RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 LRP1BQ9NZR2 4599 aa7.04□□□□□ -1.28
SYN2-205ENST00000620175 KRTAP15-1Q3LI76 137 aa7.03□□□□□ -1.28
SYN2-205ENST00000620175 DNAH3Q8TD57 4116 aa7.01□□□□□ -1.29
SYN2-205ENST00000620175 DNAH5Q8TE73 4624 aa7.01□□□□□ -1.29
SYN2-205ENST00000620175 MYCBP2O75592 4640 aa7□□□□□ -1.29
SYN2-205ENST00000620175 ALMS1Q8TCU4 4167 aa6.99□□□□□ -1.29
SYN2-205ENST00000620175 FAT1Q14517 4588 aa6.98□□□□□ -1.29
SYN2-205ENST00000620175 KRTAP3-2Q9BYR7 98 aa6.98□□□□□ -1.29
SYN2-205ENST00000620175 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
SYN2-205ENST00000620175 VPS13DQ5THJ4 4388 aa6.96□□□□□ -1.29
SYN2-205ENST00000620175 KIAA1109Q2LD37 5005 aa6.92□□□□□ -1.3
SYN2-205ENST00000620175 KMT2CQ8NEZ4 4911 aaKnown RBP6.9□□□□□ -1.3
SYN2-205ENST00000620175 DNAH2Q9P225 4427 aa6.89□□□□□ -1.31
SYN2-205ENST00000620175 DNAH6Q9C0G6 4158 aa6.89□□□□□ -1.31
SYN2-205ENST00000620175 KRTAP4-5Q9BYR2 181 aa6.89□□□□□ -1.31
SYN2-205ENST00000620175 HYDINQ4G0P3 5121 aa6.88□□□□□ -1.31
SYN2-205ENST00000620175 DYNC1H1Q14204 4646 aaKnown RBP6.85□□□□□ -1.31
SYN2-205ENST00000620175 RYR3Q15413 4870 aa6.81□□□□□ -1.32
SYN2-205ENST00000620175 VPS13BQ7Z7G8 4022 aa6.8□□□□□ -1.32
SYN2-205ENST00000620175 SACSQ9NZJ4 4579 aa6.78□□□□□ -1.32
SYN2-205ENST00000620175 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
SYN2-205ENST00000620175 RYR1P21817 5038 aa6.77□□□□□ -1.33
SYN2-205ENST00000620175 M0R2T5 61 aa6.77□□□□□ -1.33
SYN2-205ENST00000620175 HECTD4Q9Y4D8 3996 aa6.76□□□□□ -1.33
SYN2-205ENST00000620175 DYNC2H1Q8NCM8 4307 aaKnown RBP6.75□□□□□ -1.33
SYN2-205ENST00000620175 PKHD1P08F94 4074 aa6.75□□□□□ -1.33
SYN2-205ENST00000620175 TNP1P09430 55 aa6.71□□□□□ -1.34
SYN2-205ENST00000620175 KRTAP10-4P60372 401 aaPredicted RBP6.7□□□□□ -1.34
SYN2-205ENST00000620175 FAT3Q8TDW7 4589 aa6.68□□□□□ -1.34
SYN2-205ENST00000620175 RYR2Q92736 4967 aa6.68□□□□□ -1.34
SYN2-205ENST00000620175 APOBP04114 4563 aaKnown RBP6.65□□□□□ -1.34
SYN2-205ENST00000620175 MT1HL1P0DM35 61 aa6.62□□□□□ -1.35
SYN2-205ENST00000620175 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
SYN2-205ENST00000620175 LRP1Q07954 4544 aaKnown RBP6.61□□□□□ -1.35
SYN2-205ENST00000620175 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
SYN2-205ENST00000620175 KRTAP17-1Q9BYP8 105 aa6.56□□□□□ -1.36
SYN2-205ENST00000620175 FAT2Q9NYQ8 4349 aa6.53□□□□□ -1.36
SYN2-205ENST00000620175 EPPK1P58107 5090 aaKnown RBP6.52□□□□□ -1.37
SYN2-205ENST00000620175 HERC2O95714 4834 aa6.45□□□□□ -1.38
SYN2-205ENST00000620175 LRP2P98164 4655 aa6.39□□□□□ -1.39
SYN2-205ENST00000620175 PKD1P98161 4303 aa6.37□□□□□ -1.39
SYN2-205ENST00000620175 HSPG2P98160 4391 aa6.32□□□□□ -1.4
SYN2-205ENST00000620175 BIRC6Q9NR09 4857 aa6.26□□□□□ -1.41
SYN2-205ENST00000620175 ABCA13Q86UQ4 5058 aa6.24□□□□□ -1.41
SYN2-205ENST00000620175 KRTAP10-10P60014 251 aa6.17□□□□□ -1.42
SYN2-205ENST00000620175 LPAP08519 4548 aa6.11□□□□□ -1.43
SYN2-205ENST00000620175 HERC1Q15751 4861 aa6.1□□□□□ -1.43
SYN2-205ENST00000620175 KRTAP4-1Q9BYQ7 146 aa6.07□□□□□ -1.44
SYN2-205ENST00000620175 PCLOQ9Y6V0 5065 aa6.06□□□□□ -1.44
SYN2-205ENST00000620175 LCE3AQ5TA76 89 aa6□□□□□ -1.45
SYN2-205ENST00000620175 PRO2289Q9P1D8 64 aa5.99□□□□□ -1.45
SYN2-205ENST00000620175 RNF213Q63HN8 5207 aa5.98□□□□□ -1.45
SYN2-205ENST00000620175 MUC2Q02817 5179 aa5.93□□□□□ -1.46
SYN2-205ENST00000620175 PKHD1L1Q86WI1 4243 aa5.92□□□□□ -1.46
SYN2-205ENST00000620175 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
SYN2-205ENST00000620175 TNXBP22105 4242 aa5.84□□□□□ -1.48
SYN2-205ENST00000620175 INE1O15225 51 aa5.81□□□□□ -1.48
SYN2-205ENST00000620175 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
SYN2-205ENST00000620175 FAT4Q6V0I7 4981 aa5.71□□□□□ -1.5
SYN2-205ENST00000620175 KRTAP10-12P60413 245 aa5.71□□□□□ -1.5
SYN2-205ENST00000620175 FSIP2Q5CZC0 6907 aa5.7□□□□□ -1.5
SYN2-205ENST00000620175 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
SYN2-205ENST00000620175 MT1HP80294 61 aa5.64□□□□□ -1.51
SYN2-205ENST00000620175 HMCN2Q8NDA2 5059 aa5.63□□□□□ -1.51
SYN2-205ENST00000620175 SPRR5A0A1B0GTR4 108 aa5.57□□□□□ -1.52
SYN2-205ENST00000620175 OBSCNQ5VST9 7968 aa5.5□□□□□ -1.53
SYN2-205ENST00000620175 KRTAP19-1Q8IUB9 90 aa5.48□□□□□ -1.53
SYN2-205ENST00000620175 CRCT1Q9UGL9 99 aa5.48□□□□□ -1.53
SYN2-205ENST00000620175 MT2AP02795 61 aa5.48□□□□□ -1.53
SYN2-205ENST00000620175 MT1FP04733 61 aa5.46□□□□□ -1.54
SYN2-205ENST00000620175 SPRR2GQ9BYE4 73 aa5.46□□□□□ -1.54
SYN2-205ENST00000620175 LCE2CQ5TA81 110 aa5.44□□□□□ -1.54
SYN2-205ENST00000620175 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
SYN2-205ENST00000620175 MUC17Q685J3 4493 aa5.4□□□□□ -1.55
SYN2-205ENST00000620175 KRTAP19-2Q3LHN2 52 aa5.36□□□□□ -1.55
SYN2-205ENST00000620175 KRTAP10-7P60409 375 aaPredicted RBP5.36□□□□□ -1.55
SYN2-205ENST00000620175 SYNE1Q8NF91 8797 aaKnown RBP5.32□□□□□ -1.56
SYN2-205ENST00000620175 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
SYN2-205ENST00000620175 FLGP20930 4061 aaPredicted RBP5.28□□□□□ -1.56
SYN2-205ENST00000620175 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
SYN2-205ENST00000620175 MT1XP80297 61 aa5.22□□□□□ -1.57
SYN2-205ENST00000620175 KRTAP10-5P60370 271 aa5.22□□□□□ -1.57
SYN2-205ENST00000620175 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
SYN2-205ENST00000620175 KMT2DO14686 5537 aa5.17□□□□□ -1.58
SYN2-205ENST00000620175 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
SYN2-205ENST00000620175 KRTAP4-8Q9BYQ9 185 aa5.16□□□□□ -1.58
SYN2-205ENST00000620175 USH2AO75445 5202 aa5.15□□□□□ -1.59
SYN2-205ENST00000620175 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
SYN2-205ENST00000620175 MT1BP07438 61 aa5.13□□□□□ -1.59
SYN2-205ENST00000620175 DSTQ03001 7570 aaKnown RBP5.08□□□□□ -1.6
SYN2-205ENST00000620175 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
SYN2-205ENST00000620175 FCGBPQ9Y6R7 5405 aaPredicted RBP5.03□□□□□ -1.6
SYN2-205ENST00000620175 KRTAP19-8Q3LI54 63 aa5.02□□□□□ -1.61
SYN2-205ENST00000620175 LCE2BO14633 110 aa5.02□□□□□ -1.61
SYN2-205ENST00000620175 LCE2AQ5TA79 106 aaPredicted RBP5.01□□□□□ -1.61
SYN2-205ENST00000620175 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
SYN2-205ENST00000620175 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.64
SYN2-205ENST00000620175 KRTAP9-2Q9BYQ4 174 aa4.8□□□□□ -1.64
SYN2-205ENST00000620175 MT1GP13640 62 aa4.8□□□□□ -1.64
SYN2-205ENST00000620175 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms