RNA–Protein interactions for RNA: ENST00000621518.4

NCAM1-229, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 4,922 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-229ENST00000621518 NISCHQ9Y2I1 1504 aa19.99■□□□□ 0.79
NCAM1-229ENST00000621518 DCAF8L2P0C7V8 631 aa19.9■□□□□ 0.78
NCAM1-229ENST00000621518 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
NCAM1-229ENST00000621518 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
NCAM1-229ENST00000621518 FAM9AQ8IZU1 332 aaPredicted RBP18■□□□□ 0.47
NCAM1-229ENST00000621518 APLP2Q06481 763 aa17.82■□□□□ 0.44
NCAM1-229ENST00000621518 EHMT2Q96KQ7 1210 aa17.54■□□□□ 0.4
NCAM1-229ENST00000621518 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
NCAM1-229ENST00000621518 ABCC9O60706 1549 aa17.21■□□□□ 0.35
NCAM1-229ENST00000621518 UBTFP17480 764 aaKnown RBP17.19■□□□□ 0.34
NCAM1-229ENST00000621518 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
NCAM1-229ENST00000621518 RANGAP1P46060 587 aaPredicted RBP17.07■□□□□ 0.32
NCAM1-229ENST00000621518 PELP1Q8IZL8 1130 aaKnown RBP17.03■□□□□ 0.32
NCAM1-229ENST00000621518 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
NCAM1-229ENST00000621518 TTBK1Q5TCY1 1321 aaPredicted RBP16.92■□□□□ 0.3
NCAM1-229ENST00000621518 PABPN1Q86U42 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
NCAM1-229ENST00000621518 PCGF6Q9BYE7 350 aa16.81■□□□□ 0.28
NCAM1-229ENST00000621518 CCER1Q8TC90 406 aaPredicted RBP16.76■□□□□ 0.27
NCAM1-229ENST00000621518 CCDC180Q9P1Z9 1646 aa16.74■□□□□ 0.27
NCAM1-229ENST00000621518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
NCAM1-229ENST00000621518 HNRNPUL2Q1KMD3 747 aaKnown RBP16.72■□□□□ 0.27
NCAM1-229ENST00000621518 MYT1LQ9UL68 1186 aa16.63■□□□□ 0.25
NCAM1-229ENST00000621518 CHIC1Q5VXU3 224 aa16.62■□□□□ 0.25
NCAM1-229ENST00000621518 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
NCAM1-229ENST00000621518 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
NCAM1-229ENST00000621518 CENPBP07199 599 aaPredicted RBP16.48■□□□□ 0.23
NCAM1-229ENST00000621518 SCRIBQ14160 1630 aa16.46■□□□□ 0.23
NCAM1-229ENST00000621518 RB1CC1Q8TDY2 1594 aa16.43■□□□□ 0.22
NCAM1-229ENST00000621518 ITGAEP38570 1179 aa16.35■□□□□ 0.21
NCAM1-229ENST00000621518 PPARGC1BQ86YN6 1023 aaKnown RBP16.31■□□□□ 0.2
NCAM1-229ENST00000621518 NACADO15069 1562 aa16.3■□□□□ 0.2
NCAM1-229ENST00000621518 LOC105371045A0A1W2PR82 267 aa16.3■□□□□ 0.2
NCAM1-229ENST00000621518 FBLN2P98095 1184 aa16.3■□□□□ 0.2
NCAM1-229ENST00000621518 NEFLP07196 543 aa16.24■□□□□ 0.19
NCAM1-229ENST00000621518 CSRNP3Q8WYN3 585 aa16.19■□□□□ 0.18
NCAM1-229ENST00000621518 FAM50AQ14320 339 aaKnown RBP16.17■□□□□ 0.18
NCAM1-229ENST00000621518 CDK11AQ9UQ88 783 aaPredicted RBP16.16■□□□□ 0.18
NCAM1-229ENST00000621518 TRIM52Q96A61 297 aa16.08■□□□□ 0.16
NCAM1-229ENST00000621518 POLR3GLQ9BT43 218 aa16.06■□□□□ 0.16
NCAM1-229ENST00000621518 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
NCAM1-229ENST00000621518 NPM1P06748 294 aaKnown RBP eCLIP16.02■□□□□ 0.16
NCAM1-229ENST00000621518 ERICH6Q7L0X2 663 aa16.02■□□□□ 0.15
NCAM1-229ENST00000621518 SLC4A1APQ9BWU0 796 aaKnown RBP15.92■□□□□ 0.14
NCAM1-229ENST00000621518 HRCP23327 699 aa15.92■□□□□ 0.14
NCAM1-229ENST00000621518 BAZ1BQ9UIG0 1483 aaKnown RBP15.9■□□□□ 0.14
NCAM1-229ENST00000621518 P3H3Q8IVL6 736 aa15.9■□□□□ 0.14
NCAM1-229ENST00000621518 YTHDC1Q96MU7 727 aaKnown RBP15.88■□□□□ 0.13
NCAM1-229ENST00000621518 ESF1Q9H501 851 aaKnown RBP15.87■□□□□ 0.13
NCAM1-229ENST00000621518 CHMP7Q8WUX9 453 aaPredicted RBP15.86■□□□□ 0.13
NCAM1-229ENST00000621518 EEA1Q15075 1411 aa15.83■□□□□ 0.13
NCAM1-229ENST00000621518 BAZ1AQ9NRL2 1556 aaPredicted RBP15.82■□□□□ 0.12
NCAM1-229ENST00000621518 RSF1Q96T23 1441 aaPredicted RBP15.82■□□□□ 0.12
NCAM1-229ENST00000621518 ZNF777Q9ULD5 760 aaPredicted RBP15.8■□□□□ 0.12
NCAM1-229ENST00000621518 NEUROD1Q13562 356 aa15.78■□□□□ 0.12
NCAM1-229ENST00000621518 ARID3CA6NKF2 412 aa15.76■□□□□ 0.11
NCAM1-229ENST00000621518 BCANQ96GW7 911 aa15.72■□□□□ 0.11
NCAM1-229ENST00000621518 ACIN1Q9UKV3 1341 aaKnown RBP15.72■□□□□ 0.11
NCAM1-229ENST00000621518 MYO15BQ96JP2 1530 aa15.72■□□□□ 0.11
NCAM1-229ENST00000621518 ZNF326Q5BKZ1 582 aaKnown RBP15.7■□□□□ 0.1
NCAM1-229ENST00000621518 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
NCAM1-229ENST00000621518 WRNQ14191 1432 aaPredicted RBP eCLIP15.68■□□□□ 0.1
NCAM1-229ENST00000621518 DAXXQ9UER7 740 aaPredicted RBP15.67■□□□□ 0.1
NCAM1-229ENST00000621518 KIF27Q86VH2 1401 aa15.67■□□□□ 0.1
NCAM1-229ENST00000621518 TSPY4P0CV99 314 aa15.65■□□□□ 0.1
NCAM1-229ENST00000621518 TSPY10P0CW01 314 aa15.65■□□□□ 0.1
NCAM1-229ENST00000621518 CNGB1Q14028 1251 aaPredicted RBP15.65■□□□□ 0.1
NCAM1-229ENST00000621518 MTUS2Q5JR59 1369 aa15.64■□□□□ 0.09
NCAM1-229ENST00000621518 NEFMP07197 916 aa15.63■□□□□ 0.09
NCAM1-229ENST00000621518 STAG3Q9UJ98 1225 aa15.63■□□□□ 0.09
NCAM1-229ENST00000621518 ANP32CO43423 234 aa15.63■□□□□ 0.09
NCAM1-229ENST00000621518 DIEXFQ68CQ4 756 aaKnown RBP15.62■□□□□ 0.09
NCAM1-229ENST00000621518 SMARCA2P51531 1590 aa15.6■□□□□ 0.09
NCAM1-229ENST00000621518 GOLGA3Q08378 1498 aa15.59■□□□□ 0.09
NCAM1-229ENST00000621518 CLIP1P30622 1438 aa15.59■□□□□ 0.09
NCAM1-229ENST00000621518 PLEKHD1A6NEE1 506 aa15.58■□□□□ 0.09
NCAM1-229ENST00000621518 PDS5BQ9NTI5 1447 aa15.53■□□□□ 0.08
NCAM1-229ENST00000621518 TONSLQ96HA7 1378 aa15.53■□□□□ 0.08
NCAM1-229ENST00000621518 CEP164Q9UPV0 1460 aa15.51■□□□□ 0.07
NCAM1-229ENST00000621518 CHGAP10645 457 aaKnown RBP15.5■□□□□ 0.07
NCAM1-229ENST00000621518 ZNF316A6NFI3 1004 aaPredicted RBP15.48■□□□□ 0.07
NCAM1-229ENST00000621518 CECR2Q9BXF3 1484 aa15.47■□□□□ 0.07
NCAM1-229ENST00000621518 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
NCAM1-229ENST00000621518 CLSPNQ9HAW4 1339 aa15.45■□□□□ 0.06
NCAM1-229ENST00000621518 TNIKQ9UKE5 1360 aa15.42■□□□□ 0.06
NCAM1-229ENST00000621518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.41■□□□□ 0.06
NCAM1-229ENST00000621518 CHIC2Q9UKJ5 165 aa15.39■□□□□ 0.05
NCAM1-229ENST00000621518 KCNH8Q96L42 1107 aa15.39■□□□□ 0.05
NCAM1-229ENST00000621518 FHAD1B1AJZ9 1412 aa15.37■□□□□ 0.05
NCAM1-229ENST00000621518 CEP162Q5TB80 1403 aa15.37■□□□□ 0.05
NCAM1-229ENST00000621518 CFDP1Q9UEE9 299 aaPredicted RBP15.35■□□□□ 0.05
NCAM1-229ENST00000621518 CARMIL1Q5VZK9 1371 aa15.35■□□□□ 0.05
NCAM1-229ENST00000621518 CUX2O14529 1486 aa15.34■□□□□ 0.05
NCAM1-229ENST00000621518 MROH2BQ7Z745 1585 aa15.33■□□□□ 0.04
NCAM1-229ENST00000621518 CANXP27824 592 aaKnown RBP15.33■□□□□ 0.04
NCAM1-229ENST00000621518 SLC24A1O60721 1099 aa15.31■□□□□ 0.04
NCAM1-229ENST00000621518 CARMIL2Q6F5E8 1435 aa15.3■□□□□ 0.04
NCAM1-229ENST00000621518 CCDC88BA6NC98 1476 aa15.3■□□□□ 0.04
NCAM1-229ENST00000621518 CADPSQ9ULU8 1353 aa15.29■□□□□ 0.04
NCAM1-229ENST00000621518 PLPPR3Q6T4P5 718 aa15.29■□□□□ 0.04
NCAM1-229ENST00000621518 TOP2AP11388 1531 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms