RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 DNAH1Q9P2D7 4330 aa8.59□□□□□ -1.03
SMARCA2-227ENST00000634760 KRTAP8-1Q8IUC2 63 aa8.58□□□□□ -1.04
SMARCA2-227ENST00000634760 DNAH10Q8IVF4 4471 aa8.57□□□□□ -1.04
SMARCA2-227ENST00000634760 TRRAPQ9Y4A5 3859 aa8.55□□□□□ -1.04
SMARCA2-227ENST00000634760 CUBNO60494 3623 aa8.5□□□□□ -1.05
SMARCA2-227ENST00000634760 MT1HP80294 61 aa8.46□□□□□ -1.05
SMARCA2-227ENST00000634760 SPRR2GQ9BYE4 73 aa8.44□□□□□ -1.06
SMARCA2-227ENST00000634760 KRTAP4-1Q9BYQ7 146 aa8.42□□□□□ -1.06
SMARCA2-227ENST00000634760 DNAH17Q9UFH2 4485 aa8.41□□□□□ -1.06
SMARCA2-227ENST00000634760 DNAH11Q96DT5 4516 aa8.4□□□□□ -1.06
SMARCA2-227ENST00000634760 DNAH5Q8TE73 4624 aa8.4□□□□□ -1.07
SMARCA2-227ENST00000634760 AKAP9Q99996 3911 aa8.39□□□□□ -1.07
SMARCA2-227ENST00000634760 ZNF469Q96JG9 3925 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-227ENST00000634760 KRTAP10-5P60370 271 aa8.33□□□□□ -1.08
SMARCA2-227ENST00000634760 MT2AP02795 61 aa8.33□□□□□ -1.08
SMARCA2-227ENST00000634760 VPS13DQ5THJ4 4388 aa8.32□□□□□ -1.08
SMARCA2-227ENST00000634760 SRRM2Q9UQ35 2752 aaKnown RBP8.3□□□□□ -1.08
SMARCA2-227ENST00000634760 DNAH3Q8TD57 4116 aa8.29□□□□□ -1.08
SMARCA2-227ENST00000634760 KRTAP19-4Q3LI73 84 aa8.25□□□□□ -1.09
SMARCA2-227ENST00000634760 COL7A1Q02388 2944 aa8.24□□□□□ -1.09
SMARCA2-227ENST00000634760 PLECQ15149 4684 aaKnown RBP8.17□□□□□ -1.1
SMARCA2-227ENST00000634760 DYNC2H1Q8NCM8 4307 aaKnown RBP8.13□□□□□ -1.11
SMARCA2-227ENST00000634760 DYNC1H1Q14204 4646 aaKnown RBP8.12□□□□□ -1.11
SMARCA2-227ENST00000634760 MT1FP04733 61 aa8.1□□□□□ -1.11
SMARCA2-227ENST00000634760 SACSQ9NZJ4 4579 aa8.1□□□□□ -1.11
SMARCA2-227ENST00000634760 FAT2Q9NYQ8 4349 aa8.06□□□□□ -1.12
SMARCA2-227ENST00000634760 DNAH6Q9C0G6 4158 aa8.05□□□□□ -1.12
SMARCA2-227ENST00000634760 KRTAP19-5Q3LI72 72 aa8.03□□□□□ -1.12
SMARCA2-227ENST00000634760 LCE3CQ5T5A8 94 aa8.02□□□□□ -1.13
SMARCA2-227ENST00000634760 DNAH8Q96JB1 4490 aa7.97□□□□□ -1.13
SMARCA2-227ENST00000634760 KRTAP10-7P60409 375 aaPredicted RBP7.95□□□□□ -1.14
SMARCA2-227ENST00000634760 LRP1BQ9NZR2 4599 aa7.92□□□□□ -1.14
SMARCA2-227ENST00000634760 CMYA5Q8N3K9 4069 aa7.87□□□□□ -1.15
SMARCA2-227ENST00000634760 SPRR2FQ96RM1 72 aa7.85□□□□□ -1.15
SMARCA2-227ENST00000634760 KRTAP19-8Q3LI54 63 aa7.84□□□□□ -1.15
SMARCA2-227ENST00000634760 DNAH7Q8WXX0 4024 aa7.76□□□□□ -1.17
SMARCA2-227ENST00000634760 STARD9Q9P2P6 4700 aa7.75□□□□□ -1.17
SMARCA2-227ENST00000634760 PRKDCP78527 4128 aaKnown RBP7.71□□□□□ -1.18
SMARCA2-227ENST00000634760 HERC1Q15751 4861 aa7.69□□□□□ -1.18
SMARCA2-227ENST00000634760 HSPG2P98160 4391 aa7.63□□□□□ -1.19
SMARCA2-227ENST00000634760 KRTAP19-1Q8IUB9 90 aa7.63□□□□□ -1.19
SMARCA2-227ENST00000634760 FAT1Q14517 4588 aa7.62□□□□□ -1.19
SMARCA2-227ENST00000634760 ANK2Q01484 3957 aa7.61□□□□□ -1.19
SMARCA2-227ENST00000634760 CSMD3Q7Z407 3707 aa7.58□□□□□ -1.2
SMARCA2-227ENST00000634760 APOBP04114 4563 aaKnown RBP7.58□□□□□ -1.2
SMARCA2-227ENST00000634760 MT1XP80297 61 aa7.53□□□□□ -1.2
SMARCA2-227ENST00000634760 FAT3Q8TDW7 4589 aa7.52□□□□□ -1.21
SMARCA2-227ENST00000634760 LRP1Q07954 4544 aaKnown RBP7.47□□□□□ -1.21
SMARCA2-227ENST00000634760 VPS13BQ7Z7G8 4022 aa7.46□□□□□ -1.21
SMARCA2-227ENST00000634760 SPRR2EP22531 72 aa7.45□□□□□ -1.22
SMARCA2-227ENST00000634760 SPRR2BP35325 72 aa7.45□□□□□ -1.22
SMARCA2-227ENST00000634760 SPRR2AP35326 72 aa7.45□□□□□ -1.22
SMARCA2-227ENST00000634760 RYR1P21817 5038 aa7.43□□□□□ -1.22
SMARCA2-227ENST00000634760 MT1BP07438 61 aa7.42□□□□□ -1.22
SMARCA2-227ENST00000634760 DNHD1Q96M86 4753 aa7.4□□□□□ -1.22
SMARCA2-227ENST00000634760 RYR3Q15413 4870 aa7.36□□□□□ -1.23
SMARCA2-227ENST00000634760 KRTAP9-8Q9BYQ0 159 aa7.36□□□□□ -1.23
SMARCA2-227ENST00000634760 KRTAP17-1Q9BYP8 105 aa7.34□□□□□ -1.23
SMARCA2-227ENST00000634760 SPRR5A0A1B0GTR4 108 aa7.34□□□□□ -1.23
SMARCA2-227ENST00000634760 RYR2Q92736 4967 aa7.32□□□□□ -1.24
SMARCA2-227ENST00000634760 LYSTQ99698 3801 aa7.32□□□□□ -1.24
SMARCA2-227ENST00000634760 KMT2AQ03164 3969 aa7.3□□□□□ -1.24
SMARCA2-227ENST00000634760 MT1GP13640 62 aa7.27□□□□□ -1.25
SMARCA2-227ENST00000634760 MYCBP2O75592 4640 aa7.24□□□□□ -1.25
SMARCA2-227ENST00000634760 KRTAP9-3Q9BYQ3 159 aa7.24□□□□□ -1.25
SMARCA2-227ENST00000634760 SPRR2DP22532 72 aa7.24□□□□□ -1.25
SMARCA2-227ENST00000634760 FRAS1Q86XX4 4008 aa7.23□□□□□ -1.25
SMARCA2-227ENST00000634760 LCE2BO14633 110 aa7.23□□□□□ -1.25
SMARCA2-227ENST00000634760 LCE3BQ5TA77 95 aa7.23□□□□□ -1.25
SMARCA2-227ENST00000634760 LCE2CQ5TA81 110 aa7.19□□□□□ -1.26
SMARCA2-227ENST00000634760 HECTD4Q9Y4D8 3996 aa7.18□□□□□ -1.26
SMARCA2-227ENST00000634760 KRTAP12-4P60329 112 aa7.14□□□□□ -1.27
SMARCA2-227ENST00000634760 PKHD1L1Q86WI1 4243 aa7.13□□□□□ -1.27
SMARCA2-227ENST00000634760 KRTAP4-8A0A0G2JLE6 195 aa7.01□□□□□ -1.29
SMARCA2-227ENST00000634760 KRTAP4-8Q9BYQ9 185 aa7.01□□□□□ -1.29
SMARCA2-227ENST00000634760 PKD1P98161 4303 aa6.98□□□□□ -1.29
SMARCA2-227ENST00000634760 LCE3DQ9BYE3 92 aa6.97□□□□□ -1.29
SMARCA2-227ENST00000634760 KRTAP19-3Q7Z4W3 81 aa6.95□□□□□ -1.3
SMARCA2-227ENST00000634760 MT1LQ93083 61 aa6.91□□□□□ -1.3
SMARCA2-227ENST00000634760 LCE3EQ5T5B0 92 aa6.89□□□□□ -1.31
SMARCA2-227ENST00000634760 MUC17Q685J3 4493 aa6.89□□□□□ -1.31
SMARCA2-227ENST00000634760 KRTAP19-2Q3LHN2 52 aa6.82□□□□□ -1.32
SMARCA2-227ENST00000634760 MT1EP04732 61 aa6.82□□□□□ -1.32
SMARCA2-227ENST00000634760 BIRC6Q9NR09 4857 aa6.77□□□□□ -1.33
SMARCA2-227ENST00000634760 HYDINQ4G0P3 5121 aa6.7□□□□□ -1.34
SMARCA2-227ENST00000634760 KIAA1109Q2LD37 5005 aa6.69□□□□□ -1.34
SMARCA2-227ENST00000634760 TNXBP22105 4242 aa6.68□□□□□ -1.34
SMARCA2-227ENST00000634760 PKHD1P08F94 4074 aa6.67□□□□□ -1.34
SMARCA2-227ENST00000634760 KRTAP19-6Q3LI70 58 aa6.65□□□□□ -1.35
SMARCA2-227ENST00000634760 MT1MQ8N339 61 aa6.61□□□□□ -1.35
SMARCA2-227ENST00000634760 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
SMARCA2-227ENST00000634760 HERC2O95714 4834 aa6.56□□□□□ -1.36
SMARCA2-227ENST00000634760 LCE2DQ5TA82 110 aaPredicted RBP6.56□□□□□ -1.36
SMARCA2-227ENST00000634760 MT3P25713 68 aa6.55□□□□□ -1.36
SMARCA2-227ENST00000634760 FLGP20930 4061 aaPredicted RBP6.52□□□□□ -1.37
SMARCA2-227ENST00000634760 LPAP08519 4548 aa6.42□□□□□ -1.38
SMARCA2-227ENST00000634760 LRP2P98164 4655 aa6.39□□□□□ -1.39
SMARCA2-227ENST00000634760 PCLOQ9Y6V0 5065 aa6.35□□□□□ -1.39
SMARCA2-227ENST00000634760 PRM1P04553 51 aa6.26□□□□□ -1.41
SMARCA2-227ENST00000634760 KMT2CQ8NEZ4 4911 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms