RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 KRTAP4-5Q9BYR2 181 aa1.5□□□□□ -2.17
NEB-220ENST00000618972 DYNC1H1Q14204 4646 aaKnown RBP1.5□□□□□ -2.17
NEB-220ENST00000618972 FAT3Q8TDW7 4589 aa1.5□□□□□ -2.17
NEB-220ENST00000618972 DNAH3Q8TD57 4116 aa1.5□□□□□ -2.17
NEB-220ENST00000618972 LRP1BQ9NZR2 4599 aa1.5□□□□□ -2.17
NEB-220ENST00000618972 KRTAP12-1P59990 96 aa1.5□□□□□ -2.17
NEB-220ENST00000618972 ANK2Q01484 3957 aa1.49□□□□□ -2.17
NEB-220ENST00000618972 DNAH9Q9NYC9 4486 aa1.49□□□□□ -2.17
NEB-220ENST00000618972 DYNC2H1Q8NCM8 4307 aaKnown RBP1.48□□□□□ -2.17
NEB-220ENST00000618972 FBN1P35555 2871 aaKnown RBP1.48□□□□□ -2.17
NEB-220ENST00000618972 DMDP11532 3685 aa1.48□□□□□ -2.17
NEB-220ENST00000618972 CUBNO60494 3623 aa1.48□□□□□ -2.17
NEB-220ENST00000618972 DNAH8Q96JB1 4490 aa1.47□□□□□ -2.17
NEB-220ENST00000618972 MYCBP2O75592 4640 aa1.47□□□□□ -2.17
NEB-220ENST00000618972 LAMA5O15230 3695 aa1.46□□□□□ -2.18
NEB-220ENST00000618972 SPENQ96T58 3664 aaKnown RBP1.46□□□□□ -2.18
NEB-220ENST00000618972 DNAH7Q8WXX0 4024 aa1.45□□□□□ -2.18
NEB-220ENST00000618972 KRTAP4-1Q9BYQ7 146 aa1.45□□□□□ -2.18
NEB-220ENST00000618972 VPS13CQ709C8 3753 aa1.45□□□□□ -2.18
NEB-220ENST00000618972 TRRAPQ9Y4A5 3859 aa1.44□□□□□ -2.18
NEB-220ENST00000618972 FAT1Q14517 4588 aa1.44□□□□□ -2.18
NEB-220ENST00000618972 PRKDCP78527 4128 aaKnown RBP1.43□□□□□ -2.18
NEB-220ENST00000618972 KRTAP10-4P60372 401 aaPredicted RBP1.43□□□□□ -2.18
NEB-220ENST00000618972 PKHD1P08F94 4074 aa1.43□□□□□ -2.18
NEB-220ENST00000618972 LRP1Q07954 4544 aaKnown RBP1.43□□□□□ -2.18
NEB-220ENST00000618972 CSMD2Q7Z408 3487 aa1.42□□□□□ -2.18
NEB-220ENST00000618972 KRTAP10-10P60014 251 aa1.42□□□□□ -2.18
NEB-220ENST00000618972 VPS13BQ7Z7G8 4022 aa1.42□□□□□ -2.18
NEB-220ENST00000618972 BSNQ9UPA5 3926 aa1.4□□□□□ -2.18
NEB-220ENST00000618972 PKD1P98161 4303 aa1.4□□□□□ -2.18
NEB-220ENST00000618972 MT1HL1P0DM35 61 aa1.4□□□□□ -2.18
NEB-220ENST00000618972 MUC3AQ02505 3323 aa1.4□□□□□ -2.19
NEB-220ENST00000618972 SPRR5A0A1B0GTR4 108 aa1.39□□□□□ -2.19
NEB-220ENST00000618972 SYNE2Q8WXH0 6885 aaKnown RBP1.38□□□□□ -2.19
NEB-220ENST00000618972 CSMD3Q7Z407 3707 aa1.36□□□□□ -2.19
NEB-220ENST00000618972 HECTD4Q9Y4D8 3996 aa1.36□□□□□ -2.19
NEB-220ENST00000618972 KMT2AQ03164 3969 aa1.36□□□□□ -2.19
NEB-220ENST00000618972 BIRC6Q9NR09 4857 aa1.35□□□□□ -2.19
NEB-220ENST00000618972 FLGP20930 4061 aaPredicted RBP1.34□□□□□ -2.19
NEB-220ENST00000618972 FAT2Q9NYQ8 4349 aa1.34□□□□□ -2.19
NEB-220ENST00000618972 KRTAP12-3P60328 96 aa1.33□□□□□ -2.2
NEB-220ENST00000618972 LRP2P98164 4655 aa1.33□□□□□ -2.2
NEB-220ENST00000618972 LYSTQ99698 3801 aa1.33□□□□□ -2.2
NEB-220ENST00000618972 HMCN2Q8NDA2 5059 aa1.32□□□□□ -2.2
NEB-220ENST00000618972 ZNF469Q96JG9 3925 aaPredicted RBP1.32□□□□□ -2.2
NEB-220ENST00000618972 HSPG2P98160 4391 aa1.32□□□□□ -2.2
NEB-220ENST00000618972 PKHD1L1Q86WI1 4243 aa1.32□□□□□ -2.2
NEB-220ENST00000618972 HERC1Q15751 4861 aa1.31□□□□□ -2.2
NEB-220ENST00000618972 FSIP2Q5CZC0 6907 aa1.3□□□□□ -2.2
NEB-220ENST00000618972 RYR1P21817 5038 aa1.29□□□□□ -2.2
NEB-220ENST00000618972 DSTQ03001 7570 aaKnown RBP1.28□□□□□ -2.2
NEB-220ENST00000618972 TNXBP22105 4242 aa1.28□□□□□ -2.2
NEB-220ENST00000618972 PCLOQ9Y6V0 5065 aa1.27□□□□□ -2.21
NEB-220ENST00000618972 HERC2O95714 4834 aa1.27□□□□□ -2.21
NEB-220ENST00000618972 ABCA13Q86UQ4 5058 aa1.27□□□□□ -2.21
NEB-220ENST00000618972 RYR3Q15413 4870 aa1.27□□□□□ -2.21
NEB-220ENST00000618972 STARD9Q9P2P6 4700 aa1.26□□□□□ -2.21
NEB-220ENST00000618972 KRTAP19-2Q3LHN2 52 aa1.26□□□□□ -2.21
NEB-220ENST00000618972 MACF1Q9UPN3 7388 aaKnown RBP1.25□□□□□ -2.21
NEB-220ENST00000618972 HYDINQ4G0P3 5121 aa1.25□□□□□ -2.21
NEB-220ENST00000618972 LPAP08519 4548 aa1.24□□□□□ -2.21
NEB-220ENST00000618972 LCE3AQ5TA76 89 aa1.24□□□□□ -2.21
NEB-220ENST00000618972 KRTAP4-7Q9BYR0 210 aa1.24□□□□□ -2.21
NEB-220ENST00000618972 RYR2Q92736 4967 aa1.23□□□□□ -2.21
NEB-220ENST00000618972 LCE2CQ5TA81 110 aa1.23□□□□□ -2.21
NEB-220ENST00000618972 LCE3CQ5T5A8 94 aa1.23□□□□□ -2.21
NEB-220ENST00000618972 KRTAP8-1Q8IUC2 63 aa1.22□□□□□ -2.21
NEB-220ENST00000618972 EPPK1P58107 5090 aaKnown RBP1.22□□□□□ -2.21
NEB-220ENST00000618972 KRTAP10-5P60370 271 aa1.21□□□□□ -2.22
NEB-220ENST00000618972 OBSCNQ5VST9 7968 aa1.21□□□□□ -2.22
NEB-220ENST00000618972 KRTAP10-12P60413 245 aa1.21□□□□□ -2.22
NEB-220ENST00000618972 KMT2CQ8NEZ4 4911 aaKnown RBP1.21□□□□□ -2.22
NEB-220ENST00000618972 SPRR2GQ9BYE4 73 aa1.21□□□□□ -2.22
NEB-220ENST00000618972 KRTAP19-1Q8IUB9 90 aa1.2□□□□□ -2.22
NEB-220ENST00000618972 KRTAP10-7P60409 375 aaPredicted RBP1.2□□□□□ -2.22
NEB-220ENST00000618972 MT1FP04733 61 aa1.2□□□□□ -2.22
NEB-220ENST00000618972 KRTAP12-4P60329 112 aa1.2□□□□□ -2.22
NEB-220ENST00000618972 UBR4Q5T4S7 5183 aa1.19□□□□□ -2.22
NEB-220ENST00000618972 KRTAP4-8A0A0G2JLE6 195 aa1.19□□□□□ -2.22
NEB-220ENST00000618972 KRTAP4-8Q9BYQ9 185 aa1.19□□□□□ -2.22
NEB-220ENST00000618972 MT2AP02795 61 aa1.18□□□□□ -2.22
NEB-220ENST00000618972 KRTAP19-5Q3LI72 72 aa1.17□□□□□ -2.22
NEB-220ENST00000618972 KRTAP4-3Q9BYR4 195 aa1.16□□□□□ -2.22
NEB-220ENST00000618972 KRTAP9-8Q9BYQ0 159 aa1.15□□□□□ -2.22
NEB-220ENST00000618972 MT1BP07438 61 aa1.14□□□□□ -2.23
NEB-220ENST00000618972 LOC100996750A0A140TA64 210 aa1.14□□□□□ -2.23
NEB-220ENST00000618972 MT1XP80297 61 aa1.14□□□□□ -2.23
NEB-220ENST00000618972 MUC17Q685J3 4493 aa1.14□□□□□ -2.23
NEB-220ENST00000618972 MT1HP80294 61 aa1.13□□□□□ -2.23
NEB-220ENST00000618972 RNF213Q63HN8 5207 aa1.13□□□□□ -2.23
NEB-220ENST00000618972 KRTAP9-6A8MVA2 160 aa1.13□□□□□ -2.23
NEB-220ENST00000618972 CRCT1Q9UGL9 99 aa1.13□□□□□ -2.23
NEB-220ENST00000618972 NEBP20929 6669 aa1.13□□□□□ -2.23
NEB-220ENST00000618972 KRTAP9-3Q9BYQ3 159 aa1.12□□□□□ -2.23
NEB-220ENST00000618972 KRTAP4-9Q9BYQ8 210 aa1.11□□□□□ -2.23
NEB-220ENST00000618972 LCE2AQ5TA79 106 aaPredicted RBP1.11□□□□□ -2.23
NEB-220ENST00000618972 KIAA1109Q2LD37 5005 aa1.11□□□□□ -2.23
NEB-220ENST00000618972 LCE2BO14633 110 aa1.1□□□□□ -2.23
NEB-220ENST00000618972 LCE3DQ9BYE3 92 aa1.1□□□□□ -2.23
NEB-220ENST00000618972 LCE3EQ5T5B0 92 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms