RNA–Protein interactions for RNA: ENST00000635990.2

TCF4-277, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,396 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-277ENST00000635990 INE1O15225 51 aa2.98□□□□□ -1.93
TCF4-277ENST00000635990 DNAH9Q9NYC9 4486 aa2.98□□□□□ -1.93
TCF4-277ENST00000635990 DNAH1Q9P2D7 4330 aa2.96□□□□□ -1.94
TCF4-277ENST00000635990 VPS13BQ7Z7G8 4022 aa2.96□□□□□ -1.94
TCF4-277ENST00000635990 DNAH3Q8TD57 4116 aa2.95□□□□□ -1.94
TCF4-277ENST00000635990 PRKDCP78527 4128 aaKnown RBP2.95□□□□□ -1.94
TCF4-277ENST00000635990 KRTAP13-4Q3LI77 160 aa2.91□□□□□ -1.94
TCF4-277ENST00000635990 DNAH7Q8WXX0 4024 aa2.9□□□□□ -1.94
TCF4-277ENST00000635990 KRTAP12-1P59990 96 aa2.9□□□□□ -1.95
TCF4-277ENST00000635990 DNAH10Q8IVF4 4471 aa2.89□□□□□ -1.95
TCF4-277ENST00000635990 KRTAP3-1Q9BYR8 98 aa2.88□□□□□ -1.95
TCF4-277ENST00000635990 KRTAP10-12P60413 245 aa2.87□□□□□ -1.95
TCF4-277ENST00000635990 DNAH2Q9P225 4427 aa2.87□□□□□ -1.95
TCF4-277ENST00000635990 DNAH6Q9C0G6 4158 aa2.87□□□□□ -1.95
TCF4-277ENST00000635990 FAT2Q9NYQ8 4349 aa2.85□□□□□ -1.95
TCF4-277ENST00000635990 KRTAP8-1Q8IUC2 63 aa2.85□□□□□ -1.95
TCF4-277ENST00000635990 KRTAP10-4P60372 401 aaPredicted RBP2.81□□□□□ -1.96
TCF4-277ENST00000635990 KRTAP3-3Q9BYR6 98 aa2.78□□□□□ -1.96
TCF4-277ENST00000635990 KRTAP3-2Q9BYR7 98 aa2.78□□□□□ -1.96
TCF4-277ENST00000635990 HECTD4Q9Y4D8 3996 aa2.77□□□□□ -1.97
TCF4-277ENST00000635990 STARD9Q9P2P6 4700 aa2.76□□□□□ -1.97
TCF4-277ENST00000635990 BIRC6Q9NR09 4857 aa2.75□□□□□ -1.97
TCF4-277ENST00000635990 PLECQ15149 4684 aaKnown RBP2.74□□□□□ -1.97
TCF4-277ENST00000635990 KRTAP10-6P60371 365 aaPredicted RBP2.73□□□□□ -1.97
TCF4-277ENST00000635990 DNHD1Q96M86 4753 aa2.73□□□□□ -1.97
TCF4-277ENST00000635990 MT1HP80294 61 aa2.72□□□□□ -1.97
TCF4-277ENST00000635990 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
TCF4-277ENST00000635990 SPRR2FQ96RM1 72 aa2.72□□□□□ -1.97
TCF4-277ENST00000635990 VPS13DQ5THJ4 4388 aa2.72□□□□□ -1.97
TCF4-277ENST00000635990 DNAH11Q96DT5 4516 aa2.71□□□□□ -1.97
TCF4-277ENST00000635990 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
TCF4-277ENST00000635990 DYNC2H1Q8NCM8 4307 aaKnown RBP2.7□□□□□ -1.98
TCF4-277ENST00000635990 DNAH17Q9UFH2 4485 aa2.7□□□□□ -1.98
TCF4-277ENST00000635990 KRTAP4-1Q9BYQ7 146 aa2.7□□□□□ -1.98
TCF4-277ENST00000635990 PCLOQ9Y6V0 5065 aa2.69□□□□□ -1.98
TCF4-277ENST00000635990 KRTAP10-5P60370 271 aa2.67□□□□□ -1.98
TCF4-277ENST00000635990 KRTAP17-1Q9BYP8 105 aa2.66□□□□□ -1.98
TCF4-277ENST00000635990 PKHD1P08F94 4074 aa2.66□□□□□ -1.98
TCF4-277ENST00000635990 LRP1BQ9NZR2 4599 aa2.65□□□□□ -1.98
TCF4-277ENST00000635990 KIAA1109Q2LD37 5005 aa2.64□□□□□ -1.99
TCF4-277ENST00000635990 DNAH5Q8TE73 4624 aa2.63□□□□□ -1.99
TCF4-277ENST00000635990 SPRR2EP22531 72 aa2.63□□□□□ -1.99
TCF4-277ENST00000635990 SPRR2BP35325 72 aa2.63□□□□□ -1.99
TCF4-277ENST00000635990 SPRR2AP35326 72 aa2.63□□□□□ -1.99
TCF4-277ENST00000635990 KRTAP10-7P60409 375 aaPredicted RBP2.6□□□□□ -1.99
TCF4-277ENST00000635990 HYDINQ4G0P3 5121 aa2.6□□□□□ -1.99
TCF4-277ENST00000635990 RYR2Q92736 4967 aa2.58□□□□□ -2
TCF4-277ENST00000635990 MT2AP02795 61 aa2.58□□□□□ -2
TCF4-277ENST00000635990 DNAH8Q96JB1 4490 aa2.58□□□□□ -2
TCF4-277ENST00000635990 HSPG2P98160 4391 aa2.56□□□□□ -2
TCF4-277ENST00000635990 LPAP08519 4548 aa2.56□□□□□ -2
TCF4-277ENST00000635990 MT1FP04733 61 aa2.55□□□□□ -2
TCF4-277ENST00000635990 RYR3Q15413 4870 aa2.55□□□□□ -2
TCF4-277ENST00000635990 FAT1Q14517 4588 aa2.55□□□□□ -2
TCF4-277ENST00000635990 FAT3Q8TDW7 4589 aa2.54□□□□□ -2
TCF4-277ENST00000635990 HERC2O95714 4834 aa2.54□□□□□ -2
TCF4-277ENST00000635990 SPRR2DP22532 72 aa2.53□□□□□ -2
TCF4-277ENST00000635990 ABCA13Q86UQ4 5058 aa2.52□□□□□ -2.01
TCF4-277ENST00000635990 HERC1Q15751 4861 aa2.51□□□□□ -2.01
TCF4-277ENST00000635990 PKHD1L1Q86WI1 4243 aa2.51□□□□□ -2.01
TCF4-277ENST00000635990 KRTAP19-5Q3LI72 72 aa2.49□□□□□ -2.01
TCF4-277ENST00000635990 SACSQ9NZJ4 4579 aa2.49□□□□□ -2.01
TCF4-277ENST00000635990 PKD1P98161 4303 aa2.48□□□□□ -2.01
TCF4-277ENST00000635990 TNXBP22105 4242 aa2.47□□□□□ -2.01
TCF4-277ENST00000635990 KMT2CQ8NEZ4 4911 aaKnown RBP2.46□□□□□ -2.02
TCF4-277ENST00000635990 LCE2BO14633 110 aa2.46□□□□□ -2.02
TCF4-277ENST00000635990 DYNC1H1Q14204 4646 aaKnown RBP2.46□□□□□ -2.02
TCF4-277ENST00000635990 SPRR2GQ9BYE4 73 aa2.43□□□□□ -2.02
TCF4-277ENST00000635990 KRTAP19-1Q8IUB9 90 aa2.43□□□□□ -2.02
TCF4-277ENST00000635990 LRP1Q07954 4544 aaKnown RBP2.43□□□□□ -2.02
TCF4-277ENST00000635990 FLGP20930 4061 aaPredicted RBP2.41□□□□□ -2.02
TCF4-277ENST00000635990 KRTAP9-2Q9BYQ4 174 aa2.41□□□□□ -2.02
TCF4-277ENST00000635990 EPPK1P58107 5090 aaKnown RBP2.39□□□□□ -2.03
TCF4-277ENST00000635990 APOBP04114 4563 aaKnown RBP2.39□□□□□ -2.03
TCF4-277ENST00000635990 LCE3BQ5TA77 95 aa2.38□□□□□ -2.03
TCF4-277ENST00000635990 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
TCF4-277ENST00000635990 MYCBP2O75592 4640 aa2.36□□□□□ -2.03
TCF4-277ENST00000635990 RNF213Q63HN8 5207 aa2.35□□□□□ -2.03
TCF4-277ENST00000635990 LCE2CQ5TA81 110 aa2.35□□□□□ -2.03
TCF4-277ENST00000635990 MT1GP13640 62 aa2.34□□□□□ -2.03
TCF4-277ENST00000635990 MT4P47944 62 aa2.34□□□□□ -2.03
TCF4-277ENST00000635990 LCE3CQ5T5A8 94 aa2.34□□□□□ -2.04
TCF4-277ENST00000635990 KRTAP4-8A0A0G2JLE6 195 aa2.33□□□□□ -2.04
TCF4-277ENST00000635990 KRTAP4-8Q9BYQ9 185 aa2.33□□□□□ -2.04
TCF4-277ENST00000635990 UBR4Q5T4S7 5183 aa2.33□□□□□ -2.04
TCF4-277ENST00000635990 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
TCF4-277ENST00000635990 KRTAP19-4Q3LI73 84 aa2.32□□□□□ -2.04
TCF4-277ENST00000635990 LCE2DQ5TA82 110 aaPredicted RBP2.31□□□□□ -2.04
TCF4-277ENST00000635990 KRTAP9-6A0A140TA67 174 aa2.3□□□□□ -2.04
TCF4-277ENST00000635990 KRTAP9-8Q9BYQ0 159 aa2.29□□□□□ -2.04
TCF4-277ENST00000635990 HMCN2Q8NDA2 5059 aa2.27□□□□□ -2.05
TCF4-277ENST00000635990 MT3P25713 68 aa2.25□□□□□ -2.05
TCF4-277ENST00000635990 MT1XP80297 61 aa2.25□□□□□ -2.05
TCF4-277ENST00000635990 KRTAP9-3Q9BYQ3 159 aa2.22□□□□□ -2.05
TCF4-277ENST00000635990 MT1BP07438 61 aa2.21□□□□□ -2.06
TCF4-277ENST00000635990 LRP2P98164 4655 aa2.21□□□□□ -2.06
TCF4-277ENST00000635990 KRTAP19-8Q3LI54 63 aa2.2□□□□□ -2.06
TCF4-277ENST00000635990 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
TCF4-277ENST00000635990 KRTAP20-1Q3LI63 56 aa2.18□□□□□ -2.06
TCF4-277ENST00000635990 LCE2AQ5TA79 106 aaPredicted RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms