RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 DCAF8L2P0C7V8 631 aa35.9■■■■□ 3.34
SMARCA2-227ENST00000634760 NISCHQ9Y2I1 1504 aa35.22■■■■□ 3.23
SMARCA2-227ENST00000634760 SUPT5HO00267 1087 aaKnown RBP34.26■■■■□ 3.07
SMARCA2-227ENST00000634760 SHROOM4Q9ULL8 1493 aa33.64■■■□□ 2.98
SMARCA2-227ENST00000634760 PELP1Q8IZL8 1130 aaKnown RBP33.21■■■□□ 2.91
SMARCA2-227ENST00000634760 APLP2Q06481 763 aa33.01■■■□□ 2.88
SMARCA2-227ENST00000634760 EHMT2Q96KQ7 1210 aa32.76■■■□□ 2.84
SMARCA2-227ENST00000634760 FAM9AQ8IZU1 332 aaPredicted RBP32.68■■■□□ 2.82
SMARCA2-227ENST00000634760 ZEB1P37275 1124 aaPredicted RBP32.26■■■□□ 2.76
SMARCA2-227ENST00000634760 PCGF6Q9BYE7 350 aa32.04■■■□□ 2.72
SMARCA2-227ENST00000634760 TRIM41Q8WV44 630 aa32.03■■■□□ 2.72
SMARCA2-227ENST00000634760 CENPBP07199 599 aaPredicted RBP31.93■■■□□ 2.7
SMARCA2-227ENST00000634760 TTBK1Q5TCY1 1321 aaPredicted RBP31.77■■■□□ 2.68
SMARCA2-227ENST00000634760 CCER1Q8TC90 406 aaPredicted RBP31.72■■■□□ 2.67
SMARCA2-227ENST00000634760 UBTFP17480 764 aaKnown RBP31.57■■■□□ 2.64
SMARCA2-227ENST00000634760 ERICH6Q7L0X2 663 aa31.53■■■□□ 2.64
SMARCA2-227ENST00000634760 RANGAP1P46060 587 aaPredicted RBP31.51■■■□□ 2.63
SMARCA2-227ENST00000634760 ATP1B4Q9UN42 357 aaPredicted RBP31.46■■■□□ 2.63
SMARCA2-227ENST00000634760 NEFLP07196 543 aa31.23■■■□□ 2.59
SMARCA2-227ENST00000634760 TRIM26Q12899 539 aaPredicted RBP31.12■■■□□ 2.57
SMARCA2-227ENST00000634760 MYT1Q01538 1121 aa31.01■■■□□ 2.55
SMARCA2-227ENST00000634760 YTHDC1Q96MU7 727 aaKnown RBP30.74■■■□□ 2.51
SMARCA2-227ENST00000634760 HRCP23327 699 aa30.63■■■□□ 2.49
SMARCA2-227ENST00000634760 CHIC1Q5VXU3 224 aa30.57■■■□□ 2.48
SMARCA2-227ENST00000634760 PPARGC1BQ86YN6 1023 aaKnown RBP30.57■■■□□ 2.48
SMARCA2-227ENST00000634760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.42■■■□□ 2.46
SMARCA2-227ENST00000634760 HNRNPUL2Q1KMD3 747 aaKnown RBP30.42■■■□□ 2.46
SMARCA2-227ENST00000634760 ITGAEP38570 1179 aa30.34■■■□□ 2.45
SMARCA2-227ENST00000634760 MYT1LQ9UL68 1186 aa30.32■■■□□ 2.44
SMARCA2-227ENST00000634760 DAXXQ9UER7 740 aaPredicted RBP30.29■■■□□ 2.44
SMARCA2-227ENST00000634760 LOC105371045A0A1W2PR82 267 aa30.28■■■□□ 2.44
SMARCA2-227ENST00000634760 POLR3GLQ9BT43 218 aa30.13■■■□□ 2.41
SMARCA2-227ENST00000634760 ABCC9O60706 1549 aa29.92■■■□□ 2.38
SMARCA2-227ENST00000634760 DIEXFQ68CQ4 756 aaKnown RBP29.87■■■□□ 2.37
SMARCA2-227ENST00000634760 FAM50AQ14320 339 aaKnown RBP29.83■■■□□ 2.37
SMARCA2-227ENST00000634760 TRIM52Q96A61 297 aa29.69■■■□□ 2.34
SMARCA2-227ENST00000634760 PABPN1Q86U42 306 aaKnown RBP eCLIP29.65■■■□□ 2.34
SMARCA2-227ENST00000634760 SLC4A1APQ9BWU0 796 aaKnown RBP29.64■■■□□ 2.34
SMARCA2-227ENST00000634760 ZNF316A6NFI3 1004 aaPredicted RBP29.59■■■□□ 2.33
SMARCA2-227ENST00000634760 RTL5Q5HYW3 569 aaPredicted RBP29.56■■■□□ 2.32
SMARCA2-227ENST00000634760 CNGB1Q14028 1251 aaPredicted RBP29.53■■■□□ 2.32
SMARCA2-227ENST00000634760 CLSPNQ9HAW4 1339 aa29.49■■■□□ 2.31
SMARCA2-227ENST00000634760 ANP32CO43423 234 aa29.49■■■□□ 2.31
SMARCA2-227ENST00000634760 NEUROD1Q13562 356 aa29.46■■■□□ 2.31
SMARCA2-227ENST00000634760 CSRNP3Q8WYN3 585 aa29.29■■■□□ 2.28
SMARCA2-227ENST00000634760 ZCCHC6Q5VYS8 1495 aaKnown RBP29.22■■■□□ 2.27
SMARCA2-227ENST00000634760 CDK11AQ9UQ88 783 aaPredicted RBP29.21■■■□□ 2.27
SMARCA2-227ENST00000634760 ZBTB47Q9UFB7 747 aaPredicted RBP29.16■■■□□ 2.26
SMARCA2-227ENST00000634760 CCDC180Q9P1Z9 1646 aa29.15■■■□□ 2.26
SMARCA2-227ENST00000634760 ZNF326Q5BKZ1 582 aaKnown RBP29.14■■■□□ 2.26
SMARCA2-227ENST00000634760 SCRIBQ14160 1630 aa29.1■■■□□ 2.25
SMARCA2-227ENST00000634760 FBLN2P98095 1184 aa29.09■■■□□ 2.25
SMARCA2-227ENST00000634760 GTF3C3Q9Y5Q9 886 aa29.07■■■□□ 2.24
SMARCA2-227ENST00000634760 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
SMARCA2-227ENST00000634760 NEFMP07197 916 aa29.02■■■□□ 2.24
SMARCA2-227ENST00000634760 CANXP27824 592 aaKnown RBP28.96■■■□□ 2.23
SMARCA2-227ENST00000634760 BCANQ96GW7 911 aa28.93■■■□□ 2.22
SMARCA2-227ENST00000634760 P3H3Q8IVL6 736 aa28.89■■■□□ 2.21
SMARCA2-227ENST00000634760 ACIN1Q9UKV3 1341 aaKnown RBP28.84■■■□□ 2.21
SMARCA2-227ENST00000634760 TONSLQ96HA7 1378 aa28.8■■■□□ 2.2
SMARCA2-227ENST00000634760 ZNF777Q9ULD5 760 aaPredicted RBP28.76■■■□□ 2.19
SMARCA2-227ENST00000634760 ANP32AP39687 249 aaKnown RBP28.74■■■□□ 2.19
SMARCA2-227ENST00000634760 ARID3CA6NKF2 412 aa28.63■■■□□ 2.17
SMARCA2-227ENST00000634760 RB1CC1Q8TDY2 1594 aa28.57■■■□□ 2.16
SMARCA2-227ENST00000634760 ESF1Q9H501 851 aaKnown RBP28.54■■■□□ 2.16
SMARCA2-227ENST00000634760 EEA1Q15075 1411 aa28.54■■■□□ 2.16
SMARCA2-227ENST00000634760 SLC24A1O60721 1099 aa28.54■■■□□ 2.16
SMARCA2-227ENST00000634760 NPM1P06748 294 aaKnown RBP eCLIP28.45■■■□□ 2.15
SMARCA2-227ENST00000634760 STAG3Q9UJ98 1225 aa28.39■■■□□ 2.13
SMARCA2-227ENST00000634760 UPF2Q9HAU5 1272 aaKnown RBP28.38■■■□□ 2.13
SMARCA2-227ENST00000634760 CLIP1P30622 1438 aa28.38■■■□□ 2.13
SMARCA2-227ENST00000634760 MTUS2Q5JR59 1369 aa28.37■■■□□ 2.13
SMARCA2-227ENST00000634760 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.37■■■□□ 2.13
SMARCA2-227ENST00000634760 GOLGA3Q08378 1498 aa28.36■■■□□ 2.13
SMARCA2-227ENST00000634760 FKBP8Q14318 412 aa28.36■■■□□ 2.13
SMARCA2-227ENST00000634760 HNRNPUQ00839 825 aaKnown RBP eCLIP28.35■■■□□ 2.13
SMARCA2-227ENST00000634760 RSF1Q96T23 1441 aaPredicted RBP28.33■■■□□ 2.13
SMARCA2-227ENST00000634760 NACADO15069 1562 aa28.32■■■□□ 2.12
SMARCA2-227ENST00000634760 CHGAP10645 457 aaKnown RBP28.3■■■□□ 2.12
SMARCA2-227ENST00000634760 ANP32BQ92688 251 aaKnown RBP28.3■■■□□ 2.12
SMARCA2-227ENST00000634760 TSPY4P0CV99 314 aa28.3■■■□□ 2.12
SMARCA2-227ENST00000634760 TSPY10P0CW01 314 aa28.3■■■□□ 2.12
SMARCA2-227ENST00000634760 DDX10Q13206 875 aaKnown RBP28.28■■■□□ 2.12
SMARCA2-227ENST00000634760 NPM2Q86SE8 214 aaKnown RBP28.25■■■□□ 2.11
SMARCA2-227ENST00000634760 TMC1Q8TDI8 760 aa28.24■■■□□ 2.11
SMARCA2-227ENST00000634760 FAM9BQ8IZU0 186 aa28.23■■■□□ 2.11
SMARCA2-227ENST00000634760 WDR43Q15061 677 aaKnown RBP eCLIP28.21■■■□□ 2.11
SMARCA2-227ENST00000634760 BCL11AQ9H165 835 aa28.2■■■□□ 2.11
SMARCA2-227ENST00000634760 CHIC2Q9UKJ5 165 aa28.19■■■□□ 2.1
SMARCA2-227ENST00000634760 HSP90AA1P07900 732 aaKnown RBP28.18■■■□□ 2.1
SMARCA2-227ENST00000634760 CHMP7Q8WUX9 453 aaPredicted RBP28.13■■■□□ 2.09
SMARCA2-227ENST00000634760 CEP162Q5TB80 1403 aa28.11■■■□□ 2.09
SMARCA2-227ENST00000634760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.11■■■□□ 2.094e-7■■■■□ 23.1
SMARCA2-227ENST00000634760 CCDC136Q96JN2 1154 aa28.1■■■□□ 2.09
SMARCA2-227ENST00000634760 EIF4G2P78344 907 aaKnown RBP eCLIP28.08■■■□□ 2.093e-6■■■■□ 24.5
SMARCA2-227ENST00000634760 MRS2Q9HD23 443 aa28.07■■■□□ 2.08
SMARCA2-227ENST00000634760 BAZ1BQ9UIG0 1483 aaKnown RBP28.07■■■□□ 2.08
SMARCA2-227ENST00000634760 WRNQ14191 1432 aaPredicted RBP eCLIP28.07■■■□□ 2.08
SMARCA2-227ENST00000634760 CEP164Q9UPV0 1460 aa28.07■■■□□ 2.08
SMARCA2-227ENST00000634760 KIF27Q86VH2 1401 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms