RNA–Protein interactions for RNA: ENST00000635990.2

TCF4-277, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,396 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-277ENST00000635990 DCAF8L2P0C7V8 631 aa11.86□□□□□ -0.51
TCF4-277ENST00000635990 EHMT2Q96KQ7 1210 aa10.77□□□□□ -0.68
TCF4-277ENST00000635990 SUPT5HO00267 1087 aaKnown RBP10.66□□□□□ -0.7
TCF4-277ENST00000635990 SHROOM4Q9ULL8 1493 aa10.65□□□□□ -0.7
TCF4-277ENST00000635990 NISCHQ9Y2I1 1504 aa10.43□□□□□ -0.74
TCF4-277ENST00000635990 RANGAP1P46060 587 aaPredicted RBP10.35□□□□□ -0.75
TCF4-277ENST00000635990 FAM9AQ8IZU1 332 aaPredicted RBP10.29□□□□□ -0.76
TCF4-277ENST00000635990 TTBK1Q5TCY1 1321 aaPredicted RBP10.28□□□□□ -0.76
TCF4-277ENST00000635990 ATP1B4Q9UN42 357 aaPredicted RBP10.27□□□□□ -0.76
TCF4-277ENST00000635990 APLP2Q06481 763 aa10.16□□□□□ -0.78
TCF4-277ENST00000635990 MYT1LQ9UL68 1186 aa10.07□□□□□ -0.8
TCF4-277ENST00000635990 CHIC1Q5VXU3 224 aa10.05□□□□□ -0.8
TCF4-277ENST00000635990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.91□□□□□ -0.82
TCF4-277ENST00000635990 HNRNPUL2Q1KMD3 747 aaKnown RBP9.91□□□□□ -0.82
TCF4-277ENST00000635990 UBTFP17480 764 aaKnown RBP9.84□□□□□ -0.83
TCF4-277ENST00000635990 PABPN1Q86U42 306 aaKnown RBP eCLIP9.78□□□□□ -0.84
TCF4-277ENST00000635990 TRIM41Q8WV44 630 aa9.76□□□□□ -0.85
TCF4-277ENST00000635990 ABCC9O60706 1549 aa9.74□□□□□ -0.85
TCF4-277ENST00000635990 PCGF6Q9BYE7 350 aa9.72□□□□□ -0.85
TCF4-277ENST00000635990 PPARGC1BQ86YN6 1023 aaKnown RBP9.7□□□□□ -0.86
TCF4-277ENST00000635990 FBLN2P98095 1184 aa9.7□□□□□ -0.86
TCF4-277ENST00000635990 PLPPR3Q6T4P5 718 aa9.68□□□□□ -0.86
TCF4-277ENST00000635990 SLC4A1APQ9BWU0 796 aaKnown RBP9.67□□□□□ -0.86
TCF4-277ENST00000635990 ITGAEP38570 1179 aa9.66□□□□□ -0.86
TCF4-277ENST00000635990 POLR3GLQ9BT43 218 aa9.66□□□□□ -0.86
TCF4-277ENST00000635990 CNGB1Q14028 1251 aaPredicted RBP9.64□□□□□ -0.87
TCF4-277ENST00000635990 MYT1Q01538 1121 aa9.64□□□□□ -0.87
TCF4-277ENST00000635990 CCER1Q8TC90 406 aaPredicted RBP9.53□□□□□ -0.88
TCF4-277ENST00000635990 BCANQ96GW7 911 aa9.53□□□□□ -0.88
TCF4-277ENST00000635990 PELP1Q8IZL8 1130 aaKnown RBP9.48□□□□□ -0.89
TCF4-277ENST00000635990 ARID3CA6NKF2 412 aa9.45□□□□□ -0.9
TCF4-277ENST00000635990 SLC24A1O60721 1099 aa9.43□□□□□ -0.9
TCF4-277ENST00000635990 YTHDC1Q96MU7 727 aaKnown RBP9.35□□□□□ -0.91
TCF4-277ENST00000635990 FAM50AQ14320 339 aaKnown RBP9.34□□□□□ -0.91
TCF4-277ENST00000635990 ESF1Q9H501 851 aaKnown RBP9.32□□□□□ -0.92
TCF4-277ENST00000635990 ERICH6Q7L0X2 663 aa9.31□□□□□ -0.92
TCF4-277ENST00000635990 TRIM52Q96A61 297 aa9.3□□□□□ -0.92
TCF4-277ENST00000635990 P3H3Q8IVL6 736 aa9.29□□□□□ -0.92
TCF4-277ENST00000635990 BCL11AQ9H165 835 aa9.28□□□□□ -0.92
TCF4-277ENST00000635990 SENP3Q9H4L4 574 aaPredicted RBP9.27□□□□□ -0.93
TCF4-277ENST00000635990 PLEKHG5O94827 1062 aa9.26□□□□□ -0.93
TCF4-277ENST00000635990 ZNF326Q5BKZ1 582 aaKnown RBP9.25□□□□□ -0.93
TCF4-277ENST00000635990 SCAF1Q9H7N4 1312 aaKnown RBP9.25□□□□□ -0.93
TCF4-277ENST00000635990 ZNF777Q9ULD5 760 aaPredicted RBP9.24□□□□□ -0.93
TCF4-277ENST00000635990 NPM1P06748 294 aaKnown RBP eCLIP9.23□□□□□ -0.93
TCF4-277ENST00000635990 STAG3Q9UJ98 1225 aa9.22□□□□□ -0.93
TCF4-277ENST00000635990 A0A0G2JS52 829 aa9.22□□□□□ -0.93
TCF4-277ENST00000635990 LOC105371045A0A1W2PR82 267 aa9.22□□□□□ -0.93
TCF4-277ENST00000635990 TRHP20396 242 aaPredicted RBP9.2□□□□□ -0.94
TCF4-277ENST00000635990 CHGAP10645 457 aaKnown RBP9.19□□□□□ -0.94
TCF4-277ENST00000635990 NEFLP07196 543 aa9.19□□□□□ -0.94
TCF4-277ENST00000635990 NEUROD1Q13562 356 aa9.17□□□□□ -0.94
TCF4-277ENST00000635990 SCRIBQ14160 1630 aa9.16□□□□□ -0.94
TCF4-277ENST00000635990 ARID4BQ4LE39 1312 aaPredicted RBP9.1□□□□□ -0.95
TCF4-277ENST00000635990 ZBTB7CA1YPR0 619 aa9.09□□□□□ -0.95
TCF4-277ENST00000635990 CENPBP07199 599 aaPredicted RBP9.08□□□□□ -0.96
TCF4-277ENST00000635990 DAXXQ9UER7 740 aaPredicted RBP9.07□□□□□ -0.96
TCF4-277ENST00000635990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.06□□□□□ -0.96
TCF4-277ENST00000635990 CLSPNQ9HAW4 1339 aa9.05□□□□□ -0.96
TCF4-277ENST00000635990 C14orf37Q86TY3 774 aa9.05□□□□□ -0.96
TCF4-277ENST00000635990 CHMP7Q8WUX9 453 aaPredicted RBP9.04□□□□□ -0.96
TCF4-277ENST00000635990 ZEB1P37275 1124 aaPredicted RBP9.04□□□□□ -0.96
TCF4-277ENST00000635990 KCNH8Q96L42 1107 aa9.03□□□□□ -0.96
TCF4-277ENST00000635990 ERCC6Q03468 1493 aa9.01□□□□□ -0.97
TCF4-277ENST00000635990 HAP1P54257 671 aaPredicted RBP8.98□□□□□ -0.97
TCF4-277ENST00000635990 NEFMP07197 916 aa8.97□□□□□ -0.97
TCF4-277ENST00000635990 ZBTB47Q9UFB7 747 aaPredicted RBP8.96□□□□□ -0.97
TCF4-277ENST00000635990 TRIM26Q12899 539 aaPredicted RBP8.94□□□□□ -0.98
TCF4-277ENST00000635990 AEBP2Q6ZN18 517 aaPredicted RBP8.94□□□□□ -0.98
TCF4-277ENST00000635990 CDK11AQ9UQ88 783 aaPredicted RBP8.93□□□□□ -0.98
TCF4-277ENST00000635990 CANXP27824 592 aaKnown RBP8.92□□□□□ -0.98
TCF4-277ENST00000635990 PPP1R15AO75807 674 aaPredicted RBP8.89□□□□□ -0.99
TCF4-277ENST00000635990 ARXQ96QS3 562 aa8.89□□□□□ -0.99
TCF4-277ENST00000635990 CHIC2Q9UKJ5 165 aa8.89□□□□□ -0.99
TCF4-277ENST00000635990 MLECQ14165 292 aa8.89□□□□□ -0.99
TCF4-277ENST00000635990 LMOD2Q6P5Q4 547 aa8.88□□□□□ -0.99
TCF4-277ENST00000635990 ZNF316A6NFI3 1004 aaPredicted RBP8.85□□□□□ -0.99
TCF4-277ENST00000635990 KDM2AQ9Y2K7 1162 aa8.85□□□□□ -0.99
TCF4-277ENST00000635990 RB1CC1Q8TDY2 1594 aa8.83□□□□□ -1
TCF4-277ENST00000635990 NPM2Q86SE8 214 aaKnown RBP8.81□□□□□ -1
TCF4-277ENST00000635990 SALL2Q9Y467 1007 aaPredicted RBP8.8□□□□□ -1
TCF4-277ENST00000635990 NPHP1O15259 732 aa8.79□□□□□ -1
TCF4-277ENST00000635990 TSPY4P0CV99 314 aa8.76□□□□□ -1.01
TCF4-277ENST00000635990 TSPY10P0CW01 314 aa8.76□□□□□ -1.01
TCF4-277ENST00000635990 ANP32CO43423 234 aa8.74□□□□□ -1.01
TCF4-277ENST00000635990 CSRNP3Q8WYN3 585 aa8.73□□□□□ -1.01
TCF4-277ENST00000635990 TULP1O00294 542 aaPredicted RBP8.73□□□□□ -1.01
TCF4-277ENST00000635990 PPM1GO15355 546 aaPredicted RBP8.73□□□□□ -1.01
TCF4-277ENST00000635990 HRCP23327 699 aa8.72□□□□□ -1.01
TCF4-277ENST00000635990 TMC1Q8TDI8 760 aa8.72□□□□□ -1.01
TCF4-277ENST00000635990 RGL3Q3MIN7 710 aa8.71□□□□□ -1.01
TCF4-277ENST00000635990 PLEKHD1A6NEE1 506 aa8.69□□□□□ -1.02
TCF4-277ENST00000635990 SOX12O15370 315 aa8.69□□□□□ -1.02
TCF4-277ENST00000635990 CCDC9Q9Y3X0 531 aaKnown RBP8.68□□□□□ -1.02
TCF4-277ENST00000635990 EIF4G1Q04637 1599 aaKnown RBP8.68□□□□□ -1.02
TCF4-277ENST00000635990 RRP7BPQ9NSQ0 103 aa8.68□□□□□ -1.02
TCF4-277ENST00000635990 CCDC180Q9P1Z9 1646 aa8.68□□□□□ -1.02
TCF4-277ENST00000635990 PHF23Q9BUL5 403 aaPredicted RBP8.67□□□□□ -1.02
TCF4-277ENST00000635990 DIEXFQ68CQ4 756 aaKnown RBP8.66□□□□□ -1.02
TCF4-277ENST00000635990 MTUS2Q5JR59 1369 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms