RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	SACS	Q9NZJ4	4579 aa		7.11	□□□□□ -1.27
KCNMA1-238	ENST00000638514	KRTAP10-6	P60371	365 aa	Predicted RBP	7.1	□□□□□ -1.27
KCNMA1-238	ENST00000638514	KRTAP13-4	Q3LI77	160 aa		7.09	□□□□□ -1.27
KCNMA1-238	ENST00000638514	FAT2	Q9NYQ8	4349 aa		7.07	□□□□□ -1.28
KCNMA1-238	ENST00000638514	MYCBP2	O75592	4640 aa		7.03	□□□□□ -1.28
KCNMA1-238	ENST00000638514	HYDIN	Q4G0P3	5121 aa		7.03	□□□□□ -1.28
KCNMA1-238	ENST00000638514	KRTAP3-3	Q9BYR6	98 aa		7.02	□□□□□ -1.29
KCNMA1-238	ENST00000638514	KRTAP3-2	Q9BYR7	98 aa		7.01	□□□□□ -1.29
KCNMA1-238	ENST00000638514	PKHD1L1	Q86WI1	4243 aa		6.98	□□□□□ -1.29
KCNMA1-238	ENST00000638514		S4R3F8	94 aa		6.97	□□□□□ -1.29
KCNMA1-238	ENST00000638514	PKHD1	P08F94	4074 aa		6.94	□□□□□ -1.3
KCNMA1-238	ENST00000638514		A0A1B0GVY2	172 aa		6.92	□□□□□ -1.3
KCNMA1-238	ENST00000638514	DYNC1H1	Q14204	4646 aa	Known RBP	6.91	□□□□□ -1.3
KCNMA1-238	ENST00000638514	KRTAP12-2	P59991	146 aa		6.9	□□□□□ -1.3
KCNMA1-238	ENST00000638514	APOB	P04114	4563 aa	Known RBP	6.87	□□□□□ -1.31
KCNMA1-238	ENST00000638514	FAT3	Q8TDW7	4589 aa		6.85	□□□□□ -1.31
KCNMA1-238	ENST00000638514	KRTAP21-3	Q3LHN1	58 aa		6.85	□□□□□ -1.31
KCNMA1-238	ENST00000638514	LRP1	Q07954	4544 aa	Known RBP	6.85	□□□□□ -1.31
KCNMA1-238	ENST00000638514	XP32	Q5T750	250 aa		6.85	□□□□□ -1.31
KCNMA1-238	ENST00000638514	KRTAP10-4	P60372	401 aa	Predicted RBP	6.83	□□□□□ -1.32
KCNMA1-238	ENST00000638514	KRTAP10-8	P60410	259 aa		6.83	□□□□□ -1.32
KCNMA1-238	ENST00000638514	KRTAP12-1	P59990	96 aa		6.83	□□□□□ -1.32
KCNMA1-238	ENST00000638514		R4GN34	69 aa		6.82	□□□□□ -1.32
KCNMA1-238	ENST00000638514	KIAA1109	Q2LD37	5005 aa		6.82	□□□□□ -1.32
KCNMA1-238	ENST00000638514	CAMK2N1	Q7Z7J9	78 aa		6.81	□□□□□ -1.32
KCNMA1-238	ENST00000638514		M0QZ58	72 aa		6.8	□□□□□ -1.32
KCNMA1-238	ENST00000638514	LUZP6	Q538Z0	58 aa		6.78	□□□□□ -1.32
KCNMA1-238	ENST00000638514	KMT2C	Q8NEZ4	4911 aa	Known RBP	6.76	□□□□□ -1.33
KCNMA1-238	ENST00000638514	RYR1	P21817	5038 aa		6.74	□□□□□ -1.33
KCNMA1-238	ENST00000638514	HSPG2	P98160	4391 aa		6.69	□□□□□ -1.34
KCNMA1-238	ENST00000638514	KRTAP4-5	Q9BYR2	181 aa		6.67	□□□□□ -1.34
KCNMA1-238	ENST00000638514	RYR3	Q15413	4870 aa		6.65	□□□□□ -1.34
KCNMA1-238	ENST00000638514	TNXB	P22105	4242 aa		6.62	□□□□□ -1.35
KCNMA1-238	ENST00000638514		M0R2T5	61 aa		6.62	□□□□□ -1.35
KCNMA1-238	ENST00000638514	SEC61B	P60468	96 aa	Known RBP	6.61	□□□□□ -1.35
KCNMA1-238	ENST00000638514	PLAC4	Q8WY50	150 aa		6.58	□□□□□ -1.36
KCNMA1-238	ENST00000638514	KRTAP17-1	Q9BYP8	105 aa		6.54	□□□□□ -1.36
KCNMA1-238	ENST00000638514	MT1HL1	P0DM35	61 aa		6.54	□□□□□ -1.36
KCNMA1-238	ENST00000638514	LRP2	P98164	4655 aa		6.48	□□□□□ -1.37
KCNMA1-238	ENST00000638514	RYR2	Q92736	4967 aa		6.48	□□□□□ -1.37
KCNMA1-238	ENST00000638514	LPA	P08519	4548 aa		6.37	□□□□□ -1.39
KCNMA1-238	ENST00000638514	EPPK1	P58107	5090 aa	Known RBP	6.31	□□□□□ -1.4
KCNMA1-238	ENST00000638514	PP632	Q6XCG6	107 aa		6.3	□□□□□ -1.4
KCNMA1-238	ENST00000638514	LOR	P23490	312 aa	Predicted RBP	6.28	□□□□□ -1.4
KCNMA1-238	ENST00000638514	HERC2	O95714	4834 aa		6.22	□□□□□ -1.41
KCNMA1-238	ENST00000638514	MUC2	Q02817	5179 aa		6.2	□□□□□ -1.42
KCNMA1-238	ENST00000638514	ABCA13	Q86UQ4	5058 aa		6.17	□□□□□ -1.42
KCNMA1-238	ENST00000638514	KRTAP4-1	Q9BYQ7	146 aa		6.16	□□□□□ -1.42
KCNMA1-238	ENST00000638514	TNP1	P09430	55 aa		6.14	□□□□□ -1.43
KCNMA1-238	ENST00000638514	KRTAP10-10	P60014	251 aa		6.05	□□□□□ -1.44
KCNMA1-238	ENST00000638514	MUC17	Q685J3	4493 aa		6.02	□□□□□ -1.44
KCNMA1-238	ENST00000638514	RNF213	Q63HN8	5207 aa		6	□□□□□ -1.45
KCNMA1-238	ENST00000638514	SPRR5	A0A1B0GTR4	108 aa		5.99	□□□□□ -1.45
KCNMA1-238	ENST00000638514	HERC1	Q15751	4861 aa		5.97	□□□□□ -1.45
KCNMA1-238	ENST00000638514	KRTAP23-1	A1A580	65 aa		5.97	□□□□□ -1.45
KCNMA1-238	ENST00000638514	FAT4	Q6V0I7	4981 aa		5.92	□□□□□ -1.46
KCNMA1-238	ENST00000638514	KRTAP19-2	Q3LHN2	52 aa		5.89	□□□□□ -1.47
KCNMA1-238	ENST00000638514	PRO2289	Q9P1D8	64 aa		5.89	□□□□□ -1.47
KCNMA1-238	ENST00000638514	PCLO	Q9Y6V0	5065 aa		5.89	□□□□□ -1.47
KCNMA1-238	ENST00000638514	UBR4	Q5T4S7	5183 aa		5.77	□□□□□ -1.49
KCNMA1-238	ENST00000638514	FLG	P20930	4061 aa	Predicted RBP	5.73	□□□□□ -1.49
KCNMA1-238	ENST00000638514	BIRC6	Q9NR09	4857 aa		5.7	□□□□□ -1.5
KCNMA1-238	ENST00000638514	INE1	O15225	51 aa		5.66	□□□□□ -1.5
KCNMA1-238	ENST00000638514	FSIP2	Q5CZC0	6907 aa		5.64	□□□□□ -1.51
KCNMA1-238	ENST00000638514	LCE3A	Q5TA76	89 aa		5.63	□□□□□ -1.51
KCNMA1-238	ENST00000638514	SPRR2G	Q9BYE4	73 aa		5.57	□□□□□ -1.52
KCNMA1-238	ENST00000638514	HMCN2	Q8NDA2	5059 aa		5.55	□□□□□ -1.52
KCNMA1-238	ENST00000638514	MT1H	P80294	61 aa		5.53	□□□□□ -1.52
KCNMA1-238	ENST00000638514	KRTAP19-1	Q8IUB9	90 aa		5.52	□□□□□ -1.53
KCNMA1-238	ENST00000638514	MT1F	P04733	61 aa		5.5	□□□□□ -1.53
KCNMA1-238	ENST00000638514	KRTAP8-1	Q8IUC2	63 aa		5.47	□□□□□ -1.53
KCNMA1-238	ENST00000638514	MT2A	P02795	61 aa		5.46	□□□□□ -1.53
KCNMA1-238	ENST00000638514	LCE2C	Q5TA81	110 aa		5.4	□□□□□ -1.54
KCNMA1-238	ENST00000638514	USH2A	O75445	5202 aa		5.36	□□□□□ -1.55
KCNMA1-238	ENST00000638514	KRTAP12-3	P60328	96 aa		5.34	□□□□□ -1.55
KCNMA1-238	ENST00000638514	KRTAP10-12	P60413	245 aa		5.32	□□□□□ -1.56
KCNMA1-238	ENST00000638514	KRTAP10-5	P60370	271 aa		5.25	□□□□□ -1.57
KCNMA1-238	ENST00000638514	KRTAP19-8	Q3LI54	63 aa		5.25	□□□□□ -1.57
KCNMA1-238	ENST00000638514	MT1X	P80297	61 aa		5.24	□□□□□ -1.57
KCNMA1-238	ENST00000638514	KRTAP9-8	Q9BYQ0	159 aa		5.23	□□□□□ -1.57
KCNMA1-238	ENST00000638514	KMT2D	O14686	5537 aa		5.19	□□□□□ -1.58
KCNMA1-238	ENST00000638514	MT1B	P07438	61 aa		5.18	□□□□□ -1.58
KCNMA1-238	ENST00000638514	KRTAP10-7	P60409	375 aa	Predicted RBP	5.17	□□□□□ -1.58
KCNMA1-238	ENST00000638514	OBSCN	Q5VST9	7968 aa		5.12	□□□□□ -1.59
KCNMA1-238	ENST00000638514	CRCT1	Q9UGL9	99 aa		5.12	□□□□□ -1.59
KCNMA1-238	ENST00000638514	KRTAP4-8	A0A0G2JLE6	195 aa		5.07	□□□□□ -1.6
KCNMA1-238	ENST00000638514	KRTAP4-8	Q9BYQ9	185 aa		5.07	□□□□□ -1.6
KCNMA1-238	ENST00000638514	LCE3C	Q5T5A8	94 aa		5.04	□□□□□ -1.6
KCNMA1-238	ENST00000638514	KRTAP19-5	Q3LI72	72 aa		5	□□□□□ -1.61
KCNMA1-238	ENST00000638514	DST	Q03001	7570 aa	Known RBP	5	□□□□□ -1.61
KCNMA1-238	ENST00000638514	KRTAP9-3	Q9BYQ3	159 aa		4.99	□□□□□ -1.61
KCNMA1-238	ENST00000638514	LCE2B	O14633	110 aa		4.96	□□□□□ -1.61
KCNMA1-238	ENST00000638514	SYNE1	Q8NF91	8797 aa	Known RBP	4.93	□□□□□ -1.62
KCNMA1-238	ENST00000638514	KRTAP9-6	A8MVA2	160 aa		4.88	□□□□□ -1.63
KCNMA1-238	ENST00000638514	KRTAP4-7	Q9BYR0	210 aa		4.86	□□□□□ -1.63
KCNMA1-238	ENST00000638514	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.86	□□□□□ -1.63
KCNMA1-238	ENST00000638514	KRTAP2-3	P0C7H8	128 aa		4.85	□□□□□ -1.63
KCNMA1-238	ENST00000638514	KRTAP2-4	Q9BYR9	128 aa		4.85	□□□□□ -1.63
KCNMA1-238	ENST00000638514	KRTAP2-1	Q9BYU5	128 aa		4.85	□□□□□ -1.63
KCNMA1-238	ENST00000638514	MUC12	Q9UKN1	5478 aa		4.69	□□□□□ -1.66

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