□□ 0.61
SCARB2-215ENST00000639145 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
SCARB2-215ENST00000639145 HIRIP3Q9BW71 556 aaPredicted RBP18.85■□□□□ 0.61
SCARB2-215ENST00000639145 CARMIL1Q5VZK9 1371 aa18.82■□□□□ 0.6
SCARB2-215ENST00000639145 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
SCARB2-215ENST00000639145 NEFMP07197 916 aa18.8■□□□□ 0.6
SCARB2-215ENST00000639145 CEP164Q9UPV0 1460 aa18.79■□□□□ 0.6
SCARB2-215ENST00000639145 BCL11AQ9H165 835 aa18.79■□□□□ 0.6
SCARB2-215ENST00000639145 DDX10Q13206 875 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms