RNA–Protein interactions for RNA: ENST00000638203.1

KCNMA1-227, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-227ENST00000638203 PKD1P98161 4303 aa6.91□□□□□ -1.3
KCNMA1-227ENST00000638203 PKHD1P08F94 4074 aa6.9□□□□□ -1.3
KCNMA1-227ENST00000638203 C20orf166-AS1Q96NR2 134 aa6.88□□□□□ -1.31
KCNMA1-227ENST00000638203 MYCBP2O75592 4640 aa6.87□□□□□ -1.31
KCNMA1-227ENST00000638203 KRTAP3-1Q9BYR8 98 aa6.84□□□□□ -1.31
KCNMA1-227ENST00000638203 A0A1B0GVY2 172 aa6.82□□□□□ -1.32
KCNMA1-227ENST00000638203 M0R2T5 61 aa6.8□□□□□ -1.32
KCNMA1-227ENST00000638203 SACSQ9NZJ4 4579 aa6.79□□□□□ -1.32
KCNMA1-227ENST00000638203 A0A0A0MQY5 61 aa6.78□□□□□ -1.32
KCNMA1-227ENST00000638203 KRTAP10-4P60372 401 aaPredicted RBP6.78□□□□□ -1.32
KCNMA1-227ENST00000638203 P0C880 135 aa6.77□□□□□ -1.33
KCNMA1-227ENST00000638203 KRTAP10-8P60410 259 aa6.71□□□□□ -1.34
KCNMA1-227ENST00000638203 XP32Q5T750 250 aa6.69□□□□□ -1.34
KCNMA1-227ENST00000638203 DYNC1H1Q14204 4646 aaKnown RBP6.65□□□□□ -1.34
KCNMA1-227ENST00000638203 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
KCNMA1-227ENST00000638203 FAT3Q8TDW7 4589 aa6.63□□□□□ -1.35
KCNMA1-227ENST00000638203 PKHD1L1Q86WI1 4243 aa6.62□□□□□ -1.35
KCNMA1-227ENST00000638203 LRP1Q07954 4544 aaKnown RBP6.61□□□□□ -1.35
KCNMA1-227ENST00000638203 APOBP04114 4563 aaKnown RBP6.6□□□□□ -1.35
KCNMA1-227ENST00000638203 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
KCNMA1-227ENST00000638203 HSPG2P98160 4391 aa6.55□□□□□ -1.36
KCNMA1-227ENST00000638203 LPAP08519 4548 aa6.54□□□□□ -1.36
KCNMA1-227ENST00000638203 KRTAP12-2P59991 146 aa6.54□□□□□ -1.36
KCNMA1-227ENST00000638203 SEC61BP60468 96 aaKnown RBP6.51□□□□□ -1.37
KCNMA1-227ENST00000638203 TPRXLQ17RH7 258 aa6.51□□□□□ -1.37
KCNMA1-227ENST00000638203 KRTAP10-6P60371 365 aaPredicted RBP6.51□□□□□ -1.37
KCNMA1-227ENST00000638203 KIAA1109Q2LD37 5005 aa6.46□□□□□ -1.38
KCNMA1-227ENST00000638203 KRTAP3-3Q9BYR6 98 aa6.44□□□□□ -1.38
KCNMA1-227ENST00000638203 RYR1P21817 5038 aa6.43□□□□□ -1.38
KCNMA1-227ENST00000638203 RYR2Q92736 4967 aa6.4□□□□□ -1.38
KCNMA1-227ENST00000638203 KMT2CQ8NEZ4 4911 aaKnown RBP6.39□□□□□ -1.39
KCNMA1-227ENST00000638203 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
KCNMA1-227ENST00000638203 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
KCNMA1-227ENST00000638203 TNXBP22105 4242 aa6.34□□□□□ -1.39
KCNMA1-227ENST00000638203 MT1HL1P0DM35 61 aa6.33□□□□□ -1.4
KCNMA1-227ENST00000638203 LRP2P98164 4655 aa6.3□□□□□ -1.4
KCNMA1-227ENST00000638203 RYR3Q15413 4870 aa6.28□□□□□ -1.4
KCNMA1-227ENST00000638203 TNP1P09430 55 aa6.28□□□□□ -1.4
KCNMA1-227ENST00000638203 KRTAP4-5Q9BYR2 181 aa6.27□□□□□ -1.41
KCNMA1-227ENST00000638203 KRTAP17-1Q9BYP8 105 aa6.19□□□□□ -1.42
KCNMA1-227ENST00000638203 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
KCNMA1-227ENST00000638203 ABCA13Q86UQ4 5058 aa6.16□□□□□ -1.42
KCNMA1-227ENST00000638203 MUC2Q02817 5179 aa6.08□□□□□ -1.44
KCNMA1-227ENST00000638203 EPPK1P58107 5090 aaKnown RBP6.02□□□□□ -1.45
KCNMA1-227ENST00000638203 PP632Q6XCG6 107 aa6.01□□□□□ -1.45
KCNMA1-227ENST00000638203 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
KCNMA1-227ENST00000638203 KRTAP10-10P60014 251 aa5.96□□□□□ -1.46
KCNMA1-227ENST00000638203 KRTAP4-1Q9BYQ7 146 aa5.95□□□□□ -1.46
KCNMA1-227ENST00000638203 HERC2O95714 4834 aa5.83□□□□□ -1.48
KCNMA1-227ENST00000638203 BIRC6Q9NR09 4857 aa5.79□□□□□ -1.48
KCNMA1-227ENST00000638203 KRTAP19-2Q3LHN2 52 aa5.73□□□□□ -1.49
KCNMA1-227ENST00000638203 MUC17Q685J3 4493 aa5.73□□□□□ -1.49
KCNMA1-227ENST00000638203 FAT4Q6V0I7 4981 aa5.69□□□□□ -1.5
KCNMA1-227ENST00000638203 PCLOQ9Y6V0 5065 aa5.67□□□□□ -1.5
KCNMA1-227ENST00000638203 RNF213Q63HN8 5207 aa5.65□□□□□ -1.5
KCNMA1-227ENST00000638203 HERC1Q15751 4861 aa5.6□□□□□ -1.51
KCNMA1-227ENST00000638203 FLGP20930 4061 aaPredicted RBP5.52□□□□□ -1.53
KCNMA1-227ENST00000638203 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
KCNMA1-227ENST00000638203 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
KCNMA1-227ENST00000638203 PRO2289Q9P1D8 64 aa5.45□□□□□ -1.54
KCNMA1-227ENST00000638203 OBSCNQ5VST9 7968 aa5.43□□□□□ -1.54
KCNMA1-227ENST00000638203 HMCN2Q8NDA2 5059 aa5.42□□□□□ -1.54
KCNMA1-227ENST00000638203 UBR4Q5T4S7 5183 aa5.41□□□□□ -1.54
KCNMA1-227ENST00000638203 SPRR2GQ9BYE4 73 aa5.4□□□□□ -1.54
KCNMA1-227ENST00000638203 LCE2CQ5TA81 110 aa5.39□□□□□ -1.55
KCNMA1-227ENST00000638203 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
KCNMA1-227ENST00000638203 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
KCNMA1-227ENST00000638203 FSIP2Q5CZC0 6907 aa5.34□□□□□ -1.55
KCNMA1-227ENST00000638203 MT1FP04733 61 aa5.3□□□□□ -1.56
KCNMA1-227ENST00000638203 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
KCNMA1-227ENST00000638203 MT1HP80294 61 aa5.28□□□□□ -1.56
KCNMA1-227ENST00000638203 KRTAP10-12P60413 245 aa5.28□□□□□ -1.56
KCNMA1-227ENST00000638203 MT2AP02795 61 aa5.26□□□□□ -1.57
KCNMA1-227ENST00000638203 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
KCNMA1-227ENST00000638203 SPRR5A0A1B0GTR4 108 aa5.17□□□□□ -1.58
KCNMA1-227ENST00000638203 KRTAP19-8Q3LI54 63 aa5.17□□□□□ -1.58
KCNMA1-227ENST00000638203 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.59
KCNMA1-227ENST00000638203 KMT2DO14686 5537 aa5.15□□□□□ -1.59
KCNMA1-227ENST00000638203 INE1O15225 51 aa5.13□□□□□ -1.59
KCNMA1-227ENST00000638203 USH2AO75445 5202 aa5.13□□□□□ -1.59
KCNMA1-227ENST00000638203 KRTAP10-7P60409 375 aaPredicted RBP5.08□□□□□ -1.6
KCNMA1-227ENST00000638203 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
KCNMA1-227ENST00000638203 MT1BP07438 61 aa5.03□□□□□ -1.6
KCNMA1-227ENST00000638203 KRTAP10-5P60370 271 aa4.99□□□□□ -1.61
KCNMA1-227ENST00000638203 MT1XP80297 61 aa4.99□□□□□ -1.61
KCNMA1-227ENST00000638203 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
KCNMA1-227ENST00000638203 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
KCNMA1-227ENST00000638203 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
KCNMA1-227ENST00000638203 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
KCNMA1-227ENST00000638203 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
KCNMA1-227ENST00000638203 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
KCNMA1-227ENST00000638203 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
KCNMA1-227ENST00000638203 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
KCNMA1-227ENST00000638203 LCE2BO14633 110 aa4.72□□□□□ -1.65
KCNMA1-227ENST00000638203 LCE2AQ5TA79 106 aaPredicted RBP4.65□□□□□ -1.67
KCNMA1-227ENST00000638203 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
KCNMA1-227ENST00000638203 MUC12Q9UKN1 5478 aa4.51□□□□□ -1.69
KCNMA1-227ENST00000638203 LCE2DQ5TA82 110 aaPredicted RBP4.51□□□□□ -1.69
KCNMA1-227ENST00000638203 MT1GP13640 62 aa4.49□□□□□ -1.69
KCNMA1-227ENST00000638203 KRTAP4-3Q9BYR4 195 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms