RNA–Protein interactions for RNA: ENST00000627212.2

RAPGEF6-215, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-215ENST00000627212 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
RAPGEF6-215ENST00000627212 FRAS1Q86XX4 4008 aa4.52□□□□□ -1.69
RAPGEF6-215ENST00000627212 HUWE1Q7Z6Z7 4374 aaKnown RBP4.5□□□□□ -1.69
RAPGEF6-215ENST00000627212 DNAH6Q9C0G6 4158 aa4.49□□□□□ -1.69
RAPGEF6-215ENST00000627212 KRTAP4-5Q9BYR2 181 aa4.49□□□□□ -1.69
RAPGEF6-215ENST00000627212 HECTD4Q9Y4D8 3996 aa4.48□□□□□ -1.69
RAPGEF6-215ENST00000627212 KRTAP10-4P60372 401 aaPredicted RBP4.46□□□□□ -1.69
RAPGEF6-215ENST00000627212 LORP23490 312 aaPredicted RBP4.43□□□□□ -1.7
RAPGEF6-215ENST00000627212 DNAH5Q8TE73 4624 aa4.41□□□□□ -1.7
RAPGEF6-215ENST00000627212 DNHD1Q96M86 4753 aa4.4□□□□□ -1.71
RAPGEF6-215ENST00000627212 DNAH11Q96DT5 4516 aa4.4□□□□□ -1.71
RAPGEF6-215ENST00000627212 FAT1Q14517 4588 aa4.38□□□□□ -1.71
RAPGEF6-215ENST00000627212 PKHD1P08F94 4074 aa4.38□□□□□ -1.71
RAPGEF6-215ENST00000627212 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
RAPGEF6-215ENST00000627212 PLECQ15149 4684 aaKnown RBP4.36□□□□□ -1.71
RAPGEF6-215ENST00000627212 DNAH8Q96JB1 4490 aa4.34□□□□□ -1.71
RAPGEF6-215ENST00000627212 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
RAPGEF6-215ENST00000627212 VPS13DQ5THJ4 4388 aa4.31□□□□□ -1.72
RAPGEF6-215ENST00000627212 DNAH10Q8IVF4 4471 aa4.3□□□□□ -1.72
RAPGEF6-215ENST00000627212 DNAH9Q9NYC9 4486 aa4.29□□□□□ -1.72
RAPGEF6-215ENST00000627212 DNAH17Q9UFH2 4485 aa4.28□□□□□ -1.72
RAPGEF6-215ENST00000627212 PKHD1L1Q86WI1 4243 aa4.28□□□□□ -1.72
RAPGEF6-215ENST00000627212 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
RAPGEF6-215ENST00000627212 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
RAPGEF6-215ENST00000627212 PKD1P98161 4303 aa4.26□□□□□ -1.73
RAPGEF6-215ENST00000627212 MYCBP2O75592 4640 aa4.24□□□□□ -1.73
RAPGEF6-215ENST00000627212 RYR1P21817 5038 aa4.22□□□□□ -1.73
RAPGEF6-215ENST00000627212 INE1O15225 51 aa4.2□□□□□ -1.74
RAPGEF6-215ENST00000627212 FAT3Q8TDW7 4589 aa4.18□□□□□ -1.74
RAPGEF6-215ENST00000627212 DNAH2Q9P225 4427 aa4.18□□□□□ -1.74
RAPGEF6-215ENST00000627212 ALMS1Q8TCU4 4167 aa4.16□□□□□ -1.74
RAPGEF6-215ENST00000627212 FAT2Q9NYQ8 4349 aa4.16□□□□□ -1.74
RAPGEF6-215ENST00000627212 KRTAP4-1Q9BYQ7 146 aa4.16□□□□□ -1.74
RAPGEF6-215ENST00000627212 KMT2AQ03164 3969 aa4.16□□□□□ -1.74
RAPGEF6-215ENST00000627212 LRP1BQ9NZR2 4599 aa4.16□□□□□ -1.74
RAPGEF6-215ENST00000627212 DYNC1H1Q14204 4646 aaKnown RBP4.15□□□□□ -1.74
RAPGEF6-215ENST00000627212 VPS13BQ7Z7G8 4022 aa4.13□□□□□ -1.75
RAPGEF6-215ENST00000627212 STARD9Q9P2P6 4700 aa4.1□□□□□ -1.75
RAPGEF6-215ENST00000627212 SACSQ9NZJ4 4579 aa4.1□□□□□ -1.75
RAPGEF6-215ENST00000627212 KIAA1109Q2LD37 5005 aa4.08□□□□□ -1.76
RAPGEF6-215ENST00000627212 APOBP04114 4563 aaKnown RBP4.06□□□□□ -1.76
RAPGEF6-215ENST00000627212 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
RAPGEF6-215ENST00000627212 KRTAP10-5P60370 271 aa4.03□□□□□ -1.77
RAPGEF6-215ENST00000627212 HSPG2P98160 4391 aa3.98□□□□□ -1.77
RAPGEF6-215ENST00000627212 LRP1Q07954 4544 aaKnown RBP3.96□□□□□ -1.78
RAPGEF6-215ENST00000627212 HYDINQ4G0P3 5121 aa3.96□□□□□ -1.78
RAPGEF6-215ENST00000627212 MT2AP02795 61 aa3.94□□□□□ -1.78
RAPGEF6-215ENST00000627212 TNXBP22105 4242 aa3.93□□□□□ -1.78
RAPGEF6-215ENST00000627212 MT1HP80294 61 aa3.93□□□□□ -1.78
RAPGEF6-215ENST00000627212 KRTAP8-1Q8IUC2 63 aa3.92□□□□□ -1.78
RAPGEF6-215ENST00000627212 RYR3Q15413 4870 aa3.91□□□□□ -1.78
RAPGEF6-215ENST00000627212 MT1FP04733 61 aa3.89□□□□□ -1.79
RAPGEF6-215ENST00000627212 SPRR2GQ9BYE4 73 aa3.87□□□□□ -1.79
RAPGEF6-215ENST00000627212 LRP2P98164 4655 aa3.87□□□□□ -1.79
RAPGEF6-215ENST00000627212 KRTAP17-1Q9BYP8 105 aa3.83□□□□□ -1.8
RAPGEF6-215ENST00000627212 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
RAPGEF6-215ENST00000627212 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
RAPGEF6-215ENST00000627212 KRTAP19-1Q8IUB9 90 aa3.74□□□□□ -1.81
RAPGEF6-215ENST00000627212 RYR2Q92736 4967 aa3.72□□□□□ -1.81
RAPGEF6-215ENST00000627212 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
RAPGEF6-215ENST00000627212 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
RAPGEF6-215ENST00000627212 HERC2O95714 4834 aa3.72□□□□□ -1.81
RAPGEF6-215ENST00000627212 PCLOQ9Y6V0 5065 aa3.7□□□□□ -1.82
RAPGEF6-215ENST00000627212 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
RAPGEF6-215ENST00000627212 KMT2CQ8NEZ4 4911 aaKnown RBP3.63□□□□□ -1.83
RAPGEF6-215ENST00000627212 FSIP2Q5CZC0 6907 aa3.6□□□□□ -1.83
RAPGEF6-215ENST00000627212 MT1XP80297 61 aa3.6□□□□□ -1.83
RAPGEF6-215ENST00000627212 KRTAP4-8A0A0G2JLE6 195 aa3.59□□□□□ -1.83
RAPGEF6-215ENST00000627212 KRTAP4-8Q9BYQ9 185 aa3.59□□□□□ -1.83
RAPGEF6-215ENST00000627212 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.84
RAPGEF6-215ENST00000627212 LPAP08519 4548 aa3.58□□□□□ -1.84
RAPGEF6-215ENST00000627212 KRTAP19-8Q3LI54 63 aa3.57□□□□□ -1.84
RAPGEF6-215ENST00000627212 MT1BP07438 61 aa3.56□□□□□ -1.84
RAPGEF6-215ENST00000627212 EPPK1P58107 5090 aaKnown RBP3.55□□□□□ -1.84
RAPGEF6-215ENST00000627212 LCE3BQ5TA77 95 aa3.53□□□□□ -1.84
RAPGEF6-215ENST00000627212 KRTAP9-8Q9BYQ0 159 aa3.52□□□□□ -1.85
RAPGEF6-215ENST00000627212 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
RAPGEF6-215ENST00000627212 MT1GP13640 62 aa3.51□□□□□ -1.85
RAPGEF6-215ENST00000627212 UBR4Q5T4S7 5183 aa3.5□□□□□ -1.85
RAPGEF6-215ENST00000627212 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
RAPGEF6-215ENST00000627212 LCE2CQ5TA81 110 aa3.47□□□□□ -1.85
RAPGEF6-215ENST00000627212 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
RAPGEF6-215ENST00000627212 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.86
RAPGEF6-215ENST00000627212 HERC1Q15751 4861 aa3.44□□□□□ -1.86
RAPGEF6-215ENST00000627212 ABCA13Q86UQ4 5058 aa3.44□□□□□ -1.86
RAPGEF6-215ENST00000627212 MUC17Q685J3 4493 aa3.44□□□□□ -1.86
RAPGEF6-215ENST00000627212 LCE2DQ5TA82 110 aaPredicted RBP3.42□□□□□ -1.86
RAPGEF6-215ENST00000627212 BIRC6Q9NR09 4857 aa3.42□□□□□ -1.86
RAPGEF6-215ENST00000627212 KRTAP9-3Q9BYQ3 159 aa3.4□□□□□ -1.87
RAPGEF6-215ENST00000627212 SPRR2EP22531 72 aa3.34□□□□□ -1.87
RAPGEF6-215ENST00000627212 SPRR2BP35325 72 aa3.34□□□□□ -1.87
RAPGEF6-215ENST00000627212 SPRR2AP35326 72 aa3.34□□□□□ -1.87
RAPGEF6-215ENST00000627212 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
RAPGEF6-215ENST00000627212 KRTAP19-4Q3LI73 84 aa3.33□□□□□ -1.88
RAPGEF6-215ENST00000627212 MUC2Q02817 5179 aa3.32□□□□□ -1.88
RAPGEF6-215ENST00000627212 LCE2BO14633 110 aa3.31□□□□□ -1.88
RAPGEF6-215ENST00000627212 RNF213Q63HN8 5207 aa3.3□□□□□ -1.88
RAPGEF6-215ENST00000627212 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
RAPGEF6-215ENST00000627212 FAT4Q6V0I7 4981 aa3.25□□□□□ -1.89
RAPGEF6-215ENST00000627212 MT1LQ93083 61 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms