RNA–Protein interactions for RNA: ENST00000621518.4

NCAM1-229, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 4,922 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-229ENST00000621518 SVEP1Q4LDE5 3571 aa4.78□□□□□ -1.64
NCAM1-229ENST00000621518 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
NCAM1-229ENST00000621518 DNAH2Q9P225 4427 aa4.77□□□□□ -1.65
NCAM1-229ENST00000621518 AKAP9Q99996 3911 aa4.74□□□□□ -1.65
NCAM1-229ENST00000621518 VPS13DQ5THJ4 4388 aa4.74□□□□□ -1.65
NCAM1-229ENST00000621518 MT1HP80294 61 aa4.74□□□□□ -1.65
NCAM1-229ENST00000621518 DNHD1Q96M86 4753 aa4.74□□□□□ -1.65
NCAM1-229ENST00000621518 DYNC1H1Q14204 4646 aaKnown RBP4.7□□□□□ -1.66
NCAM1-229ENST00000621518 KRTAP4-1Q9BYQ7 146 aa4.7□□□□□ -1.66
NCAM1-229ENST00000621518 DNAH17Q9UFH2 4485 aa4.7□□□□□ -1.66
NCAM1-229ENST00000621518 KRTAP8-1Q8IUC2 63 aa4.68□□□□□ -1.66
NCAM1-229ENST00000621518 LORP23490 312 aaPredicted RBP4.67□□□□□ -1.66
NCAM1-229ENST00000621518 LCE3AQ5TA76 89 aa4.65□□□□□ -1.66
NCAM1-229ENST00000621518 MT2AP02795 61 aa4.65□□□□□ -1.67
NCAM1-229ENST00000621518 SPRR2GQ9BYE4 73 aa4.64□□□□□ -1.67
NCAM1-229ENST00000621518 VPS13CQ709C8 3753 aa4.59□□□□□ -1.68
NCAM1-229ENST00000621518 INE1O15225 51 aa4.58□□□□□ -1.68
NCAM1-229ENST00000621518 LRP1BQ9NZR2 4599 aa4.58□□□□□ -1.68
NCAM1-229ENST00000621518 DYNC2H1Q8NCM8 4307 aaKnown RBP4.58□□□□□ -1.68
NCAM1-229ENST00000621518 FAT2Q9NYQ8 4349 aa4.57□□□□□ -1.68
NCAM1-229ENST00000621518 CRCT1Q9UGL9 99 aa4.56□□□□□ -1.68
NCAM1-229ENST00000621518 ZNF469Q96JG9 3925 aaPredicted RBP4.55□□□□□ -1.68
NCAM1-229ENST00000621518 SACSQ9NZJ4 4579 aa4.53□□□□□ -1.68
NCAM1-229ENST00000621518 RYR1P21817 5038 aa4.52□□□□□ -1.69
NCAM1-229ENST00000621518 MT1FP04733 61 aa4.51□□□□□ -1.69
NCAM1-229ENST00000621518 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
NCAM1-229ENST00000621518 ANK2Q01484 3957 aa4.5□□□□□ -1.69
NCAM1-229ENST00000621518 STARD9Q9P2P6 4700 aa4.49□□□□□ -1.69
NCAM1-229ENST00000621518 DNAH3Q8TD57 4116 aa4.49□□□□□ -1.69
NCAM1-229ENST00000621518 DNAH6Q9C0G6 4158 aa4.48□□□□□ -1.69
NCAM1-229ENST00000621518 DNAH8Q96JB1 4490 aa4.45□□□□□ -1.7
NCAM1-229ENST00000621518 FAT1Q14517 4588 aa4.43□□□□□ -1.7
NCAM1-229ENST00000621518 RYR3Q15413 4870 aa4.4□□□□□ -1.7
NCAM1-229ENST00000621518 PRKDCP78527 4128 aaKnown RBP4.4□□□□□ -1.71
NCAM1-229ENST00000621518 RYR2Q92736 4967 aa4.4□□□□□ -1.71
NCAM1-229ENST00000621518 KRTAP19-8Q3LI54 63 aa4.38□□□□□ -1.71
NCAM1-229ENST00000621518 HERC1Q15751 4861 aa4.36□□□□□ -1.71
NCAM1-229ENST00000621518 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
NCAM1-229ENST00000621518 KRTAP17-1Q9BYP8 105 aa4.33□□□□□ -1.72
NCAM1-229ENST00000621518 APOBP04114 4563 aaKnown RBP4.32□□□□□ -1.72
NCAM1-229ENST00000621518 BIRC6Q9NR09 4857 aa4.32□□□□□ -1.72
NCAM1-229ENST00000621518 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
NCAM1-229ENST00000621518 KIAA1109Q2LD37 5005 aa4.3□□□□□ -1.72
NCAM1-229ENST00000621518 FAT3Q8TDW7 4589 aa4.29□□□□□ -1.72
NCAM1-229ENST00000621518 CSMD3Q7Z407 3707 aa4.29□□□□□ -1.72
NCAM1-229ENST00000621518 HSPG2P98160 4391 aa4.27□□□□□ -1.73
NCAM1-229ENST00000621518 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
NCAM1-229ENST00000621518 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
NCAM1-229ENST00000621518 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
NCAM1-229ENST00000621518 DNAH7Q8WXX0 4024 aa4.24□□□□□ -1.73
NCAM1-229ENST00000621518 LRP1Q07954 4544 aaKnown RBP4.23□□□□□ -1.73
NCAM1-229ENST00000621518 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
NCAM1-229ENST00000621518 KRTAP9-8Q9BYQ0 159 aa4.19□□□□□ -1.74
NCAM1-229ENST00000621518 VPS13BQ7Z7G8 4022 aa4.18□□□□□ -1.74
NCAM1-229ENST00000621518 KMT2AQ03164 3969 aa4.18□□□□□ -1.74
NCAM1-229ENST00000621518 HERC2O95714 4834 aa4.16□□□□□ -1.74
NCAM1-229ENST00000621518 LCE2CQ5TA81 110 aa4.15□□□□□ -1.74
NCAM1-229ENST00000621518 MYCBP2O75592 4640 aa4.14□□□□□ -1.75
NCAM1-229ENST00000621518 MT1BP07438 61 aa4.13□□□□□ -1.75
NCAM1-229ENST00000621518 SPRR2EP22531 72 aa4.12□□□□□ -1.75
NCAM1-229ENST00000621518 SPRR2BP35325 72 aa4.12□□□□□ -1.75
NCAM1-229ENST00000621518 SPRR2AP35326 72 aa4.12□□□□□ -1.75
NCAM1-229ENST00000621518 KRTAP9-3Q9BYQ3 159 aa4.12□□□□□ -1.75
NCAM1-229ENST00000621518 MT1XP80297 61 aa4.11□□□□□ -1.75
NCAM1-229ENST00000621518 CMYA5Q8N3K9 4069 aa4.11□□□□□ -1.75
NCAM1-229ENST00000621518 PKHD1L1Q86WI1 4243 aa4.09□□□□□ -1.75
NCAM1-229ENST00000621518 PKD1P98161 4303 aa4.06□□□□□ -1.76
NCAM1-229ENST00000621518 FRAS1Q86XX4 4008 aa4.05□□□□□ -1.76
NCAM1-229ENST00000621518 PCLOQ9Y6V0 5065 aa4.05□□□□□ -1.76
NCAM1-229ENST00000621518 LYSTQ99698 3801 aa4.03□□□□□ -1.76
NCAM1-229ENST00000621518 MT1GP13640 62 aa4.01□□□□□ -1.77
NCAM1-229ENST00000621518 SPRR2DP22532 72 aa4.01□□□□□ -1.77
NCAM1-229ENST00000621518 LCE2BO14633 110 aa4□□□□□ -1.77
NCAM1-229ENST00000621518 HECTD4Q9Y4D8 3996 aa3.99□□□□□ -1.77
NCAM1-229ENST00000621518 KRTAP19-2Q3LHN2 52 aa3.97□□□□□ -1.77
NCAM1-229ENST00000621518 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
NCAM1-229ENST00000621518 LCE2DQ5TA82 110 aaPredicted RBP3.88□□□□□ -1.79
NCAM1-229ENST00000621518 HYDINQ4G0P3 5121 aa3.87□□□□□ -1.79
NCAM1-229ENST00000621518 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
NCAM1-229ENST00000621518 KRTAP19-3Q7Z4W3 81 aa3.84□□□□□ -1.8
NCAM1-229ENST00000621518 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
NCAM1-229ENST00000621518 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
NCAM1-229ENST00000621518 LRP2P98164 4655 aa3.82□□□□□ -1.8
NCAM1-229ENST00000621518 KRTAP9-2Q9BYQ4 174 aa3.81□□□□□ -1.8
NCAM1-229ENST00000621518 PKHD1P08F94 4074 aa3.81□□□□□ -1.8
NCAM1-229ENST00000621518 LCE2AQ5TA79 106 aaPredicted RBP3.79□□□□□ -1.8
NCAM1-229ENST00000621518 ABCA13Q86UQ4 5058 aa3.76□□□□□ -1.81
NCAM1-229ENST00000621518 MUC17Q685J3 4493 aa3.76□□□□□ -1.81
NCAM1-229ENST00000621518 MT1LQ93083 61 aa3.75□□□□□ -1.81
NCAM1-229ENST00000621518 EPPK1P58107 5090 aaKnown RBP3.75□□□□□ -1.81
NCAM1-229ENST00000621518 MT1EP04732 61 aa3.75□□□□□ -1.81
NCAM1-229ENST00000621518 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
NCAM1-229ENST00000621518 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
NCAM1-229ENST00000621518 FLGP20930 4061 aaPredicted RBP3.74□□□□□ -1.81
NCAM1-229ENST00000621518 KMT2CQ8NEZ4 4911 aaKnown RBP3.72□□□□□ -1.81
NCAM1-229ENST00000621518 TNXBP22105 4242 aa3.72□□□□□ -1.81
NCAM1-229ENST00000621518 KRTAP9-6A0A140TA67 174 aa3.67□□□□□ -1.82
NCAM1-229ENST00000621518 MT1MQ8N339 61 aa3.62□□□□□ -1.83
NCAM1-229ENST00000621518 LPAP08519 4548 aa3.62□□□□□ -1.83
NCAM1-229ENST00000621518 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms