RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 MEGF8Q7Z7M0 2845 aa2.87□□□□□ -1.95
PDE4D-228ENST00000636120 INE1O15225 51 aa2.86□□□□□ -1.95
PDE4D-228ENST00000636120 KRTAP10-12P60413 245 aa2.84□□□□□ -1.95
PDE4D-228ENST00000636120 ZNF469Q96JG9 3925 aaPredicted RBP2.83□□□□□ -1.96
PDE4D-228ENST00000636120 PLECQ15149 4684 aaKnown RBP2.83□□□□□ -1.96
PDE4D-228ENST00000636120 DNAH11Q96DT5 4516 aa2.83□□□□□ -1.96
PDE4D-228ENST00000636120 FBN3Q75N90 2809 aa2.82□□□□□ -1.96
PDE4D-228ENST00000636120 DYNC2H1Q8NCM8 4307 aaKnown RBP2.82□□□□□ -1.96
PDE4D-228ENST00000636120 ANK2Q01484 3957 aa2.81□□□□□ -1.96
PDE4D-228ENST00000636120 CMYA5Q8N3K9 4069 aa2.8□□□□□ -1.96
PDE4D-228ENST00000636120 DNAH8Q96JB1 4490 aa2.79□□□□□ -1.96
PDE4D-228ENST00000636120 DNAH5Q8TE73 4624 aa2.79□□□□□ -1.96
PDE4D-228ENST00000636120 FAT2Q9NYQ8 4349 aa2.77□□□□□ -1.97
PDE4D-228ENST00000636120 DYNC1H1Q14204 4646 aaKnown RBP2.75□□□□□ -1.97
PDE4D-228ENST00000636120 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
PDE4D-228ENST00000636120 LORP23490 312 aaPredicted RBP2.74□□□□□ -1.97
PDE4D-228ENST00000636120 DNAH7Q8WXX0 4024 aa2.73□□□□□ -1.97
PDE4D-228ENST00000636120 SACSQ9NZJ4 4579 aa2.73□□□□□ -1.97
PDE4D-228ENST00000636120 LCE3AQ5TA76 89 aa2.73□□□□□ -1.97
PDE4D-228ENST00000636120 STARD9Q9P2P6 4700 aa2.72□□□□□ -1.97
PDE4D-228ENST00000636120 PRKDCP78527 4128 aaKnown RBP2.71□□□□□ -1.98
PDE4D-228ENST00000636120 KRTAP4-1Q9BYQ7 146 aa2.7□□□□□ -1.98
PDE4D-228ENST00000636120 SRRM2Q9UQ35 2752 aaKnown RBP2.69□□□□□ -1.98
PDE4D-228ENST00000636120 LRP1BQ9NZR2 4599 aa2.69□□□□□ -1.98
PDE4D-228ENST00000636120 MT1HP80294 61 aa2.69□□□□□ -1.98
PDE4D-228ENST00000636120 SPRR2GQ9BYE4 73 aa2.66□□□□□ -1.98
PDE4D-228ENST00000636120 COL7A1Q02388 2944 aa2.66□□□□□ -1.98
PDE4D-228ENST00000636120 MT2AP02795 61 aa2.62□□□□□ -1.99
PDE4D-228ENST00000636120 KMT2AQ03164 3969 aa2.61□□□□□ -1.99
PDE4D-228ENST00000636120 VPS13BQ7Z7G8 4022 aa2.61□□□□□ -1.99
PDE4D-228ENST00000636120 HECTD4Q9Y4D8 3996 aa2.61□□□□□ -1.99
PDE4D-228ENST00000636120 KRTAP8-1Q8IUC2 63 aa2.61□□□□□ -1.99
PDE4D-228ENST00000636120 CSMD3Q7Z407 3707 aa2.6□□□□□ -1.99
PDE4D-228ENST00000636120 CRCT1Q9UGL9 99 aa2.58□□□□□ -2
PDE4D-228ENST00000636120 FAT1Q14517 4588 aa2.57□□□□□ -2
PDE4D-228ENST00000636120 MT1FP04733 61 aa2.56□□□□□ -2
PDE4D-228ENST00000636120 KRTAP19-4Q3LI73 84 aa2.55□□□□□ -2
PDE4D-228ENST00000636120 APOBP04114 4563 aaKnown RBP2.54□□□□□ -2
PDE4D-228ENST00000636120 HSPG2P98160 4391 aa2.54□□□□□ -2
PDE4D-228ENST00000636120 FRAS1Q86XX4 4008 aa2.54□□□□□ -2
PDE4D-228ENST00000636120 PKHD1L1Q86WI1 4243 aa2.53□□□□□ -2
PDE4D-228ENST00000636120 DNHD1Q96M86 4753 aa2.53□□□□□ -2
PDE4D-228ENST00000636120 FAT3Q8TDW7 4589 aa2.51□□□□□ -2.01
PDE4D-228ENST00000636120 LYSTQ99698 3801 aa2.5□□□□□ -2.01
PDE4D-228ENST00000636120 KRTAP19-8Q3LI54 63 aa2.49□□□□□ -2.01
PDE4D-228ENST00000636120 HERC1Q15751 4861 aa2.49□□□□□ -2.01
PDE4D-228ENST00000636120 RYR2Q92736 4967 aa2.48□□□□□ -2.01
PDE4D-228ENST00000636120 KRTAP17-1Q9BYP8 105 aa2.48□□□□□ -2.01
PDE4D-228ENST00000636120 KRTAP19-5Q3LI72 72 aa2.46□□□□□ -2.01
PDE4D-228ENST00000636120 RYR3Q15413 4870 aa2.46□□□□□ -2.02
PDE4D-228ENST00000636120 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
PDE4D-228ENST00000636120 RYR1P21817 5038 aa2.44□□□□□ -2.02
PDE4D-228ENST00000636120 MYCBP2O75592 4640 aa2.44□□□□□ -2.02
PDE4D-228ENST00000636120 KRTAP10-5P60370 271 aa2.43□□□□□ -2.02
PDE4D-228ENST00000636120 PKD1P98161 4303 aa2.43□□□□□ -2.02
PDE4D-228ENST00000636120 KRTAP19-1Q8IUB9 90 aa2.43□□□□□ -2.02
PDE4D-228ENST00000636120 MUC17Q685J3 4493 aa2.41□□□□□ -2.02
PDE4D-228ENST00000636120 PKHD1P08F94 4074 aa2.4□□□□□ -2.03
PDE4D-228ENST00000636120 KRTAP10-7P60409 375 aaPredicted RBP2.4□□□□□ -2.03
PDE4D-228ENST00000636120 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.03
PDE4D-228ENST00000636120 TNXBP22105 4242 aa2.39□□□□□ -2.03
PDE4D-228ENST00000636120 KRTAP9-8Q9BYQ0 159 aa2.38□□□□□ -2.03
PDE4D-228ENST00000636120 MT1XP80297 61 aa2.38□□□□□ -2.03
PDE4D-228ENST00000636120 LRP1Q07954 4544 aaKnown RBP2.37□□□□□ -2.03
PDE4D-228ENST00000636120 HYDINQ4G0P3 5121 aa2.37□□□□□ -2.03
PDE4D-228ENST00000636120 MT1BP07438 61 aa2.36□□□□□ -2.03
PDE4D-228ENST00000636120 LCE2CQ5TA81 110 aa2.36□□□□□ -2.03
PDE4D-228ENST00000636120 KRTAP9-3Q9BYQ3 159 aa2.33□□□□□ -2.04
PDE4D-228ENST00000636120 BIRC6Q9NR09 4857 aa2.31□□□□□ -2.04
PDE4D-228ENST00000636120 SPRR2EP22531 72 aa2.29□□□□□ -2.04
PDE4D-228ENST00000636120 SPRR2BP35325 72 aa2.29□□□□□ -2.04
PDE4D-228ENST00000636120 SPRR2AP35326 72 aa2.29□□□□□ -2.04
PDE4D-228ENST00000636120 SPRR5A0A1B0GTR4 108 aa2.28□□□□□ -2.04
PDE4D-228ENST00000636120 KRTAP19-2Q3LHN2 52 aa2.27□□□□□ -2.05
PDE4D-228ENST00000636120 KIAA1109Q2LD37 5005 aa2.25□□□□□ -2.05
PDE4D-228ENST00000636120 MT1GP13640 62 aa2.25□□□□□ -2.05
PDE4D-228ENST00000636120 FLGP20930 4061 aaPredicted RBP2.23□□□□□ -2.05
PDE4D-228ENST00000636120 LPAP08519 4548 aa2.22□□□□□ -2.05
PDE4D-228ENST00000636120 LCE2BO14633 110 aa2.22□□□□□ -2.05
PDE4D-228ENST00000636120 SPRR2DP22532 72 aa2.22□□□□□ -2.05
PDE4D-228ENST00000636120 HERC2O95714 4834 aa2.21□□□□□ -2.06
PDE4D-228ENST00000636120 MT3P25713 68 aa2.19□□□□□ -2.06
PDE4D-228ENST00000636120 KRTAP4-8A0A0G2JLE6 195 aa2.19□□□□□ -2.06
PDE4D-228ENST00000636120 KRTAP4-8Q9BYQ9 185 aa2.19□□□□□ -2.06
PDE4D-228ENST00000636120 LRP2P98164 4655 aa2.17□□□□□ -2.06
PDE4D-228ENST00000636120 KRTAP19-3Q7Z4W3 81 aa2.17□□□□□ -2.06
PDE4D-228ENST00000636120 LCE3BQ5TA77 95 aa2.16□□□□□ -2.06
PDE4D-228ENST00000636120 KRTAP12-4P60329 112 aa2.15□□□□□ -2.06
PDE4D-228ENST00000636120 KRTAP19-6Q3LI70 58 aa2.15□□□□□ -2.06
PDE4D-228ENST00000636120 MT1LQ93083 61 aa2.15□□□□□ -2.07
PDE4D-228ENST00000636120 MT1EP04732 61 aa2.15□□□□□ -2.07
PDE4D-228ENST00000636120 KMT2CQ8NEZ4 4911 aaKnown RBP2.14□□□□□ -2.07
PDE4D-228ENST00000636120 LCE2DQ5TA82 110 aaPredicted RBP2.12□□□□□ -2.07
PDE4D-228ENST00000636120 LCE2AQ5TA79 106 aaPredicted RBP2.08□□□□□ -2.08
PDE4D-228ENST00000636120 PCLOQ9Y6V0 5065 aa2.08□□□□□ -2.08
PDE4D-228ENST00000636120 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
PDE4D-228ENST00000636120 MT1MQ8N339 61 aa2.07□□□□□ -2.08
PDE4D-228ENST00000636120 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
PDE4D-228ENST00000636120 KRTAP4-7Q9BYR0 210 aa2.03□□□□□ -2.08
PDE4D-228ENST00000636120 EPPK1P58107 5090 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms